DY475294

EST Overview


Name	DY475294
Unique Name	DY475294
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	226

Libraries


Library Name	Type
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28

Homology

[Close]

BLAST of DY475294 vs. SwissProt
Match: NU4M_ARATH (NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana GN=ND4 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.419e-27
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFLHKFSDLNGREVFIFIPFLVG+V  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVGLVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 6.419e-27
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. SwissProt
Match: NU4M_WHEAT (NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum GN=ND4 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.398e-26
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFL+KFSDLNGREVFIF+PFLVGVV  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLYKFSDLNGREVFIFLPFLVGVVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 2.398e-26
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. SwissProt
Match: NU4M_BRACM (NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris GN=ND4 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.579e-24
Identity = 39/50 (78.00%), Postives = 41/50 (82.00%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQSVP 157
            SLWLYNRVVSGNLK DFLHKFSD NGREV IFIPFLVG+V  G  P+  P
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDSNGREVSIFIPFLVGLVRMGVHPKVFP 478

HSP 2 Score: 50.8322 bits (120), Expect = 3.579e-24
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGV+PKVF DCMHT VSNLVQHGKF+
Sbjct:  470 MGVHPKVFPDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. SwissProt
Match: NU4M_MARPO (NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha GN=ND4 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.358e-21
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVV GN K +F+ KFSDLN REV IF+PF+VGV+  G  P+
Sbjct:  429 SLWLYNRVVFGNFKPNFILKFSDLNRREVLIFLPFIVGVIWMGVYPE 475

HSP 2 Score: 52.373 bits (124), Expect = 4.358e-21
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYP+VFL+CMHT VSNLVQHGKF+
Sbjct:  470 MGVYPEVFLECMHTSVSNLVQHGKFD 495

[Close]

BLAST of DY475294 vs. SwissProt
Match: NU4M_PROWI (NADH-ubiquinone oxidoreductase chain 4 OS=Prototheca wickerhamii GN=ND4 PE=3 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 2.368e-7
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            +LWL NR++ G  K DF++ +SD+N RE F+F P + G++  G  P+
Sbjct:  460 ALWLCNRLIYGVSKPDFINTWSDVNRREFFMFAPLIAGILWIGVYPE 506

HSP 2 Score: 25.0238 bits (53), Expect = 2.368e-7
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3

Query:  132 MGVYPKVFLDCMH 170
            +GVYP+ FLD MH
Sbjct:  501 IGVYPEPFLDAMH 513

[Close]

BLAST of DY475294 vs. TrEMBL
Match: Q9MF62_BETVU (NADH-ubiquinone oxidoreductase chain 4 OS=Beta vulgaris subsp. vulgaris GN=nad4 PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 5.864e-26
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFLHKFSDLNGREVFIFIPFLVGVV  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVGVVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 5.864e-26
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: Q8M8A9_BETVU (NADH-ubiquinone oxidoreductase chain 4 OS=Beta vulgaris GN=nad4 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.864e-26
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFLHKFSDLNGREVFIFIPFLVGVV  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVGVVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 5.864e-26
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: D7RMY2_SILLA (NADH dehydrogenase subunit 4 OS=Silene latifolia GN=nad4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.634e-26
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFLHKFSDLNGRE+FIFIPFLVGVV  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDLNGREIFIFIPFLVGVVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 7.634e-26
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: Q6YSN0_BRANA (NADH-ubiquinone oxidoreductase chain 4 OS=Brassica napus GN=nad4 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.293e-25
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFLHKFSDLNGREVFIFIPFLVG+V  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVGLVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 1.293e-25
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: B5TM93_ARATH (NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.293e-25
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFLHKFSDLNGREVFIFIPFLVG+V  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVGLVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 1.293e-25
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: B1A0V4_9POAL (NADH-ubiquinone oxidoreductase chain 4 OS=Phyllostachys edulis PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 4.832e-25
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFL+KFSDLNGREVFIF+PFLVGVV  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLYKFSDLNGREVFIFLPFLVGVVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 4.832e-25
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: B1A0V2_BAMOL (NADH-ubiquinone oxidoreductase chain 4 OS=Bambusa oldhamii PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.832e-25
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFL+KFSDLNGREVFIF+PFLVGVV  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLYKFSDLNGREVFIFLPFLVGVVWMGVYPK 475

HSP 2 Score: 55.4546 bits (132), Expect = 4.832e-25
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLDCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: Q37544_LACSA (NADH-ubiquinone oxidoreductase chain 4 OS=Lactuca sativa GN=nad4 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.289e-25
Identity = 41/50 (82.00%), Postives = 42/50 (84.00%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQSVP 157
            SLWLYNRVVSGNLK DFLHKFSDLNG EVFIFIPFLVGVV  G  P+  P
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDLNGTEVFIFIPFLVGVVWMGVYPKVFP 478

HSP 2 Score: 52.7582 bits (125), Expect = 6.289e-25
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVF DCMHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFPDCMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: D5I3B5_CITLA (NADH-ubiquinone oxidoreductase chain 4 OS=Citrullus lanatus GN=nad4 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.065e-24
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQ 148
            SLWLYNRVVSGNLK DFLHKFSDLNGREVFIFIPFLVGVV  G  P+
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVGVVWMGVYPK 475

