HO062660

EST Overview
NameHO062660
Unique NameHO062660
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length394
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062660 vs. TrEMBL
Match: B7FJZ2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.131e-20
Identity = 54/60 (90.00%), Postives = 55/60 (91.67%), Query Frame = 2
Query:    2 ARQMERNYPM--HSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            ARQMERNYP   HSA+EPSEDSI TLVSMGFDRNSARQALVQARNDVNVATNILLEAQ H
Sbjct:  233 ARQMERNYPAPTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNVATNILLEAQPH 292          
BLAST of HO062660 vs. TrEMBL
Match: C6T9M1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.615e-20
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 2
Query:    8 QMERNYP--MHSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            QMERNYP  M +A+EP+EDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH
Sbjct:  236 QMERNYPAPMQAAVEPTEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 293          
BLAST of HO062660 vs. TrEMBL
Match: Q2HSZ5_MEDTR (UBA-like OS=Medicago truncatula GN=MtrDRAFT_AC150889g7v2 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.787e-19
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = 2
Query:    2 ARQME------RNYPM--HSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            ARQME      RNYP   HSA+EPSEDSI TLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH
Sbjct:  233 ARQMEASFTSCRNYPAPTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 298          
BLAST of HO062660 vs. TrEMBL
Match: A5HIJ9_HIEPI (Putative ubiquitin associated/TS-N domain-containing protein OS=Hieracium piloselloides GN=UBA PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.919e-16
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 2
Query:    2 ARQMERNY--PMHSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            ARQ+E NY  PM S +EP EDSI  LVSMGFDRNSARQALV ARND+N ATNILLE+Q+H
Sbjct:  230 ARQVEGNYRAPMTSGIEPPEDSIEMLVSMGFDRNSARQALVHARNDINAATNILLESQAH 289          
BLAST of HO062660 vs. TrEMBL
Match: D7TQR0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025741001 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.390e-16
Identity = 45/60 (75.00%), Postives = 49/60 (81.67%), Query Frame = 2
Query:    5 RQMERNYPMH---SALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            RQ+E NYP     + +EP ED+I TLVSMGFDRNSARQALV ARNDVN ATNILLEAQSH
Sbjct:  235 RQVEGNYPSSMGAATIEPPEDAIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQSH 294          
BLAST of HO062660 vs. TrEMBL
Match: B9S843_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0692460 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.390e-16
Identity = 45/58 (77.59%), Postives = 48/58 (82.76%), Query Frame = 2
Query:    5 RQMERNYPMHSA-LEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            R +ER YP+     EP EDSI TLVSMGFDRNSARQALVQARND+N ATNILLEAQSH
Sbjct:  232 RHVERTYPIPMVPSEPPEDSIATLVSMGFDRNSARQALVQARNDINAATNILLEAQSH 289          
BLAST of HO062660 vs. TrEMBL
Match: Q9LET3_ARATH (At3g56740 OS=Arabidopsis thaliana GN=T8M16_70 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.869e-15
Identity = 44/59 (74.58%), Postives = 52/59 (88.14%), Query Frame = 2
Query:    5 RQMERNYP--MHSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            R+ ER+ P  + S++EPSE++ITTLVSMGFDRN+ARQALV ARNDVN ATNILLEAQSH
Sbjct:  235 RRAERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293          
BLAST of HO062660 vs. TrEMBL
Match: D7LVJ2_ARALY (Ubiquitin-associated /TS-N domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907122 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.441e-15
Identity = 44/59 (74.58%), Postives = 52/59 (88.14%), Query Frame = 2
Query:    5 RQMERNYP--MHSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            R+ ER+ P  + S++EPSE++ITTLVSMGFDRN+ARQALV ARNDVN ATNILLEAQSH
Sbjct:  235 RRAERSQPAPVPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293          
BLAST of HO062660 vs. TrEMBL
Match: B9H936_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819009 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.164e-15
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query:   26 PMHSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            PM  + EPSED+I TL SMGFDRNSARQALVQARNDVN ATNILLEAQSH
Sbjct:  241 PMAPSTEPSEDAIATLASMGFDRNSARQALVQARNDVNTATNILLEAQSH 290          
BLAST of HO062660 vs. TrEMBL
Match: Q8RXQ2_ARATH (Putative uncharacterized protein At2g41170 OS=Arabidopsis thaliana GN=At2g41170 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.604e-14
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 2
Query:    5 RQMERNY--PMHSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            RQ  R Y  PM S  EPSE++I TLVSMGFD+N+ARQALV ARNDVN ATNILLEA SH
Sbjct:  229 RQAVRAYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287          
BLAST of HO062660 vs. TAIR peptide
Match: AT3G56740.1 (| Symbols: | Ubiquitin-associated (UBA) protein | chr3:21015631-21017883 FORWARD LENGTH=293)

