Chickpea-ICC4958_x_ICC1882-RIL-2018

Map Overview


Name	Chickpea-ICC4958_x_ICC1882-RIL-2018
Species	Cicer arietinum
Population type	RIL
Population size	232
Map type	genetic
Map unit	cM
Maternal parent	ICC 4958
Paternal parent	ICC 1882
Number of loci	129
Number of QTL	65
Number of linkage groups	8
Publication	[view all]
Contact	Rajeev Kumar Varshney

Map QTL

This map contains 65 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG01	q3DLFA.ICC4958_x_ICC1882.LG1	QTL	-	-	35 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG03	q3DLFA.ICC4958_x_ICC1882.LG3	QTL	-	-	1 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG05	q3DLFAGRATE.ICC4958_x_ICC1882.LG5	QTL	-	-	7 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG01	qPLHGT.ICC4958_x_ICC1882.LG1.1	QTL	-	-	179 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG01	qPLHGT.ICC4958_x_ICC1882.LG1.2	QTL	-	-	93 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG02	qPLHGT.ICC4958_x_ICC1882.LG2.1	QTL	-	-	1 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG02	qPLHGT.ICC4958_x_ICC1882.LG2.2	QTL	-	-	77 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG02	qPLHGT.ICC4958_x_ICC1882.LG2.3	QTL	-	-	77 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG02	qPLHGT.ICC4958_x_ICC1882.LG2.4	QTL	-	-	2 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG02	qPLHGT.ICC4958_x_ICC1882.LG2.5	QTL	-	-	1 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG03	qPLHGT.ICC4958_x_ICC1882.LG3.1	QTL	-	-	79 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG03	qPLHGT.ICC4958_x_ICC1882.LG3.2	QTL	-	-	69 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG03	qPLHGT.ICC4958_x_ICC1882.LG3.3	QTL	-	-	69 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG05	qPLHGT.ICC4958_x_ICC1882.LG5	QTL	-	-	114 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG05	qSHWT.ICC4958_x_ICC1882.LG5.1	QTL	-	-	57 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG05	qSHWT.ICC4958_x_ICC1882.LG5.2	QTL	-	-	13 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG03	qSLFAR.ICC4958_x_ICC1882.LG3	QTL	-	-	80 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG05	qSLWT.ICC4958_x_ICC1882.LG5	QTL	-	-	113 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG01	qLFAI.ICC4958_x_ICC1882.LG1	QTL	-	-	7 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG05	qET.ICC4958_x_ICC1882.LG5	QTL	-	-	54 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG03	qETR.ICC4958_x_ICC1882.LG3	QTL	-	-	50 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG05	qT.ICC4958_x_ICC1882.LG5	QTL	-	-	59 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG01	qTR.ICC4958_x_ICC1882.LG1.1	QTL	-	-	178 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG01	qTR.ICC4958_x_ICC1882.LG1.2	QTL	-	-	8 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG02	qTR.ICC4958_x_ICC1882.LG2	QTL	-	-	11 cM

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Contact

Name

Details

Rajeev Kumar Varshney

First name:	Rajeev Kumar
Last name:	Varshney
Title:	Researcher
Institution:	International Crops Research Institute for the Semi-Arid Tropics (ICRISAT)
Address:	nternational Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, Andhra Pradesh, India
Country:	India
Email:	r.k.varshney@cgiar.org

Stock

Name

Type

Details

ICC4958_x_ICC1882

population

Publication


Year	Publications
2018	Sivasakthi K, Thudi M, Tharanya M, Kale SM, Kholová J, Halime MH, Jaganathan D, Baddam R, Thirunalasundari T, Gaur PM, Varshney RK, Vadez V. Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome. BMC plant biology. 2018 Feb 06; 18(1):29.

Map Loci

This map contains 129 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	cpPb678284	cpPb678284	marker_locus	0 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	cpPb490776	cpPb490776	marker_locus	0.02 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	CaM0615	CaM0615	marker_locus	6.68 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	CaM0845	CaM0845	marker_locus	7.86 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	CaM0856	CaM0856	marker_locus	8.11 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	CaM0821	CaM0821	marker_locus	8.84 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	GA137	GA137	marker_locus	11.73 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	ICCM0257	ICCM0257	marker_locus	19.6 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	ICCM0065	ICCM0065	marker_locus	24.82 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	CaM1684	CaM1684	marker_locus	34.2 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	H1A19	H1A19	marker_locus	35.73 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	NCPGR231	NCPGR231	marker_locus	35.92 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	H4G11	H4G11	marker_locus	36.06 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	TR20	TR20	marker_locus	37.03 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	H1B17	H1B17	marker_locus	37.99 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	ICCM0068	ICCM0068	marker_locus	38.45 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	ICCM0250	ICCM0250	marker_locus	38.58 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	ICCM0069	ICCM0069	marker_locus	38.83 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	NCPGR7	NCPGR7	marker_locus	38.93 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	NCPGR27	NCPGR27	marker_locus	39.09 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	CaM0507	CaM0507	marker_locus	39.67 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	CaM2093	CaM2093	marker_locus	40.06 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	CaM0923	CaM0923	marker_locus	40.49 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	NCPGR31	NCPGR31	marker_locus	41.39 cM
Chickpea-ICC4958_x_ICC1882-RIL-2018.CaLG04	NCPGR30	NCPGR30	marker_locus	42.14 cM

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