chickpea-S95362xHowzat-F6-RIL

Map Overview


Name	chickpea-S95362xHowzat-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	S95362
Paternal parent	Howzat
Population size	119
Number of loci	333
Number of QTL	2
Number of linkage groups	10
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

S95362_x_Howzat-F6-RIL

population

Origin detail:	Australia
Population size:	119

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 333 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40001201	SNP_40001201	marker_locus	12.5 cM
chickpea-S95362xHowzat-F6-RIL.LG3	NCPGR141	NCPGR141	marker_locus	14.8 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000579	SNP_40000579	marker_locus	15.2 cM
chickpea-S95362xHowzat-F6-RIL.LG3	TA142	TA142	marker_locus	20.2 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40002510	SNP_40002510	marker_locus	23.1 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000208	SNP_40000208	marker_locus	23.5 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000214	SNP_40000214	marker_locus	23.5 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000209	SNP_40000209	marker_locus	23.5 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40002027	SNP_40002027	marker_locus	30.3 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40002028	SNP_40002028	marker_locus	32.1 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000484	SNP_40000484	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000510	SNP_40000510	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000803	SNP_40000803	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40001584	SNP_40001584	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40001011	SNP_40001011	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000513	SNP_40000513	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000512	SNP_40000512	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000511	SNP_40000511	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000487	SNP_40000487	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000804	SNP_40000804	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000514	SNP_40000514	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000486	SNP_40000486	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000536	SNP_40000536	marker_locus	33 cM
chickpea-S95362xHowzat-F6-RIL.LG3	TA64	TA64	marker_locus	34.6 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40002362	SNP_40002362	marker_locus	37.4 cM

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Map QTL

This map contains 2 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2005	QTL	51 cM	54 cM	-
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2009	QTL	51 cM	54 cM	-

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chickpea-S95362xHowzat-F6-RIL