GR396872

EST Overview
NameGR396872
Unique NameGR396872
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length158
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
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BLAST of GR396872 vs. TrEMBL
Match: B9GTQ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645017 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.240e-7
Identity = 28/35 (80.00%), Postives = 34/35 (97.14%), Query Frame = 1 
Query:    4 VNGSDGVFVTGGEFSQISEMNHLMVSDSMRYAILM 108
            VNG+DG++VTG EF+Q+SEMNHLMV+DSMRYAILM
Sbjct:   73 VNGADGLWVTG-EFAQLSEMNHLMVNDSMRYAILM 106
[Close]
BLAST of GR396872 vs. TrEMBL
Match: C6TF73_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.526e-7
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 RVNGSDGVFVTGGEFSQISEMNHLMVSDSMRYAILM 108
            + NGSDGV+V+G EF QISEMNHLMV+DSMRYAILM
Sbjct:   73 QANGSDGVWVSG-EFVQISEMNHLMVNDSMRYAILM 107
[Close]
BLAST of GR396872 vs. TAIR peptide
Match: AT5G35732.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:13897961-13898263 FORWARD LENGTH=100)

HSP 1 Score: 52.373 bits (124), Expect = 6.995e-8
Identity = 25/36 (69.44%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 RVNGSDGVFVTGGEFSQISEMNHLMVSDSMRYAILM 108
            RV+G+DG++V+G ++  ISE+NHLMVSDSMRYAILM
Sbjct:   66 RVSGTDGLWVSG-DYGSISEVNHLMVSDSMRYAILM 100
The following BLAST results are available for this feature:
BLAST of GR396872 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9GTQ8_POPTR3.240e-780.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6TF73_SOYBN5.526e-780.56Putative uncharacterized protein OS=Glycine max PE... [more]
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BLAST of GR396872 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G35732.16.995e-869.44| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR396872 ID=GR396872; Name=GR396872; organism=Cicer arietinum; type=EST; length=158bp
AGGGTAAATGGGTCTGATGGTGTATTTGTAACTGGTGGTGAATTTTCACA
AATTTCTGAAATGAATCATCTCATGGTAAGTGATAGCATGAGATATGCAA
TTTTGATGTAAATATCAATTGTTCTTTAGTGTTGGCTTCATTTCTCTCTT
GTCCTTCA
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