FE672846

EST Overview
NameFE672846
Unique NameFE672846
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length154
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of FE672846 vs. SwissProt
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.658e-13
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIE L +GYIEF+RN+  DP  R+Y
Sbjct:  169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIY 218          
BLAST of FE672846 vs. SwissProt
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.075e-12
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS ++L WIE L IGYIEF+RNA  D   RLY
Sbjct:  165 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 214          
BLAST of FE672846 vs. SwissProt
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.075e-12
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS ++L WIE L IGYIEF+RNA  D   RLY
Sbjct:  168 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 217          
BLAST of FE672846 vs. TrEMBL
Match: C6TDC5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.332e-13
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIEAL IGYIEF+RNA  DP  RLY
Sbjct:  167 AGKVELVEGSSYLGQPLPFSITTLIWIEALVIGYIEFQRNAELDPEKRLY 216          
BLAST of FE672846 vs. TrEMBL
Match: Q9XQB2_PHAAU (Chlorophyll a/b binding protein CP29 OS=Phaseolus aureus GN=CipCp29 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.785e-13
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIE L IGYIEF+RNA  DP  RLY
Sbjct:  167 AGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLY 216          
BLAST of FE672846 vs. TrEMBL
Match: B9HCM1_POPTR (Light-harvesting complex II protein Lhcb4 OS=Populus trichocarpa GN=Lhcb4 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.785e-13
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIEA+ IGYIEF+RNA  DP  RLY
Sbjct:  164 AGKVELVEGSSYLGQPLPFSITALIWIEAVIIGYIEFQRNAELDPEKRLY 213          
BLAST of FE672846 vs. TrEMBL
Match: A9PIZ2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.785e-13
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIEA+ IGYIEF+RNA  DP  RLY
Sbjct:  164 AGKVELVEGSSYLGQPLPFSITALIWIEAVIIGYIEFQRNAELDPEKRLY 213          
BLAST of FE672846 vs. TrEMBL
Match: A5C288_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010727 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.861e-13
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVEL+ GS+ LGQPLPFS T+L WIE L IGYIEF+RNA  DP  RLY
Sbjct:  166 AGKVELIEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDPEKRLY 215          
BLAST of FE672846 vs. TrEMBL
Match: B9SLN2_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0593190 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.157e-12
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIE L IGYIEF+RNA  DP  R+Y
Sbjct:  175 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRIY 224          
BLAST of FE672846 vs. TrEMBL
Match: B9SQ36_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0644360 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.511e-12
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIE L IGYIEF+RN+  DP  RLY
Sbjct:  164 AGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLY 213          
BLAST of FE672846 vs. TrEMBL
Match: A9PK34_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.511e-12
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVEL+ GS+ LGQPLPFS T+L WIE + IGYIEF+RNA  DP  RLY
Sbjct:  168 AGKVELIEGSSYLGQPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLY 217          
BLAST of FE672846 vs. TrEMBL
Match: C1K5D1_GOSHI (Chloroplast chlorophyll A-B binding protein OS=Gossypium hirsutum GN=CBP3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.974e-12
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIE L IG+IEF+RNA  DP  RLY
Sbjct:  164 AGKVELVEGSSYLGQPLPFSMTTLIWIEVLVIGFIEFQRNAELDPEKRLY 213          
BLAST of FE672846 vs. TrEMBL
Match: B9HHN0_POPTR (Light-harvesting complex II protein Lhcb8 OS=Populus trichocarpa GN=Lhcb8 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.974e-12
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVEL+ GS+ LGQPLPFS T+L WIE + +GYIEF+RNA  DP  RLY
Sbjct:  168 AGKVELIEGSSYLGQPLPFSLTTLIWIEVIVVGYIEFQRNAELDPEKRLY 217          
BLAST of FE672846 vs. TAIR peptide
Match: AT2G40100.1 (| Symbols: LHCB4.3 | light harvesting complex photosystem II | chr2:16745884-16747190 FORWARD LENGTH=276)

HSP 1 Score: 74.7146 bits (182), Expect = 1.271e-14
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS T+L WIE L +GYIEF+RN+  DP  R+Y
Sbjct:  169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIY 218          
BLAST of FE672846 vs. TAIR peptide
Match: AT5G01530.1 (| Symbols: LHCB4.1 | light harvesting complex photosystem II | chr5:209084-210243 FORWARD LENGTH=290)

HSP 1 Score: 72.0182 bits (175), Expect = 8.236e-14
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS ++L WIE L IGYIEF+RNA  D   RLY
Sbjct:  168 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 217          
BLAST of FE672846 vs. TAIR peptide
Match: AT3G08940.2 (| Symbols: LHCB4.2 | light harvesting complex photosystem II | chr3:2717717-2718665 FORWARD LENGTH=287)

HSP 1 Score: 72.0182 bits (175), Expect = 8.236e-14
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = -3
Query:    3 AGKVELVAGSTCLGQPLPFSFTSLNWIEALTIGYIEFRRNAAFDPAMRLY 152
            AGKVELV GS+ LGQPLPFS ++L WIE L IGYIEF+RNA  D   RLY
Sbjct:  165 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 214          
The following BLAST results are available for this feature:
BLAST of FE672846 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
CB4C_ARATH1.658e-1368.00Chlorophyll a-b binding protein CP29.3, chloroplas... [more]
CB4B_ARATH1.075e-1270.00Chlorophyll a-b binding protein CP29.2, chloroplas... [more]
CB4A_ARATH1.075e-1270.00Chlorophyll a-b binding protein CP29.1, chloroplas... [more]
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BLAST of FE672846 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TDC5_SOYBN2.332e-1376.00Putative uncharacterized protein OS=Glycine max PE... [more]
Q9XQB2_PHAAU6.785e-1374.00Chlorophyll a/b binding protein CP29 OS=Phaseolus ... [more]
B9HCM1_POPTR6.785e-1374.00Light-harvesting complex II protein Lhcb4 OS=Popul... [more]
A9PIZ2_9ROSI6.785e-1374.00Putative uncharacterized protein OS=Populus tricho... [more]
A5C288_VITVI8.861e-1372.00Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SLN2_RICCO1.157e-1272.00Chlorophyll A/B binding protein, putative OS=Ricin... [more]
B9SQ36_RICCO1.511e-1272.00Chlorophyll A/B binding protein, putative OS=Ricin... [more]
A9PK34_9ROSI1.511e-1270.00Putative uncharacterized protein OS=Populus tricho... [more]
C1K5D1_GOSHI1.974e-1272.00Chloroplast chlorophyll A-B binding protein OS=Gos... [more]
B9HHN0_POPTR1.974e-1268.00Light-harvesting complex II protein Lhcb8 OS=Popul... [more]
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BLAST of FE672846 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G40100.11.271e-1468.00| Symbols: LHCB4.3 | light harvesting complex phot... [more]
AT5G01530.18.236e-1470.00| Symbols: LHCB4.1 | light harvesting complex phot... [more]
AT3G08940.28.236e-1470.00| Symbols: LHCB4.2 | light harvesting complex phot... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE672846 ID=FE672846; Name=FE672846; organism=Cicer arietinum; type=EST; length=154bp
GGGTAAAGTCTCATTGCGGGGTCAAACGCTGCATTTCTTCGGAATTCAAT
GTATCCTATTGTTAAAGCTTCTATCCAGTTTAAACTTGTGAATGAGAATG
GAAGTGGTTGTCCTAAACATGTTGATCCTGCCACAAGCTCCACCTTTCCG
GCGT
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