Bean-CIAT_MAGIC_2020-F4:6

Map Overview

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NameBean-CIAT_MAGIC_2020-F4:6
SpeciesPhaseolus vulgaris
Map typegenetic
Population typeMAGIC-F4:6
Population size636
Map unitcM
Population size636
Number of loci5739
Number of QTL5
Number of linkage groups11
Publication[view all]
ContactBodo Raatz
Map QTL
This map contains 5 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Bean-CIAT_MAGIC_2020-F4:6.LG03qSCKT.CIAT_MAGIC_2020.LG03QTL--1.5 cM
Bean-CIAT_MAGIC_2020-F4:6.LG04qSCKT.CIAT_MAGIC_2020.LG04QTL--47 cM
Bean-CIAT_MAGIC_2020-F4:6.LG07qSCKT.CIAT_MAGIC_2020.LG07QTL--63.5 cM
Bean-CIAT_MAGIC_2020-F4:6.LG08qSCKT.CIAT_MAGIC_2020.LG08QTL--77 cM
Bean-CIAT_MAGIC_2020-F4:6.LG11qSWUP.CIAT_MAGIC_2020.LG11QTL--75 cM
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Contact
NameDetails
Bodo Raatz
First name:Bodo
Last name:Raatz
Institution:International Center for Tropical Agriculture
Country:Columbia
Email:b.raatz@cgiar.org
Last update:Feb 2019
Stock
NameTypeDetails
CIAT_MAGIC_2020-F4:6population
Description:generated from eight Mesoamerican breeding lines representing the phenotypic and genotypic diversity of the CIAT Mesoamerican breeding program
Population size:636
Publication
YearPublications
2020Diaz S, Ariza-Suarez D, Ramdeen R, Aparicio J, Arunachalam N, Hernandez C, Diaz H, Ruiz H, Piepho HP, Raatz B. Genetic Architecture and Genomic Prediction of Cooking Time in Common Bean (Phaseolus vulgaris L.).. Frontiers in plant science. 2020; 11:622213.
Map Loci
This map contains 5,739 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_72790_C/TPv2.1_01_72790_C/Tmarker_locus0 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_17920_A/GPv2.1_01_17920_A/Gmarker_locus0 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_83073_C/APv2.1_01_83073_C/Amarker_locus0.04 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_105854_C/TPv2.1_01_105854_C/Tmarker_locus0.12 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_105860_G/TPv2.1_01_105860_G/Tmarker_locus0.24 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_113897_A/TPv2.1_01_113897_A/Tmarker_locus0.28 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_147928_C/TPv2.1_01_147928_C/Tmarker_locus0.44 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_157377_C/TPv2.1_01_157377_C/Tmarker_locus0.56 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_167691_C/TPv2.1_01_167691_C/Tmarker_locus0.6 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_169385_A/TPv2.1_01_169385_A/Tmarker_locus0.64 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_174264_A/GPv2.1_01_174264_A/Gmarker_locus0.84 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_210297_A/GPv2.1_01_210297_A/Gmarker_locus1.44 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_213720_G/APv2.1_01_213720_G/Amarker_locus1.64 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_227201_A/GPv2.1_01_227201_A/Gmarker_locus1.76 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_256681_G/TPv2.1_01_256681_G/Tmarker_locus2.04 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_445835_A/CPv2.1_01_445835_A/Cmarker_locus2.93 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_445847_C/TPv2.1_01_445847_C/Tmarker_locus3.09 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_446205_G/TPv2.1_01_446205_G/Tmarker_locus3.13 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_450536_A/TPv2.1_01_450536_A/Tmarker_locus3.25 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_452055_A/TPv2.1_01_452055_A/Tmarker_locus3.37 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_495797_T/CPv2.1_01_495797_T/Cmarker_locus4.1 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_495817_T/APv2.1_01_495817_T/Amarker_locus4.26 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_499112_G/TPv2.1_01_499112_G/Tmarker_locus4.26 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_508196_C/TPv2.1_01_508196_C/Tmarker_locus4.3 cM
Bean-CIAT_MAGIC_2020-F4:6.LG01Pv2.1_01_599157_G/CPv2.1_01_599157_G/Cmarker_locus4.34 cM
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