chickpea-LasseterxICC3996-F6-RIL

Map Overview


Name	chickpea-LasseterxICC3996-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	Lasseter
Paternal parent	ICC3996
Population size	150
Number of loci	434
Number of QTL	4
Number of linkage groups	12
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

Lasseter_x_ICC3996-F6-RIL

population

Origin detail:	Australia
Population size:	150

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 434 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-LasseterxICC3996-F6-RIL.LG3	SNP_40000512	SNP_40000512	marker_locus	32.4 cM
chickpea-LasseterxICC3996-F6-RIL.LG3	SNP_40000513	SNP_40000513	marker_locus	32.4 cM
chickpea-LasseterxICC3996-F6-RIL.LG3	SNP_40000486	SNP_40000486	marker_locus	32.4 cM
chickpea-LasseterxICC3996-F6-RIL.LG3	SNP_40000511	SNP_40000511	marker_locus	32.4 cM
chickpea-LasseterxICC3996-F6-RIL.LG3	PBC_CA_00132	PBC_CA_00132	marker_locus	32.4 cM
chickpea-LasseterxICC3996-F6-RIL.LG3	SNP_40000485	SNP_40000485	marker_locus	32.4 cM
chickpea-LasseterxICC3996-F6-RIL.LG3	SNP_40000031	SNP_40000031	marker_locus	38.1 cM
chickpea-LasseterxICC3996-F6-RIL.LG3	SNP_40000021	SNP_40000021	marker_locus	38.1 cM
chickpea-LasseterxICC3996-F6-RIL.LG3	SNP_40000033	SNP_40000033	marker_locus	41.8 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40000874	SNP_40000874	marker_locus	0 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40000875	SNP_40000875	marker_locus	0 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40000923	SNP_40000923	marker_locus	1 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40001745	SNP_40001745	marker_locus	7 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40000528	SNP_40000528	marker_locus	9.8 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	TA89	TA89	marker_locus	9.8 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40000530	SNP_40000530	marker_locus	9.8 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40002562	SNP_40002562	marker_locus	10.1 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40002117	SNP_40002117	marker_locus	10.1 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40001479	SNP_40001479	marker_locus	10.1 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	PBC_CA_00343	PBC_CA_00343	marker_locus	10.1 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40001222	SNP_40001222	marker_locus	18.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40000849	SNP_40000849	marker_locus	21.5 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40002171	SNP_40002171	marker_locus	22.2 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40000182	SNP_40000182	marker_locus	22.2 cM
chickpea-LasseterxICC3996-F6-RIL.LG4.1	SNP_40000184	SNP_40000184	marker_locus	22.2 cM

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Map QTL

This map contains 4 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-LasseterxICC3996-F6-RIL.LG4.1	qABR.LasseterxICC3996-LG4.1.2005	QTL	35 cM	50 cM	-
chickpea-LasseterxICC3996-F6-RIL.LG4.1	qABR.LasseterxICC3996-LG4.2.2005	QTL	0 cM	2.7 cM	-
chickpea-LasseterxICC3996-F6-RIL.LG4.2	qABR.LasseterxICC3996-LG4.1.2009	QTL	35 cM	50 cM	-
chickpea-LasseterxICC3996-F6-RIL.LG4.2	qABR.LasseterxICC3996-LG4.2.2009	QTL	0 cM	2.7 cM	-

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