HSP 1 Score: 85.5001 bits (210), Expect = 9.666e-18
Identity = 44/59 (74.58%), Postives = 52/59 (88.14%), Query Frame = 2
Query:    5 RQMERNYP--MHSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            R+ ER+ P  + S++EPSE++ITTLVSMGFDRN+ARQALV ARNDVN ATNILLEAQSH
Sbjct:  235 RRAERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293          
BLAST of HO062660 vs. TAIR peptide
Match: AT2G41160.1 (| Symbols: | Ubiquitin-associated (UBA) protein | chr2:17156314-17158687 REVERSE LENGTH=287)

HSP 1 Score: 80.8777 bits (198), Expect = 2.381e-16
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 2
Query:    5 RQMERNY--PMHSALEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 175
            RQ  R Y  PM S  EPSE++I TLVSMGFD+N+ARQALV ARNDVN ATNILLEA SH
Sbjct:  229 RQAVRAYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287          
The following BLAST results are available for this feature:
BLAST of HO062660 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FJZ2_MEDTR1.131e-2090.00Putative uncharacterized protein OS=Medicago trunc... [more]
C6T9M1_SOYBN5.615e-2089.66Putative uncharacterized protein OS=Glycine max PE... [more]
Q2HSZ5_MEDTR2.787e-1983.33UBA-like OS=Medicago truncatula GN=MtrDRAFT_AC1508... [more]
A5HIJ9_HIEPI4.919e-1675.00Putative ubiquitin associated/TS-N domain-containi... [more]
D7TQR0_VITVI8.390e-1675.00Whole genome shotgun sequence of line PN40024, sca... [more]
B9S843_RICCO8.390e-1677.59Putative uncharacterized protein OS=Ricinus commun... [more]
Q9LET3_ARATH1.869e-1574.58At3g56740 OS=Arabidopsis thaliana GN=T8M16_70 PE=2... [more]
D7LVJ2_ARALY2.441e-1574.58Ubiquitin-associated /TS-N domain-containing prote... [more]
B9H936_POPTR4.164e-1584.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8RXQ2_ARATH4.604e-1472.88Putative uncharacterized protein At2g41170 OS=Arab... [more]
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BLAST of HO062660 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G56740.19.666e-1874.58| Symbols: | Ubiquitin-associated (UBA) protein |... [more]
AT2G41160.12.381e-1672.88| Symbols: | Ubiquitin-associated (UBA) protein |... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000449Ubiquitin-associated/translation elongation factor EF1B, N-terminalPFAMPF00627UBAcoord: 17..52
score: 2.8
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 4..54
score: 2
IPR015940Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryoteSMARTSM00165no descriptioncoord: 17..54
score: 3.6
IPR015940Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryotePROFILEPS50030UBAcoord: 15..55
score: 14
NoneNo IPR availableGENE3D1.10.8.10no descriptioncoord: 12..55
score: 3.5

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062660 ID=HO062660; Name=HO062660; organism=Cicer arietinum; type=EST; length=394bp
AGCTCGCCAAATGGAGAGAAACTATCCAATGCATTCTGCACTAGAACCAT
CCGAGGACTCAATCACGACCCTTGTTTCAATGGGATTTGACAGGAATTCG
GCAAGACAAGCCCTAGTGCAGGCGAGAAATGACGTCAATGTTGCAACAAA
CATCCTACTAGAGGCACAGTCCCACTAATTCCATAAAACCAAAGATGGAT
TTGTTCTGAATTGATAGATGGAAAGGCCACTGCTCTCGAAAAATCTTGGA
AATTTACTAATTATGATGTGAGGATGTCTGTGAACTCGTGGCATTCATCT
TATCATCCTCAGGTTCCTATTGAGGATCATTTTTTCCACCTTAACTTTAA
TCTTTAGATATATCCATTTTAGTACCTGCCCGGGCGGCCGCTCG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR000449Ubiquitin-associated/translation elongation factor EF1B, N-terminal
IPR009060UBA-like_sf
IPR015940UBA