HSP 2 Score: 51.2174 bits (121), Expect = 1.065e-24
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGVYPKVFLD MHT VSNLVQHGKF+
Sbjct:  470 MGVYPKVFLDYMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TrEMBL
Match: D5I3D6_CUCPE (NADH-ubiquinone oxidoreductase chain 4 OS=Cucurbita pepo GN=nad4 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.141e-23
Identity = 42/50 (84.00%), Postives = 43/50 (86.00%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQSVP 157
            SLWLYNRVVSGNLK DFLHKFSDLNGREVFIFIPFLVGVV  G  P+  P
Sbjct:  429 SLWLYNRVVSGNLKTDFLHKFSDLNGREVFIFIPFLVGVVRMGVHPKVFP 478

HSP 2 Score: 46.595 bits (109), Expect = 1.141e-23
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGV+PKVF D MHT VSNLVQHGKF+
Sbjct:  470 MGVHPKVFPDYMHTSVSNLVQHGKFH 495

[Close]

BLAST of DY475294 vs. TAIR peptide
Match: ATMG00580.1 (| Symbols: NAD4 | NADH dehydrogenase subunit 4 | chrM:161693-169674 FORWARD LENGTH=495)

HSP 1 Score: 80.1073 bits (196), Expect = 2.781e-25
Identity = 39/50 (78.00%), Postives = 41/50 (82.00%), Query Frame = 2

Query:    8 SLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVXDGCLPQSVP 157
            SLWLYNRVVSGNLK DFLHKFSD NGREV IFIPFLVG+V  G  P+  P
Sbjct:  429 SLWLYNRVVSGNLKPDFLHKFSDSNGREVSIFIPFLVGLVRMGVHPKVFP 478

HSP 2 Score: 50.8322 bits (120), Expect = 2.781e-25
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 3

Query:  132 MGVYPKVFLDCMHTYVSNLVQHGKFN 209
            MGV+PKVF DCMHT VSNLVQHGKF+
Sbjct:  470 MGVHPKVFPDCMHTSVSNLVQHGKFH 495

The following BLAST results are available for this feature:

BLAST of DY475294 vs. SwissProt
BLAST of DY475294 vs. TrEMBL
BLAST of DY475294 vs. TAIR peptide

BLAST of DY475294 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
NU4M_ARATH	6.419e-27	85.11	NADH-ubiquinone oxidoreductase chain 4 OS=Arabidop...	[more]
NU4M_WHEAT	2.398e-26	82.98	NADH-ubiquinone oxidoreductase chain 4 OS=Triticum...	[more]
NU4M_BRACM	3.579e-24	78.00	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica...	[more]
NU4M_MARPO	4.358e-21	65.96	NADH-ubiquinone oxidoreductase chain 4 OS=Marchant...	[more]
NU4M_PROWI	2.368e-7	42.55	NADH-ubiquinone oxidoreductase chain 4 OS=Protothe...	[more]

BLAST of DY475294 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9MF62_BETVU	5.864e-26	87.23	NADH-ubiquinone oxidoreductase chain 4 OS=Beta vul...	[more]
Q8M8A9_BETVU	5.864e-26	87.23	NADH-ubiquinone oxidoreductase chain 4 OS=Beta vul...	[more]
D7RMY2_SILLA	7.634e-26	85.11	NADH dehydrogenase subunit 4 OS=Silene latifolia G...	[more]
Q6YSN0_BRANA	1.293e-25	85.11	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica...	[more]
B5TM93_ARATH	1.293e-25	85.11	NADH-ubiquinone oxidoreductase chain 4 OS=Arabidop...	[more]
B1A0V4_9POAL	4.832e-25	82.98	NADH-ubiquinone oxidoreductase chain 4 OS=Phyllost...	[more]
B1A0V2_BAMOL	4.832e-25	82.98	NADH-ubiquinone oxidoreductase chain 4 OS=Bambusa ...	[more]
Q37544_LACSA	6.289e-25	82.00	NADH-ubiquinone oxidoreductase chain 4 OS=Lactuca ...	[more]
D5I3B5_CITLA	1.065e-24	87.23	NADH-ubiquinone oxidoreductase chain 4 OS=Citrullu...	[more]
D5I3D6_CUCPE	1.141e-23	84.00	NADH-ubiquinone oxidoreductase chain 4 OS=Cucurbit...	[more]

BLAST of DY475294 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ATMG00580.1	2.781e-25	78.00	\| Symbols: NAD4 \| NADH dehydrogenase subunit 4 \| c...	[more]

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY475294 ID=DY475294; Name=DY475294; organism=Cicer arietinum; type=EST; length=226bp
GCGGGATTCCCTTTGGCTATATAATCGTGTGGTTTCTGGAAATTTAAAAG
CCGATTTCCTCCATAAATTCTCCGATCTAAATGGCAGAGAAGTTTTCATA
TTTATACCTTTTCTTGTTGGAGTTGTTTGNGATGGGTGTTTACCCCAAAG
TGTTCCTGGACTGCATGCATACATACGTAAGTAACTTAGTGCAACATGGG
AAATTTAATTGAGAGGAATCAGCCAC

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