HO067887

EST Overview
NameHO067887
Unique NameHO067887
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length483
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of HO067887 vs. TrEMBL
Match: B7FJ95_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.122e-7
Identity = 31/60 (51.67%), Postives = 35/60 (58.33%), Query Frame = 2 
Query:    2 GSPRRGG-IXXXXXXXXXXXXXXXXXXXXXXVYDRYSGPDRRRSPDYGRHRSPEYGRYRS 178
            GSPRRGG +                      VYDRY+GPDRRRSPDYGR+ SP+YGR RS
Sbjct:  173 GSPRRGGGLARSPSPGYRRRPSPDYGRPRSPVYDRYTGPDRRRSPDYGRNGSPDYGRNRS 232
[Close]
BLAST of HO067887 vs. TAIR peptide
Match: AT3G61860.1 (| Symbols: ATRSP31, RSP31, At-RS31, RS31 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:22900311-22902159 REVERSE LENGTH=264)

HSP 1 Score: 50.8322 bits (120), Expect = 4.232e-7
Identity = 28/46 (60.87%), Postives = 29/46 (63.04%), Query Frame = 2 
Query:   95 YDRYSGP---DRRRSPDYG-------RHRSPEYGRYRSGSPVRRSR 202
            YDRY GP   +RRRSPDYG       R RSP Y RYRS SPV R R
Sbjct:  218 YDRYKGPAAYERRRSPDYGRRSSDYGRQRSPGYDRYRSRSPVPRGR 263
The following BLAST results are available for this feature:
BLAST of HO067887 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B7FJ95_MEDTR1.122e-751.67Putative uncharacterized protein (Fragment) OS=Med... [more]
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BLAST of HO067887 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G61860.14.232e-760.87| Symbols: ATRSP31, RSP31, At-RS31, RS31 | RNA-bin... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..30
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO067887 ID=HO067887; Name=HO067887; organism=Cicer arietinum; type=EST; length=483bp
TGGCAGTCCCAGAAGAGGAGGTATTGATAGATCACCCAGTCCAGGTTATC
GCAGACGACCAAGTCCTGACTATGGACGACCACGCAGCCCTGTGTATGAT
AGGTACAGTGGACCGGACAGGCGGAGGAGTCCTGATTATGGCAGGCACCG
GAGTCCTGAATATGGCAGATATCGCAGTGGTTCACCAGTGCGAAGGTCAA
GAACTTAGGCGATCTCTTCTGGTCTGGGGTAATGAGCAGAGCTTGAGTGG
CACTTTCTTACTGTCTTAATATTAGAATAGTAAGTGGAACCTTATGTACT
AAAGAGTACCTTTCAGCCTCATGTGGATTGGTCTGGTTTGGTTTGTCTTT
TCTATGTAGTAGTCATTGTGCTTTTATAGGAACTGAATTTAAAACTCTTT
TGATTTGGAATTATTGATTCATATTTGAAAGGACATCATGTTATGCTAGA
TGGAAACTTAATGTAATCTTACTACTGGTATTG
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