chickpea-S95362xHowzat-F6-RIL

Map Overview


Name	chickpea-S95362xHowzat-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	S95362
Paternal parent	Howzat
Population size	119
Number of loci	333
Number of QTL	2
Number of linkage groups	10
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

S95362_x_Howzat-F6-RIL

population

Origin detail:	Australia
Population size:	119

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 333 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001419	SNP_40001419	marker_locus	26 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40002655	SNP_40002655	marker_locus	26 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	CaSTMS21	CaSTMS21	marker_locus	26.4 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001715	SNP_40001715	marker_locus	34 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	PBC_CA_00224	PBC_CA_00224	marker_locus	54.5 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40000666	SNP_40000666	marker_locus	54.5 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40002269	SNP_40002269	marker_locus	55.8 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001627	SNP_40001627	marker_locus	65.2 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40002472	SNP_40002472	marker_locus	66.1 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40002515	SNP_40002515	marker_locus	67 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001626	SNP_40001626	marker_locus	67.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001623	SNP_40001623	marker_locus	67.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001096	SNP_40001096	marker_locus	67.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40000944	SNP_40000944	marker_locus	67.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001097	SNP_40001097	marker_locus	67.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001625	SNP_40001625	marker_locus	67.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40000945	SNP_40000945	marker_locus	68.8 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40000489	SNP_40000489	marker_locus	75.1 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001332	SNP_40001332	marker_locus	81.4 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	TA127	TA127	marker_locus	83.8 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	TA116	TA116	marker_locus	84.4 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001708	SNP_40001708	marker_locus	84.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001637	SNP_40001637	marker_locus	84.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001191	SNP_40001191	marker_locus	84.9 cM
chickpea-S95362xHowzat-F6-RIL.LG1.1/5	SNP_40001721	SNP_40001721	marker_locus	84.9 cM

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Map QTL

This map contains 2 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2005	QTL	51 cM	54 cM	-
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2009	QTL	51 cM	54 cM	-

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chickpea-S95362xHowzat-F6-RIL