chickpea-S95362xHowzat-F6-RIL

Map Overview


Name	chickpea-S95362xHowzat-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	S95362
Paternal parent	Howzat
Population size	119
Number of loci	333
Number of QTL	2
Number of linkage groups	10
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

S95362_x_Howzat-F6-RIL

population

Origin detail:	Australia
Population size:	119

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 333 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40001882	SNP_40001882	marker_locus	53.5 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40001883	SNP_40001883	marker_locus	53.5 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40001881	SNP_40001881	marker_locus	53.5 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000810	SNP_40000810	marker_locus	55.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40002306	SNP_40002306	marker_locus	55.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40002354	SNP_40002354	marker_locus	61 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40001501	SNP_40001501	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40001648	SNP_40001648	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40002564	SNP_40002564	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000305	SNP_40000305	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000316	SNP_40000316	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000317	SNP_40000317	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000303	SNP_40000303	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000304	SNP_40000304	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40002096	SNP_40002096	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40002094	SNP_40002094	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000308	SNP_40000308	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000300	SNP_40000300	marker_locus	62.3 cM
chickpea-S95362xHowzat-F6-RIL.LG2.2	SNP_40000309	SNP_40000309	marker_locus	63.2 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000211	SNP_40000211	marker_locus	0 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40002675	SNP_40002675	marker_locus	2.2 cM
chickpea-S95362xHowzat-F6-RIL.LG3	CaSTMS28	CaSTMS28	marker_locus	3.7 cM
chickpea-S95362xHowzat-F6-RIL.LG3	TA135	TA135	marker_locus	4.7 cM
chickpea-S95362xHowzat-F6-RIL.LG3	CaM1020	CaM1020	marker_locus	5.2 cM
chickpea-S95362xHowzat-F6-RIL.LG3	CaSTMS10	CaSTMS10	marker_locus	6.2 cM

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Map QTL

This map contains 2 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2005	QTL	51 cM	54 cM	-
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2009	QTL	51 cM	54 cM	-

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chickpea-S95362xHowzat-F6-RIL