BARC-PV_1.0_Chr04_43584074_G_T

Marker Overview
NameBARC-PV_1.0_Chr04_43584074_G_T
dbSNP ID715649344
SNP Array ID
BARCBean6K_1:BARC-PV_1.0_Chr04_43584074_G_T
BARCBean6K_3:BARC-PV_1.0_Chr04_43584074_G_T
TypeSNP
SNP AllelesG/T
5' Flanking SequenceGAGAATCTCAGGAACTGTTTTGCTAACCTTACACTTTGATGTTCCTCCCACAGGGTCTAT
3' Flanking SequenceCCTATAAGTGCAGAAAACCCTAGGATGGTTTTAGCATAACCTTGTGCCACACAAAATGCA
SpeciesPhaseolus vulgaris
Publication[view all]
ContactQijian Song
Associated WithGWAS0000359
Contact
NameDetails
Qijian Song
First name:Qijian
Last name:Song
Institution:USDA-ARS
Address:Beltsville, Maryland 20705
Country:United States
Email:Qijian.Song@ars.usda.gov
Last update:Aug 2015
Libraries
Library NameType
BARCBean6K_1SNP_chip
BARCBean6K_3SNP_chip
References
External references for this genetic_marker
DatabaseAccession
dbSNP715649344
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr04supercontigChr04:43584074..43584074 .
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Bean-CAL96/[MLB-49-89A]-RILLG04N/A60.44ss715649344View
2Bean-IJR/AFR298-RILLG04N/A69.56ss715649344View
3Bean-DOR364/XAN176-F5:7-RILLG08bN/A11.5ss715649344View
4Bean-DOR476/SEL1309-F5:7-RILLG04N/A53.1ss715649344View
5Bean-DOR476/SEL1309-F5:7-RILLG08bN/A11.5ss715649344View
Sequence
>BARC-PV_1.0_Chr04_43584074_G_T ID=BARC-PV_1.0_Chr04_43584074_G_T; Name=BARC-PV_1.0_Chr04_43584074_G_T; organism=Phaseolus vulgaris; type=genetic_marker; length=121bp
GAGAATCTCAGGAACTGTTTTGCTAACCTTACACTTTGATGTTCCTCCCA
CAGGGTCTATKCCTATAAGTGCAGAAAACCCTAGGATGGTTTTAGCATAA
CCTTGTGCCACACAAAATGCA
Annotated Terms
The following terms have been associated with this genetic_marker:
Vocabulary: Pulse Trait Ontology
TermDefinition
156:Bacterial wilt resistanceBacterial wilt resistance