FE672846
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE672846 vs. SwissProt
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.658e-13 Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIE L +GYIEF+RN+ DP R+Y Sbjct: 169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIY 218
BLAST of FE672846 vs. SwissProt
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.075e-12 Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS ++L WIE L IGYIEF+RNA D RLY Sbjct: 165 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 214
BLAST of FE672846 vs. SwissProt
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.075e-12 Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS ++L WIE L IGYIEF+RNA D RLY Sbjct: 168 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 217
BLAST of FE672846 vs. TrEMBL
Match: C6TDC5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.332e-13 Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIEAL IGYIEF+RNA DP RLY Sbjct: 167 AGKVELVEGSSYLGQPLPFSITTLIWIEALVIGYIEFQRNAELDPEKRLY 216
BLAST of FE672846 vs. TrEMBL
Match: Q9XQB2_PHAAU (Chlorophyll a/b binding protein CP29 OS=Phaseolus aureus GN=CipCp29 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.785e-13 Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIE L IGYIEF+RNA DP RLY Sbjct: 167 AGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLY 216
BLAST of FE672846 vs. TrEMBL
Match: B9HCM1_POPTR (Light-harvesting complex II protein Lhcb4 OS=Populus trichocarpa GN=Lhcb4 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.785e-13 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIEA+ IGYIEF+RNA DP RLY Sbjct: 164 AGKVELVEGSSYLGQPLPFSITALIWIEAVIIGYIEFQRNAELDPEKRLY 213
BLAST of FE672846 vs. TrEMBL
Match: A9PIZ2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.785e-13 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIEA+ IGYIEF+RNA DP RLY Sbjct: 164 AGKVELVEGSSYLGQPLPFSITALIWIEAVIIGYIEFQRNAELDPEKRLY 213
BLAST of FE672846 vs. TrEMBL
Match: A5C288_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010727 PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.861e-13 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVEL+ GS+ LGQPLPFS T+L WIE L IGYIEF+RNA DP RLY Sbjct: 166 AGKVELIEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDPEKRLY 215
BLAST of FE672846 vs. TrEMBL
Match: B9SLN2_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0593190 PE=4 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.157e-12 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIE L IGYIEF+RNA DP R+Y Sbjct: 175 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRIY 224
BLAST of FE672846 vs. TrEMBL
Match: B9SQ36_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0644360 PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.511e-12 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIE L IGYIEF+RN+ DP RLY Sbjct: 164 AGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLY 213
BLAST of FE672846 vs. TrEMBL
Match: A9PK34_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.511e-12 Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVEL+ GS+ LGQPLPFS T+L WIE + IGYIEF+RNA DP RLY Sbjct: 168 AGKVELIEGSSYLGQPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLY 217
BLAST of FE672846 vs. TrEMBL
Match: C1K5D1_GOSHI (Chloroplast chlorophyll A-B binding protein OS=Gossypium hirsutum GN=CBP3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.974e-12 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIE L IG+IEF+RNA DP RLY Sbjct: 164 AGKVELVEGSSYLGQPLPFSMTTLIWIEVLVIGFIEFQRNAELDPEKRLY 213
BLAST of FE672846 vs. TrEMBL
Match: B9HHN0_POPTR (Light-harvesting complex II protein Lhcb8 OS=Populus trichocarpa GN=Lhcb8 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.974e-12 Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVEL+ GS+ LGQPLPFS T+L WIE + +GYIEF+RNA DP RLY Sbjct: 168 AGKVELIEGSSYLGQPLPFSLTTLIWIEVIVVGYIEFQRNAELDPEKRLY 217
BLAST of FE672846 vs. TAIR peptide
Match: AT2G40100.1 (| Symbols: LHCB4.3 | light harvesting complex photosystem II | chr2:16745884-16747190 FORWARD LENGTH=276) HSP 1 Score: 74.7146 bits (182), Expect = 1.271e-14 Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS T+L WIE L +GYIEF+RN+ DP R+Y Sbjct: 169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIY 218
BLAST of FE672846 vs. TAIR peptide
Match: AT5G01530.1 (| Symbols: LHCB4.1 | light harvesting complex photosystem II | chr5:209084-210243 FORWARD LENGTH=290) HSP 1 Score: 72.0182 bits (175), Expect = 8.236e-14 Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS ++L WIE L IGYIEF+RNA D RLY Sbjct: 168 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 217
BLAST of FE672846 vs. TAIR peptide
Match: AT3G08940.2 (| Symbols: LHCB4.2 | light harvesting complex photosystem II | chr3:2717717-2718665 FORWARD LENGTH=287) HSP 1 Score: 72.0182 bits (175), Expect = 8.236e-14 Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = -3 Query: 3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152 AGKVELV GS+ LGQPLPFS ++L WIE L IGYIEF+RNA D RLY Sbjct: 165 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 214 The following BLAST results are available for this feature:
BLAST of FE672846 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 3
BLAST of FE672846 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of FE672846 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE672846 ID=FE672846; Name=FE672846; organism=Cicer arietinum; type=EST; length=154bpback to top |