BARC-PV_1.0_Chr01_8113670_T_G

Marker Overview

Name

Alias

BARCPV_1.0_Chr01_8113670_T_G
ss715647945
715647945

dbSNP ID

715647945

SNP Array ID

BARCBean6K_3:

BARC-PV_1.0_Chr01_8113670_T_G

Type

SNP

SNP Alleles

T/G

5' Flanking Sequence

ATTCCTCATTGCACCACACACCTAGCTATAGTACCGCTCTCCCTCAGCCCTTGAGTTAGG

3' Flanking Sequence

TCAAACCCAGCCTAACTATTTCAGGTAACTCTAATTGACAACAAACAATTCCATACCAGA

Species

Phaseolus vulgaris

Publication

[view all]

Contact

Qijian Song

References

External references for this genetic_marker


Database	Accession
dbSNP	715647945

Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:


Feature Name	Unique Name	Species	Type
ss715647945	ss715647945	Phaseolus vulgaris	marker_locus

Publications


Year	Publication
2015	Song Q, Jia G, Hyten DL, Jenkins J, Hwang EY, Schroeder SG, Osorno JM, Schmutz J, Jackson SA, McClean PE, Cregan PB. SNP Assay Development for Linkage Map Construction, Anchoring Whole-Genome Sequence, and Other Genetic and Genomic Applications in Common Bean. G3 (Bethesda, Md.). 2015 Aug 28; 5(11):2285-90.

Contact

Name

Details

Qijian Song

First name:	Qijian
Last name:	Song
Institution:	USDA-ARS
Address:	Beltsville, Maryland 20705
Country:	United States
Email:	Qijian.Song@ars.usda.gov
Last update:	Aug 2015

Libraries


Library Name	Type
BARCBean6K_1	SNP_chip
BARCBean6K_3	SNP_chip

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Bean-CAL96/[MLB-49-89A]-RIL	LG01	N/A	30.03	ss715647945	View

Sequence

>BARC-PV_1.0_Chr01_8113670_T_G ID=BARC-PV_1.0_Chr01_8113670_T_G|Name=BARC-PV_1.0_Chr01_8113670_T_G|organism=Phaseolus vulgaris|type=genetic_marker|length=121bp
ATTCCTCATTGCACCACACACCTAGCTATAGTACCGCTCTCCCTCAGCCC
TTGAGTTAGGKTCAAACCCAGCCTAACTATTTCAGGTAACTCTAATTGAC
AACAAACAATTCCATACCAGA