GO660545

EST Overview


Name	GO660545
Unique Name	GO660545
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	220

Libraries


Library Name	Type
LIBEST_024573 Chickpea cv. WR315 infected by Fusarium oxysporum f. sp. ciceri (Race 1)	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GO660545 vs. SwissProt
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 4.538e-8
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 3

Query:    3 NSPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARS 161
            NSP + T+V +EGAIPPLVALSQ+GT RAK+KA+ L+   R  R       RS
Sbjct:  708 NSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDARMKKGRS 760

[Close]

BLAST of GO660545 vs. TrEMBL
Match: Q9SGH8_ARATH (T13O15.4 protein OS=Arabidopsis thaliana GN=At3g01400 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.511e-20
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 3

Query:    6 SPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ 170
            S VYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ
Sbjct:  300 SVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ 354

[Close]

BLAST of GO660545 vs. TrEMBL
Match: Q8LB86_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.511e-20
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 3

Query:    6 SPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ 170
            S VYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ
Sbjct:  300 SVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ 354

[Close]

BLAST of GO660545 vs. TrEMBL
Match: Q944I3_ARATH (AT3g01400/T13O15_4 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.182e-19
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 3

Query:    6 SPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ 170
            S VYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQ RSISNGGARSSSQ
Sbjct:  300 SVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQLRSISNGGARSSSQ 354

[Close]

BLAST of GO660545 vs. TrEMBL
Match: B9IBR7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_730777 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.819e-12
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 3

Query:   12 VYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSS 164
            V+R MVAREGAIP LVAL+Q+GT+RAKQKAE LI+LLRQPRS +   AR+S
Sbjct:  218 VFRAMVAREGAIPALVALTQSGTNRAKQKAETLIDLLRQPRSSNAAAARTS 268

[Close]

BLAST of GO660545 vs. TrEMBL
Match: B9R706_RICCO (E3 ubiquitin ligase PUB14, putative OS=Ricinus communis GN=RCOM_1587530 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.312e-11
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 3

Query:   18 RTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARS 161
            R MV REGAIPPL+ALSQ+GT+RAKQKAE LI+LLRQPRS  N  AR+
Sbjct:  301 RAMVVREGAIPPLIALSQSGTNRAKQKAETLIDLLRQPRS-GNAAART 347

[Close]

BLAST of GO660545 vs. TrEMBL
Match: D3YBB2_TRIRP (E3 ubiquitin ligase OS=Trifolium repens PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.086e-10
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:   15 YRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSS 164
            YR MV REGAIPPLV LSQ+GT RAK+K E LIELLRQPRS SN  AR+S
Sbjct:  290 YRIMVCREGAIPPLVCLSQSGTDRAKRKVETLIELLRQPRS-SNPIARAS 338

[Close]

BLAST of GO660545 vs. TrEMBL
Match: Q8LGC7_ARATH (Armadillo/beta-catenin repeat family protein OS=Arabidopsis thaliana GN=At5g58680 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.388e-10
Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 3

Query:    6 SPVYRTMVAREGAIPPLVALSQAGTSR-AKQKAEALIELLRQPR 134
            S VYRTMVAREGA+PPLVALSQ   SR AK KAEALIELLRQPR
Sbjct:  298 SVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQPR 341

[Close]

BLAST of GO660545 vs. TrEMBL
Match: Q8GWD6_ARATH (Putative uncharacterized protein At5g58680/mzn1_130 OS=Arabidopsis thaliana GN=At5g58680/mzn1_130 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.388e-10
Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 3

Query:    6 SPVYRTMVAREGAIPPLVALSQAGTSR-AKQKAEALIELLRQPR 134
            S VYRTMVAREGA+PPLVALSQ   SR AK KAEALIELLRQPR
Sbjct:  298 SVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQPR 341

[Close]

BLAST of GO660545 vs. TrEMBL
Match: Q6ZIQ0_ORYSJ (Arm repeat-containing protein-like protein OS=Oryza sativa subsp. japonica GN=OJ1047_C01.11 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.190e-10
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 3

Query:    3 NSPVYRTMVAREGAIPPLVALSQAGTSR--AKQKAEALIELLRQPRSIS 143
            +S  YRTMVAREGAIPPLVALSQ+ ++R   K KAEALIE+LRQPRS S
Sbjct:  302 DSAAYRTMVAREGAIPPLVALSQSSSARPKLKTKAEALIEMLRQPRSAS 350

[Close]

BLAST of GO660545 vs. TrEMBL
Match: A2YN64_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26675 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.190e-10
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 3

Query:    3 NSPVYRTMVAREGAIPPLVALSQAGTSR--AKQKAEALIELLRQPRSIS 143
            +S  YRTMVAREGAIPPLVALSQ+ ++R   K KAEALIE+LRQPRS S
Sbjct:   63 DSAAYRTMVAREGAIPPLVALSQSSSARPKLKTKAEALIEMLRQPRSAS 111

[Close]

BLAST of GO660545 vs. TAIR peptide
Match: AT3G01400.1 (| Symbols: | ARM repeat superfamily protein | chr3:151920-152987 FORWARD LENGTH=355)

HSP 1 Score: 102.449 bits (254), Expect = 5.810e-23
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 3

Query:    6 SPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ 170
            S VYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ
Sbjct:  300 SVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARSSSQ 354

[Close]

