GR912219

EST Overview
NameGR912219
Unique NameGR912219
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length430
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR912219 vs. SwissProt
Match: GID2_ARATH (F-box protein GID2 OS=Arabidopsis thaliana GN=GID2 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 8.208e-8
Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 3
Query:  192 VKRSNSNSEMKRSLSSATNEDRKMKRVKESEPNDENCEEIDGVCEKNRGLASFDENMLFEVLKHVDAKTLAMSGCVNK 425
            +KRS ++S++     + TN  +KMK  +E        EEI        G ++ DEN+++EVLKHVDAKTLAMS CV+K
Sbjct:    1 MKRSTTDSDLAGDAHNETN--KKMKSTEE--------EEI--------GFSNLDENLVYEVLKHVDAKTLAMSSCVSK 60          
BLAST of GR912219 vs. TrEMBL
Match: C4T9C1_LOTJA (SLEEPY1a OS=Lotus japonicus GN=SLY1a PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.971e-14
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 3
Query:  219 MKRSLSSATNEDRKMKRVKESEPNDENCEEIDGVCEK--NRGLASFDENMLFEVLKHVDAKTLAMSGCVNKQ 428
            MKRSL S   EDRKMK+VK +E +D+  E  D VC K    GL  FD+N+LFEVLKHVDAK+LAM+GCVNKQ
Sbjct:    1 MKRSLPSG--EDRKMKKVKLAETDDDG-EGEDDVCGKIHGPGLGCFDDNLLFEVLKHVDAKSLAMAGCVNKQ 69          
BLAST of GR912219 vs. TrEMBL
Match: C6T4T3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.374e-12
Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 3
Query:  219 MKRSLSSATN----EDRKMKR-VKESEPNDENCEEIDGVCEKNRGLASFDENMLFEVLKHVDAKTLAMSGCVNKQ 428
            MKR LS + +    EDRKMK+  K  E  D+N E ++G       LA FD+N+LFEVLKHVDA+TLAMSGCVNKQ
Sbjct:    1 MKRPLSPSASGVNVEDRKMKKKAKAVENEDDNGERVEG-------LAHFDDNLLFEVLKHVDARTLAMSGCVNKQ 68          
BLAST of GR912219 vs. TrEMBL
Match: B9GNS7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816462 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.720e-8
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 3
Query:  219 MKRSLSSATNEDRKM--KRVKESEPNDENCEEIDGVCEKNRGLASFDENMLFEVLKHVDAKTLAMSGCVNKQ 428
            MKR L +      K+  K  K+    DEN EEI+       G  + DEN+LFEVLKHVDA+TL  + CV+KQ
Sbjct:    1 MKRPLDTDPGNQNKIDIKMKKKRYQEDENKEEIESAVNTGSGFMNLDENLLFEVLKHVDARTLGSAACVSKQ 72          
BLAST of GR912219 vs. TrEMBL
Match: B9MVW7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_740519 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.533e-7
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 3
Query:  219 MKRSLSSA----TNEDRKMKRVKESEPNDENCEEIDGVCEKNRGLASFDENMLFEVLKHVDAKTLAMSGCVNKQ 428
            MKR L +        D KMK+ +  E  +   EEI+       G  + DEN+LFEVLKHVDA+TL  + CV+KQ
Sbjct:    1 MKRPLDTGPEIHNKTDMKMKKKRHQEEGEIK-EEIESETNTGTGFMNLDENLLFEVLKHVDARTLGRASCVSKQ 73          
BLAST of GR912219 vs. TrEMBL
Match: C9E6H5_BRANA (SLY1 F-box protein OS=Brassica napus GN=SLY1 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.226e-7
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 3
Query:  219 MKRSLS-SATNEDRKMKRVKESEPNDENCEEIDGVCEKNRGLASFDENMLFEVLKHVDAKTLAMSGCVNK 425
            MKRS S S TN D   K++K++   D              G A+ DEN+L+EVLKHVDA+TLA S CV+K
Sbjct:    1 MKRSASNSVTNGDASNKKMKKTTEEDSEI-----------GFANLDENLLYEVLKHVDARTLATSSCVSK 59          
BLAST of GR912219 vs. TAIR peptide
Match: AT4G24210.1 (| Symbols: SLY1 | F-box family protein | chr4:12563658-12564113 FORWARD LENGTH=151)

HSP 1 Score: 55.8398 bits (133), Expect = 1.012e-8
Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 3
Query:  192 VKRSNSNSEMKRSLSSATNEDRKMKRVKESEPNDENCEEIDGVCEKNRGLASFDENMLFEVLKHVDAKTLAMSGCVNK 425
            +KRS ++S++     + TN  +KMK  +E        EEI        G ++ DEN+++EVLKHVDAKTLAMS CV+K
Sbjct:    1 MKRSTTDSDLAGDAHNETN--KKMKSTEE--------EEI--------GFSNLDENLVYEVLKHVDAKTLAMSSCVSK 60          
The following BLAST results are available for this feature:
BLAST of GR912219 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
GID2_ARATH8.208e-843.59F-box protein GID2 OS=Arabidopsis thaliana GN=GID2... [more]
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BLAST of GR912219 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
C4T9C1_LOTJA7.971e-1463.89SLEEPY1a OS=Lotus japonicus GN=SLY1a PE=2 SV=1[more]
C6T4T3_SOYBN4.374e-1257.33Putative uncharacterized protein OS=Glycine max PE... [more]
B9GNS7_POPTR1.720e-845.83Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9MVW7_POPTR5.533e-743.24Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C9E6H5_BRANA7.226e-747.14SLY1 F-box protein OS=Brassica napus GN=SLY1 PE=2 ... [more]
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BLAST of GR912219 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G24210.11.012e-843.59| Symbols: SLY1 | F-box family protein | chr4:1256... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 19..31
score: NAcoord: 39..51
score
NoneNo IPR availableSEGsegsegcoord: 34..52
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR912219 ID=GR912219; Name=GR912219; organism=Cicer arietinum; type=EST; length=430bp
TAGCGTGGTCGCGGCCGAGGTCACTGACCCAATTCCGTTACCGTTATCCT
CACCCTTCTCTTAATTTATTATTAACCCTTATTTCTCTTTCTCTAACAGT
AAATCAGAACAACACCTCTTTGTTCTTTTCACACCCCCTTCTTCTCCTTT
CACCAAGATTCCAACTTTTTCGTTGCAAGGAAAAGAAAAGGGTGAAGCGT
TCCAATTCCAATTCAGAAATGAAGCGTTCACTTTCATCGGCAACGAACGA
AGACAGAAAAATGAAAAGAGTGAAGGAGTCAGAACCCAACGATGAAAACT
GCGAAGAAATTGATGGGGTTTGTGAGAAGAATCGCGGGCTAGCGAGTTTC
GACGAAAACATGCTGTTCGAAGTTCTGAAACACGTTGATGCAAAAACTTT
AGCTATGTCTGGTTGTGTGAACAAACAGTG
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