Cowpea-UCR_MAGIC_2018-MAGIC

Map Overview

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NameCowpea-UCR_MAGIC_2018-MAGIC
SpeciesVigna unguiculata
Map typegenetic
Population typeMAGIC
Population size305
CommentsMAGIC: multi-parent advanced generation intercross
Map unitcM
Population size305
Number of loci32130
Number of QTL17
Number of linkage groups11
Publication[view all]
ContactBao-Lam Huynh
Map QTL
This map contains 17 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Cowpea-UCR_MAGIC_2018-MAGIC.LG01qDFTFL.UCR_MAGIC_2018.LG01.CVARSQTL54 cM68 cM56 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG04qDFTFL.UCR_MAGIC_2018.LG04.CESQTL16 cM20 cM19 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG04qDFTFL.UCR_MAGIC_2018.LG04.CVARSQTL15 cM27 cM20 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG05qDFTFL.UCR_MAGIC_2018.LG05.CESQTL1 cM9 cM7 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG05qDFTFL.UCR_MAGIC_2018.LG05.CVARSQTL5 cM12 cM8 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG09qDFTFL.UCR_MAGIC_2018.LG09.CESQTL23 cM28 cM25 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG09qDFTFL.UCR_MAGIC_2018.LG09.CVARSQTL7 cM13 cM10 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG11qDFTFL.UCR_MAGIC_2018.LG11.CESQTL47 cM59 cM50 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG02qDM.UCR_MAGIC_2018.LG02.CVARSQTL37 cM48 cM45 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG05qDM.UCR_MAGIC_2018.LG05.CVARSQTL5 cM19 cM10 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG05qDM.UCR_MAGIC_2018.LG05.CVARS.2QTL7 cM18 cM10 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG09qDM.UCR_MAGIC_2018.LG09.CVARSQTL4 cM13 cM10 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01qGH.UCR_MAGIC_2018.LG01.CESQTL54 cM61 cM58 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01qGH.UCR_MAGIC_2018.LG01.CVARSQTL59 cM63 cM61 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG09qGH.UCR_MAGIC_2018.LG09.CESQTL22 cM28 cM24 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG06qSDSZ.UCR_MAGIC_2018.LG06.CVARSQTL74 cM80 cM79 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG08qSDSZ.UCR_MAGIC_2018.LG08.CVARSQTL73 cM78 cM75 cM
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Contact
NameDetails
Bao-Lam Huynh
First name:Bao-Lam
Last name:Huynh
Institution:University of California Riverside
Country:United States
Email:baolam.huynh@ucr.edu
Last update:Oct 2015
Stock
NameTypeDetails
UCR_MAGIC_2018population
Population size:305
Comments:MAGIC: multi-parent advanced generation intercross
Publication
YearPublications
2018Huynh BL, Ehlers JD, Huang BE, Muñoz-Amatriaín M, Lonardi S, Santos JRP, Ndeve A, Batieno BJ, Boukar O, Cisse N, Drabo I, Fatokun C, Kusi F, Agyare RY, Guo YN, Herniter I, Lo S, Wanamaker SI, Xu S, Close TJ, Roberts PA. A multi-parent advanced generation inter-cross (MAGIC) population for genetic analysis and improvement of cowpea (Vigna unguiculata L. Walp.). The Plant journal : for cell and molecular biology. 2018 03; 93(6):1129-1142.
Map Loci
This map contains 32,130 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_347032_34703marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_452502_45250marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_342312_34231marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_347032_34703marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_394752_39475marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_394752_39475marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-1_000521_0052marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_342312_34231marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-1_000521_0052marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_299742_29974marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-1_000541_0054marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_317632_31763marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-1_000541_0054marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_329412_32941marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_329412_32941marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_297882_29788marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_297882_29788marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR09-2_342312_34231marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_299742_29974marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_039032_03903marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_329422_32942marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_339972_33997marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_339972_33997marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR16-2_317632_31763marker_locus0 cM
Cowpea-UCR_MAGIC_2018-MAGIC.LG01Vu_UCR15-2_452502_45250marker_locus0 cM
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