Lens culinaris CDC Redberry genome v2.0

Genome Overview
Analysis NameLens culinaris CDC Redberry genome v2.0
MethodPacBio, Oxford Nanopore, Illumina, HiC (Assembly with SALSA, Irys-scaffolding, ALLHiC)
SourceKnowPulse
Date performed2022-01-31

This assembly and annotation was provided by the authors before publication. The article is currently available on bioRxiv: Ramsay, L., Koh, C. S., Kagale, S., Gao, D., Kaur, S., Haile, T., ... & Bett, K. E. (2021). Genomic rearrangements have consequences for introgression breeding as revealed by genome assemblies of wild and cultivated lentil species.

About the assembly:

Number of scaffolds 2,075
Total size  3.76 Gbp
N50 482 Mbp
Assembly BUSCO score (embryophyta_odb10) 95.1%
Annotation BUSCO score (embryophyta_odb10) 94.4%
Properties
Additional information about this analysis:
Property NameValue
JBrowse URLhttps://www.pulsedb.org/jbrowse/index.html?data=data%2Flentil%2FLc_CDCRedberry_v2.0&loc=
Analysis Typewhole_genome
Download

Lens culinaris CDC Redberry, Genome Assembly v2.0 Files:

The files will be available to downlaod after publication

 

Please see the PCD Data Repository for data available on PCD, or click on links below.

Homology Analysis Results: