Common Vetch, Valuable Germplasm for Resilient Agriculture: Genetic Characterization and Spanish Core Collection Development.

Publication Overview
TitleCommon Vetch, Valuable Germplasm for Resilient Agriculture: Genetic Characterization and Spanish Core Collection Development.
AuthorsDe la Rosa L, López-Román MI, González JM, Zambrana E, Marcos-Prado T, Ramírez-Parra E
TypeJournal Article
Journal NameFrontiers in plant science
Volume12
Year2021
Page(s)617873
CitationDe la Rosa L, López-Román MI, González JM, Zambrana E, Marcos-Prado T, Ramírez-Parra E. Common Vetch, Valuable Germplasm for Resilient Agriculture: Genetic Characterization and Spanish Core Collection Development.. Frontiers in plant science. 2021; 12:617873.

Abstract

Common vetch (Vicia sativa L.) is a legume used for animal feed because of its high protein content and great capacity for nitrogen fixation, making this crop relevant in sustainable agriculture. The Spanish vetch collection, conserved at the Spanish Plant Genetic Resources Center (CRF), is one of the largest collections of this species worldwide, including landraces, wild relatives mainly collected in Spain, and commercial cultivars, but also accessions of international origin. The analysis of the genetic diversity of this material, whose genome has not been sequenced yet, and the assembly of a representative collection could play a pivotal role in conserving and exploiting these genetic resources in breeding programs mainly in those focused on consequences and demands of climate change. In this work, a set of 14 simple sequence repeat (SSR) reference alleles for genetic diversity analysis of the CRF vetch collection has been developed, used for genotyping more than 545 common vetch accessions from all over the world and validated. All the tested markers were polymorphic for the analyzed accessions. Overall, at least 86 different loci were identified with 2-11 alleles per locus with an average of 6.1 alleles per locus. Also, the analyses of the generated SSR database support that most of these SSR markers are transferable across closely related species of Vicia genus. Analysis of molecular variance revealed that wild relatives have a higher genetic diversity than landraces. However, cultivars have similar diversity than landraces, indicating that genetic variability has been barely lost due to the breeding of this legume. Low differences of genetic variations between Spanish and non-Spanish accessions have been observed, suggesting a high degree of diversity within Spanish genotypes, which provide 95% of the total genetic variation, so we have focused our efforts on characterizing genotypes of Spanish origin that were further studied using storage protein profiles. Based on SSR, seed protein profiles, and agromorphological and passport data, a vetch core collection (VCC) containing 47 V. sativa accessions of Spanish origin has been established. In this collection, the characterization has been expanded using ISSR markers, and it has been reevaluated with new agromorphological data, including drought tolerance characters. This VCC presents a minimum loss of genetic diversity concerning the total collection and constitutes an invaluable material that can be used in future breeding programs for direct use in a resilient agricultural system.

Features
This publication contains information about 14 features:
Feature NameUniquenameType
UPM21_Vs-SSR-310UPM21_Vs-SSR-310genetic_marker
UPM21_Vs-SSR-102UPM21_Vs-SSR-102genetic_marker
UPM21_Vs-SSR-179UPM21_Vs-SSR-179genetic_marker
UPM21_Vs-SSR-185UPM21_Vs-SSR-185genetic_marker
UPM21_Vs-SSR-073UPM21_Vs-SSR-073genetic_marker
UPM21_Vs-SSR-140UPM21_Vs-SSR-140genetic_marker
UPM21_Vs-SSR-217UPM21_Vs-SSR-217genetic_marker
UPM21_Vs-SSR-129UPM21_Vs-SSR-129genetic_marker
UPM21_Vs-SSR-138UPM21_Vs-SSR-138genetic_marker
UPM21_Vs-SSR-115UPM21_Vs-SSR-115genetic_marker
UPM21_Vs-SSR-439OUPM21_Vs-SSR-439Ogenetic_marker
UPM21_Vs-SSR-1393PUPM21_Vs-SSR-1393Pgenetic_marker
UPM21_Vs-SSR-4739SUPM21_Vs-SSR-4739Sgenetic_marker
UPM21_Vs-SSR-408NcUPM21_Vs-SSR-408Ncgenetic_marker
Properties
Additional details for this publication include:
Property NameValue
Publication ModelElectronic-eCollection
ISSN1664-462X
pISSN1664-462X
Publication Date2021
Journal AbbreviationFront Plant Sci
DOI10.3389/fpls.2021.617873
Elocation10.3389/fpls.2021.617873
CopyrightCopyright © 2021 De la Rosa, López-Román, González, Zambrana, Marcos-Prado and Ramírez-Parra.
LanguageEnglish
Language Abbreng
Publication TypeJournal Article
Journal CountrySwitzerland