chickpea-S95362xHowzat-F6-RIL

Map Overview


Name	chickpea-S95362xHowzat-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	S95362
Paternal parent	Howzat
Population size	119
Number of loci	333
Number of QTL	2
Number of linkage groups	10
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

S95362_x_Howzat-F6-RIL

population

Origin detail:	Australia
Population size:	119

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 333 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001506	SNP_40001506	marker_locus	47.9 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000806	SNP_40000806	marker_locus	50.1 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002081	SNP_40002081	marker_locus	50.1 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001427	SNP_40001427	marker_locus	51 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001428	SNP_40001428	marker_locus	51 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002493	SNP_40002493	marker_locus	51.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000946	SNP_40000946	marker_locus	51.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002128	SNP_40002128	marker_locus	51.8 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002084	SNP_40002084	marker_locus	52.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	TA72	TA72	marker_locus	54.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	TA146	TA146	marker_locus	55.2 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001411	SNP_40001411	marker_locus	60.2 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000813	SNP_40000813	marker_locus	62.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000812	SNP_40000812	marker_locus	62.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000811	SNP_40000811	marker_locus	63.3 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001238	SNP_40001238	marker_locus	65 cM
chickpea-S95362xHowzat-F6-RIL.LG4	TA130	TA130	marker_locus	65.6 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40002474	SNP_40002474	marker_locus	66.2 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001529	SNP_40001529	marker_locus	69.3 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001748	SNP_40001748	marker_locus	69.3 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001487	SNP_40001487	marker_locus	69.7 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001505	SNP_40001505	marker_locus	72.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000574	SNP_40000574	marker_locus	72.4 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40001785	SNP_40001785	marker_locus	76.1 cM
chickpea-S95362xHowzat-F6-RIL.LG4	SNP_40000426	SNP_40000426	marker_locus	76.5 cM

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Map QTL

This map contains 2 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2005	QTL	51 cM	54 cM	-
chickpea-S95362xHowzat-F6-RIL.LG4	qABR.S95362xHowzat-LG4.2009	QTL	51 cM	54 cM	-

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chickpea-S95362xHowzat-F6-RIL