HO062294

EST Overview
NameHO062294
Unique NameHO062294
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length219
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of HO062294 vs. SwissProt
Match: GOGC6_ARATH (Golgin candidate 6 OS=Arabidopsis thaliana GN=GC6 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.122e-17
Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKLRGSSYSFTQQK*TINLLSALETIKLLLKGGSEADPGKDANKQTNKTVL 203
            Q+LLRET+G + +I ILKLRG +Y FTQQK T+NLLSALETI +L+ G ++ +PGKD+NK  N+TVL
Sbjct:  249 QILLRETMGFEPIISILKLRGITYKFTQQK-TVNLLSALETINMLIMGRADTEPGKDSNKLANRTVL 314          
BLAST of HO062294 vs. TrEMBL
Match: B9GIJ5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_797875 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.157e-20
Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKLRGSSYSFTQQK*TINLLSALETIKLLLKGGSEADPGKDANKQTNKTVL 203
            QVLLRET+G D++I ILKLRGS+YSFTQQK TINLLSALETI LLL GGSE+DPGKD NK TN+TVL
Sbjct:  250 QVLLRETLGFDAIISILKLRGSAYSFTQQK-TINLLSALETINLLLMGGSESDPGKDMNKLTNRTVL 315          
BLAST of HO062294 vs. TrEMBL
Match: B9S666_RICCO (Vesicle docking protein P115, putative OS=Ricinus communis GN=RCOM_1065070 PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.743e-20
Identity = 53/67 (79.10%), Postives = 61/67 (91.04%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKLRGSSYSFTQQK*TINLLSALETIKLLLKGGSEADPGKDANKQTNKTVL 203
            Q+LLRET+G D+LI ILKLRGS+YSFTQQK TINLLSALETI LL+ GGSEA+ GKDANK+TN+TVL
Sbjct:  244 QILLRETMGFDALISILKLRGSAYSFTQQK-TINLLSALETINLLILGGSEAEHGKDANKRTNQTVL 309          
BLAST of HO062294 vs. TrEMBL
Match: D7TXA9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_139.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000649001 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.668e-17
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKLRGSSYSFTQQK*TINLLSALETIKLLLKGGSEADPGKDANK-QTNKTVL 203
            Q+LLRET+G D LI ILKLRGS+YSFTQQK TINLLSALETI LLL GG EA+  KDAN+  TNKTVL
Sbjct:  241 QILLRETMGFDPLISILKLRGSTYSFTQQK-TINLLSALETINLLLMGGPEAESAKDANRLLTNKTVL 307          
BLAST of HO062294 vs. TrEMBL
Match: D7LPH8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484543 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.464e-15
Identity = 41/67 (61.19%), Postives = 56/67 (83.58%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKLRGSSYSFTQQK*TINLLSALETIKLLLKGGSEADPGKDANKQTNKTVL 203
            Q+LLRET+G + +I ILKLRG +Y +T+QK T+NLLSALETI +L+ GG++ +PGKD+NK  N+TVL
Sbjct:  249 QILLRETMGFEPIISILKLRGITYKYTKQK-TVNLLSALETINMLIMGGADTEPGKDSNKLANRTVL 314          
BLAST of HO062294 vs. TrEMBL
Match: Q2QP84_ORYSJ (Os12g0538900 protein OS=Oryza sativa subsp. japonica GN=Os12g0538900 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.618e-14
Identity = 45/69 (65.22%), Postives = 57/69 (82.61%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKL-RGSSYSFTQQK*TINLLSALETIKLLLK-GGSEADPGKDANKQTNKTVL 203
            Q+LL+ETIG D LI ILK+ RGS+++FTQQK T+NLL AL+T++LLL  GGS  +PGKDANK TN+T L
Sbjct:  263 QMLLKETIGFDPLIAILKIRRGSAFNFTQQK-TVNLLGALDTVELLLMGGGSSGEPGKDANKTTNQTAL 330          
BLAST of HO062294 vs. TrEMBL
Match: B8BMB4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38607 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.618e-14
Identity = 45/69 (65.22%), Postives = 57/69 (82.61%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKL-RGSSYSFTQQK*TINLLSALETIKLLLK-GGSEADPGKDANKQTNKTVL 203
