chickpea-S95362xHowzat-F6-RIL

Map Overview


Name	chickpea-S95362xHowzat-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	S95362
Paternal parent	Howzat
Population size	119
Number of loci	333
Number of QTL	2
Number of linkage groups	10
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

S95362_x_Howzat-F6-RIL

population

Origin detail:	Australia
Population size:	119

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 333 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000021	SNP_40000021	marker_locus	43.1 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000031	SNP_40000031	marker_locus	43.1 cM
chickpea-S95362xHowzat-F6-RIL.LG3	SNP_40000612	SNP_40000612	marker_locus	64.6 cM
chickpea-S95362xHowzat-F6-RIL.LG3	TA76	TA76	marker_locus	80.6 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000642	SNP_40000642	marker_locus	0 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002577	SNP_40002577	marker_locus	0 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000726	SNP_40000726	marker_locus	0.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001669	SNP_40001669	marker_locus	2.2 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000874	SNP_40000874	marker_locus	10.6 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000875	SNP_40000875	marker_locus	10.6 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000923	SNP_40000923	marker_locus	13.3 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001819	SNP_40001819	marker_locus	22.1 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001817	SNP_40001817	marker_locus	22.1 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001307	SNP_40001307	marker_locus	25.8 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002433	SNP_40002433	marker_locus	25.8 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000752	SNP_40000752	marker_locus	33.1 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002171	SNP_40002171	marker_locus	35.3 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001801	SNP_40001801	marker_locus	35.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001463	SNP_40001463	marker_locus	35.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002071	SNP_40002071	marker_locus	43 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001527	SNP_40001527	marker_locus	43.9 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001235	SNP_40001235	marker_locus	44.8 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002423	SNP_40002423	marker_locus	44.8 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001385	SNP_40001385	marker_locus	45.2 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002271	SNP_40002271	marker_locus	45.2 cM

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Map QTL

This map contains 2 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2005	QTL	51 cM	54 cM	-
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2009	QTL	51 cM	54 cM	-

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chickpea-S95362xHowzat-F6-RIL