BLAST of GO660545 vs. TAIR peptide
Match: AT5G58680.1 (| Symbols: | ARM repeat superfamily protein | chr5:23708247-23709320 REVERSE LENGTH=357)

HSP 1 Score: 67.3958 bits (163), Expect = 2.071e-12
Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 3

Query:    6 SPVYRTMVAREGAIPPLVALSQAGTSR-AKQKAEALIELLRQPR 134
            S VYRTMVAREGA+PPLVALSQ   SR AK KAEALIELLRQPR
Sbjct:  298 SVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQPR 341

[Close]

BLAST of GO660545 vs. TAIR peptide
Match: AT3G54790.2 (| Symbols: | ARM repeat superfamily protein | chr3:20281830-20284255 REVERSE LENGTH=724)

HSP 1 Score: 56.6102 bits (135), Expect = 3.656e-9
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 3

Query:    3 NSPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARS 161
            NSP + T+V +EGAIPPLVALSQ+GT RAK+KA+ L+   R  R       RS
Sbjct:  672 NSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDARMKKGRS 724

[Close]

BLAST of GO660545 vs. TAIR peptide
Match: AT3G54790.1 (| Symbols: | ARM repeat superfamily protein | chr3:20281830-20284363 REVERSE LENGTH=760)

HSP 1 Score: 56.6102 bits (135), Expect = 3.656e-9
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 3

Query:    3 NSPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISNGGARS 161
            NSP + T+V +EGAIPPLVALSQ+GT RAK+KA+ L+   R  R       RS
Sbjct:  708 NSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDARMKKGRS 760

[Close]

BLAST of GO660545 vs. TAIR peptide
Match: AT2G23140.2 (| Symbols: | RING/U-box superfamily protein with ARM repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826)

HSP 1 Score: 52.373 bits (124), Expect = 6.895e-8
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3

Query:    3 NSPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPR 134
            NS  +  MV +EGA+PPLVALSQ+GT RA++KA+AL+   R  R
Sbjct:  776 NSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQR 819

[Close]

BLAST of GO660545 vs. TAIR peptide
Match: AT2G23140.1 (| Symbols: | RING/U-box superfamily protein with ARM repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829)

HSP 1 Score: 52.373 bits (124), Expect = 6.895e-8
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3

Query:    3 NSPVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPR 134
            NS  +  MV +EGA+PPLVALSQ+GT RA++KA+AL+   R  R
Sbjct:  779 NSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQR 822

The following BLAST results are available for this feature:

BLAST of GO660545 vs. SwissProt
BLAST of GO660545 vs. TrEMBL
BLAST of GO660545 vs. TAIR peptide

BLAST of GO660545 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
PUB3_ARATH	4.538e-8	54.72	U-box domain-containing protein 3 OS=Arabidopsis t...	[more]

BLAST of GO660545 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9SGH8_ARATH	1.511e-20	98.18	T13O15.4 protein OS=Arabidopsis thaliana GN=At3g01...	[more]
Q8LB86_ARATH	1.511e-20	98.18	Putative uncharacterized protein OS=Arabidopsis th...	[more]
Q944I3_ARATH	2.182e-19	96.36	AT3g01400/T13O15_4 OS=Arabidopsis thaliana PE=2 SV...	[more]
B9IBR7_POPTR	9.819e-12	72.55	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9R706_RICCO	8.312e-11	75.00	E3 ubiquitin ligase PUB14, putative OS=Ricinus com...	[more]
D3YBB2_TRIRP	1.086e-10	76.00	E3 ubiquitin ligase OS=Trifolium repens PE=4 SV=1	[more]
Q8LGC7_ARATH	5.388e-10	84.09	Armadillo/beta-catenin repeat family protein OS=Ar...	[more]
Q8GWD6_ARATH	5.388e-10	84.09	Putative uncharacterized protein At5g58680/mzn1_13...	[more]
Q6ZIQ0_ORYSJ	9.190e-10	73.47	Arm repeat-containing protein-like protein OS=Oryz...	[more]
A2YN64_ORYSI	9.190e-10	73.47	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GO660545 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT3G01400.1	5.810e-23	98.18	\| Symbols: \| ARM repeat superfamily protein \| chr...	[more]
AT5G58680.1	2.071e-12	84.09	\| Symbols: \| ARM repeat superfamily protein \| chr...	[more]
AT3G54790.2	3.656e-9	54.72	\| Symbols: \| ARM repeat superfamily protein \| chr...	[more]
AT3G54790.1	3.656e-9	54.72	\| Symbols: \| ARM repeat superfamily protein \| chr...	[more]
AT2G23140.2	6.895e-8	56.82	\| Symbols: \| RING/U-box superfamily protein with ...	[more]
AT2G23140.1	6.895e-8	56.82	\| Symbols: \| RING/U-box superfamily protein with ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 10..21 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GO660545 ID=GO660545; Name=GO660545; organism=Cicer arietinum; type=EST; length=220bp
CCAATTCACCTGTGTATAGAACAATGGTGGCTAGAGAAGGAGCGATACCT
CCGCTAGTGGCTCTGTCGCAGGCAGGAACAAGTCGAGCTAAGCAAAAGGC
TGAGGCGTTGATTGAGCTTCTAAGGCAACCAAGATCCATTAGTAATGGTG
GTGCTAGATCATCGTCCCAACACCACCACACGTCGGAATGCCACTAACCT
CTGATCTTCACATTGTGTAT

Search form