LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1

Overview
Library NameLIBEST_026408 Chickpea drought stressed cDNA SSH library AB1
Unique NameLIBEST_026408
OrganismCicer arietinum (chickpea)
Typecdna_library
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1
  • Cultivar: ICC4958 and ICC1882
  • Tissue: Root
  • Developmental stage: Flowering stage
  • Vector: pGEM-T Easy vector
  • Detail: Chickpea drought tolerant cultivar ICC4958 and susceptible cultivar ICCC1882 was used in this study. Plants were grown in pots under near normal optimal condition in glasshouse. Control plants (well watered) were maintained close to 80% field capacity by keeping the pot wet to that level every day by compensating for the loss due to transpiration and water stressed plants were exposed to gradual water stress by partly compensated for the water loss due to transpiration. Plant samples from the control (well watered) and stressed plants were harvested when the transpiration ratio reached to 0.1 in the water stressed plants. Total RNA from root tissue was isolated using Trizol reagent and mRNA was extracted from the total RNA using poly(A) tract mRNA Purification Kit (Promega). Forward SSH library was constructed using subtraction of cDNA synthesized from water stressed ICC4958 plants as tester and that from the water stressed ICC1882 plants as driver with the Clontech PCR-Select cDNA subtraction Kit (CLONTECH, USA) according to the manufacturer‘s protocol. Differentially expressed cDNAs were cloned in pGEMT-Easy vector and transformed into E.Coli. Sanger sequencing of the selected clones were done using universal sequencing primers T7, SP6 and M13.
SNP Chip Base
Array NameLIBEST_026408 Chickpea drought stressed cDNA SSH library AB1
OrganismCicer arietinum (chickpea)
Typecdna_library
Features
The following browser provides a quick view for new visitors. Use the searching mechanism to find specific features.
Feature NameUnique NameType
HO062182HO062182EST
HO062308HO062308EST
HO062393HO062393EST
HO062461HO062461EST
HO062564HO062564EST
HO062309HO062309EST
HO062356HO062356EST
HO062392HO062392EST
HO062406HO062406EST
HO062648HO062648EST
HO062258HO062258EST
HO062276HO062276EST
HO062294HO062294EST
HO062405HO062405EST
HO062539HO062539EST
HO062548HO062548EST
HO062584HO062584EST
HO062661HO062661EST
HO062228HO062228EST
HO062259HO062259EST
HO062277HO062277EST
HO062295HO062295EST
HO062332HO062332EST
HO062390HO062390EST
HO062404HO062404EST

Pages