chickpea-S95362xHowzat-F6-RIL

Map Overview


Name	chickpea-S95362xHowzat-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	S95362
Paternal parent	Howzat
Population size	119
Number of loci	333
Number of QTL	2
Number of linkage groups	10
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

S95362_x_Howzat-F6-RIL

population

Origin detail:	Australia
Population size:	119

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 333 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002569	SNP_40002569	marker_locus	76.5 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002508	SNP_40002508	marker_locus	76.9 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000427	SNP_40000427	marker_locus	78.2 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001391	SNP_40001391	marker_locus	80.9 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000882	SNP_40000882	marker_locus	92.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002011	SNP_40002011	marker_locus	117.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002154	SNP_40002154	marker_locus	118.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000636	SNP_40000636	marker_locus	134.8 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001834	SNP_40001834	marker_locus	135.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	PBC_CA_00286	PBC_CA_00286	marker_locus	135.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001837	SNP_40001837	marker_locus	137.1 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001141	SNP_40001141	marker_locus	139.3 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002597	SNP_40002597	marker_locus	143.5 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001593	SNP_40001593	marker_locus	143.5 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002101	SNP_40002101	marker_locus	144.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001346	SNP_40001346	marker_locus	159.3 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40002447	SNP_40002447	marker_locus	0 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40000745	SNP_40000745	marker_locus	0.4 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001858	SNP_40001858	marker_locus	0.4 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001857	SNP_40001857	marker_locus	0.4 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001640	SNP_40001640	marker_locus	0.4 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001612	SNP_40001612	marker_locus	0.4 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001611	SNP_40001611	marker_locus	0.4 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001638	SNP_40001638	marker_locus	0.4 cM
chickpea-S95362xHowzat-F6-RIL.LG6	SNP_40001907	SNP_40001907	marker_locus	0.4 cM

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Map QTL

This map contains 2 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2005	QTL	51 cM	54 cM	-
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2009	QTL	51 cM	54 cM	-

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chickpea-S95362xHowzat-F6-RIL