            Q+LL+ETIG D LI ILK+ RGS+++FTQQK T+NLL AL+T++LLL  GGS  +PGKDANK TN+T L
Sbjct:  385 QMLLKETIGFDPLIAILKIRRGSAFNFTQQK-TVNLLGALDTVELLLMGGGSSGEPGKDANKTTNQTAL 452          
BLAST of HO062294 vs. TrEMBL
Match: A9TYU0_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199606 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.978e-12
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = -2
Query:    3 PPGQVLLRETIGLDSLILILKLR-GSSYSFTQQK*TINLLSALETIKLLLKGGSEADPGKDANKQTNKTVL 212
            P  Q+ LRET+GL  +  +LKLR GS+  FTQQK +INLL ALET+ LLL GG +A PGKDAN   N+T+L
Sbjct:  232 PSNQIFLRETLGLQCVAQLLKLRKGSADGFTQQK-SINLLCALETVALLLSGGPDAKPGKDANIVANQTLL 301          
BLAST of HO062294 vs. TrEMBL
Match: C5YPE0_SORBI (Putative uncharacterized protein Sb08g017190 OS=Sorghum bicolor GN=Sb08g017190 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.159e-10
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKL-RGSSYSFTQQK*TINLLSALETIKLLLKGGSEADPGKDANKQTNKTVL 203
            Q+LL+ET+G D LI ILK+ RGS+++FTQQK T+NLL AL T++LLL GG   + GK+ N   N+T L
Sbjct:  261 QMLLKETMGFDPLISILKIRRGSAFNFTQQK-TVNLLGALNTVELLLMGGPSGEAGKNGN-NANQTAL 326          
BLAST of HO062294 vs. TAIR peptide
Match: AT3G27530.1 (| Symbols: GC6, MAG4 | golgin candidate 6 | chr3:10193778-10199659 REVERSE LENGTH=914)

HSP 1 Score: 85.5001 bits (210), Expect = 7.350e-18
Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = -2
Query:    3 QVLLRETIGLDSLILILKLRGSSYSFTQQK*TINLLSALETIKLLLKGGSEADPGKDANKQTNKTVL 203
            Q+LLRET+G + +I ILKLRG +Y FTQQK T+NLLSALETI +L+ G ++ +PGKD+NK  N+TVL
Sbjct:  249 QILLRETMGFEPIISILKLRGITYKFTQQK-TVNLLSALETINMLIMGRADTEPGKDSNKLANRTVL 314          
The following BLAST results are available for this feature:
BLAST of HO062294 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
GOGC6_ARATH9.122e-1762.69Golgin candidate 6 OS=Arabidopsis thaliana GN=GC6 ... [more]
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BLAST of HO062294 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9GIJ5_POPTR1.157e-2080.60Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S666_RICCO5.743e-2079.10Vesicle docking protein P115, putative OS=Ricinus ... [more]
D7TXA9_VITVI2.668e-1776.47Whole genome shotgun sequence of line PN40024, sca... [more]
D7LPH8_ARALY1.464e-1561.19Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q2QP84_ORYSJ1.618e-1465.22Os12g0538900 protein OS=Oryza sativa subsp. japoni... [more]
B8BMB4_ORYSI1.618e-1465.22Putative uncharacterized protein OS=Oryza sativa s... [more]
A9TYU0_PHYPA1.978e-1259.15Predicted protein OS=Physcomitrella patens subsp. ... [more]
C5YPE0_SORBI3.159e-1055.88Putative uncharacterized protein Sb08g017190 OS=So... [more]
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BLAST of HO062294 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G27530.17.350e-1862.69| Symbols: GC6, MAG4 | golgin candidate 6 | chr3:1... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062294 ID=HO062294; Name=HO062294; organism=Cicer arietinum; type=EST; length=219bp
ACCAGAACTGTCTTGTTTGTCTGTTTATTAGCATCTTTCCCAGGATCGGC
CTCAGAACCTCCCTTTAGTAACAATTTAATGGTTTCTAATGCACTGAGTA
GATTGATTGTCTACTTTTGTTGAGTAAAAGAGTAAGAACTTCCTCTCAGC
TTCAAAATCAATATCAATGAATCAAGTCCTATAGTCTCTCTGAGTAGTAC
CTGCCCGGGCGGCCGCTCG
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