GR405185

EST Overview
NameGR405185
Unique NameGR405185
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length655
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR405185 vs. SwissProt
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.016e-7
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 3
Query:   48 PTPTMAD----KGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANI 185
            PT   AD    K   +PKFG+WD N+P+SA+G+T IFNK R ER +GAN+
Sbjct:  133 PTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 182          
BLAST of GR405185 vs. TrEMBL
Match: B9T1T7_RICCO (NOI, putative OS=Ricinus communis GN=RCOM_0691110 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.574e-24
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKAS 284
            MADKG PLPKFGEWDVNDPASAEGFTVIFNKARNE+KTG    SP KD N+ +K      GKPQSKKWFCCI+++
Sbjct:    1 MADKGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAKD-NSGYKPGTTTLGKPQSKKWFCCIQSA 74          
BLAST of GR405185 vs. TrEMBL
Match: B9IAU8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_732478 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.605e-23
Identity = 52/75 (69.33%), Postives = 58/75 (77.33%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKAS 284
            MA+K  PLPKFGEWDVNDPASAEGFTVIFNKARNE+KTG    SP KD +T         GKPQ+KKWFCCI+A+
Sbjct:    1 MAEKDQPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAKDSSTYKPGATTTLGKPQTKKWFCCIQAT 75          
BLAST of GR405185 vs. TrEMBL
Match: C6SWS8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.922e-22
Identity = 53/79 (67.09%), Postives = 60/79 (75.95%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIK-ASAES 293
            M++KG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG N  SP K     H    V  GK Q+KKWFCC++  SAES
Sbjct:    1 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPGKTATDPHSKPAVEPGKTQTKKWFCCMQNPSAES 79          
BLAST of GR405185 vs. TrEMBL
Match: C6SWK6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.734e-21
Identity = 51/79 (64.56%), Postives = 58/79 (73.42%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIK-ASAES 293
            M++KG PLPKFGEWD NDP SAEGFTVIFNKAR+E+KTG N  SP K     H    V  GK Q+KKWFCC++  SAES
Sbjct:    1 MSEKGRPLPKFGEWDDNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPGKTQTKKWFCCMQNPSAES 79          
BLAST of GR405185 vs. TrEMBL
Match: D7TD89_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_57.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030113001 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.007e-20
Identity = 50/79 (63.29%), Postives = 64/79 (81.01%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKAS-AES 293
            M++KG PLPKFG+WDVNDP SA+GFT+IFNKAR+E+KTG    SP K+ ++  KH   L GKPQSKKWFCC++++ AES
Sbjct:    1 MSEKGQPLPKFGDWDVNDPTSADGFTMIFNKARDEKKTGGKPDSPAKE-DSAFKHGADL-GKPQSKKWFCCMQSTYAES 77          
BLAST of GR405185 vs. TrEMBL
Match: B9GFY3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_176203 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.523e-19
Identity = 48/72 (66.67%), Postives = 54/72 (75.00%), Query Frame = 3
Query:   66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKA 281
            D G PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG    SP K ++  H    V   KPQ KKWFCCI++
Sbjct:    1 DTGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGK-VDDSHVKSGVNPAKPQPKKWFCCIQS 71          
BLAST of GR405185 vs. TrEMBL
Match: O22633_ARATH (NOI protein OS=Arabidopsis thaliana GN=At5g55850 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.989e-19
Identity = 49/76 (64.47%), Postives = 54/76 (71.05%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKASA 287
            M+DKG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG    SP K      K       KPQ KKW CC++A A
Sbjct:    1 MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPKKWLCCMQAPA 76          
BLAST of GR405185 vs. TrEMBL
Match: D7UAI8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014701001 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.989e-19
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKA 281
            M+D G PLPKFGEWDVNDPASAEGFTVIFNKAR+E++TG    SP    N  +  Q V   KPQ+KKWFCC++A
Sbjct:    1 MSDNGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKRTGGQPESPANVEN--NVKQGVEPSKPQTKKWFCCLQA 72          
BLAST of GR405185 vs. TrEMBL
Match: B9I1B3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728031 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.870e-19
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKA 281
            M+D G PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG    SP K +++ H    +   K Q KKWFCCI++
Sbjct:    1 MSDTGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGQPESPGKVVDS-HVKPGLNPAKSQPKKWFCCIQS 73          
BLAST of GR405185 vs. TrEMBL
Match: Q6K3Y6_ORYSJ (NOI protein OS=Oryza sativa subsp. japonica GN=P0574F11.33 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.751e-18
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 3
Query:   63 ADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKH---QVVLGGKP-QSKKWFCCIKASA 287
            A+KG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG N  S  +DL  K +    Q +   KP  SKKWFCC++ +A
Sbjct:    3 AEKGSPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGN--SQGQDLAAKSEQPSGQGLYPAKPNSSKKWFCCMQPTA 79          
BLAST of GR405185 vs. TAIR peptide
Match: AT2G04410.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr2:1534012-1535040 REVERSE LENGTH=73)

HSP 1 Score: 101.293 bits (251), Expect = 4.797e-22
Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKA 281
            MADKG PLPKFGEWDVNDP+SAEGFTVIFNKARNE+K G    SP KD    +K+  VL  +  +KKWFCCI+A
Sbjct:    1 MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVL--EKPAKKWFCCIRA 72          
BLAST of GR405185 vs. TAIR peptide
Match: AT5G55850.3 (| Symbols: NOI | RPM1-interacting protein 4 (RIN4) family protein | chr5:22603617-22604850 FORWARD LENGTH=95)

HSP 1 Score: 97.4413 bits (241), Expect = 6.927e-21
Identity = 48/74 (64.86%), Postives = 52/74 (70.27%), Query Frame = 3
Query:   66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKASA 287
            DKG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG    SP K      K       KPQ KKW CC++A A
Sbjct:   19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPKKWLCCMQAPA 92          
BLAST of GR405185 vs. TAIR peptide
Match: AT5G55850.1 (| Symbols: NOI | RPM1-interacting protein 4 (RIN4) family protein | chr5:22603617-22604951 FORWARD LENGTH=114)

HSP 1 Score: 84.7297 bits (208), Expect = 4.646e-17
Identity = 45/76 (59.21%), Postives = 50/76 (65.79%), Query Frame = 3
Query:   60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKASA 287
            M+DKG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG    SP K      K       KPQ  K    + AS+
Sbjct:    1 MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPVKKMALLHASS 76          
BLAST of GR405185 vs. TAIR peptide
Match: AT5G55850.2 (| Symbols: NOI | RPM1-interacting protein 4 (RIN4) family protein | chr5:22603617-22604951 FORWARD LENGTH=130)

HSP 1 Score: 82.4185 bits (202), Expect = 2.306e-16
Identity = 44/74 (59.46%), Postives = 48/74 (64.86%), Query Frame = 3
Query:   66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKASA 287
            DKG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG    SP K      K       KPQ  K    + AS+
Sbjct:   19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPVKKMALLHASS 92          
BLAST of GR405185 vs. TAIR peptide
Match: AT5G63270.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:25365498-25365949 REVERSE LENGTH=80)

HSP 1 Score: 72.7886 bits (177), Expect = 1.827e-13
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 3
Query:   66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKT----GA---NIHSPPKDLNTKHKHQVVLGGKPQSKKWFC 269
            +KG PLPKFGEWDVN+PASAEGFTVIF+KA +E+KT    GA   ++ SP ++ N+   +           KWFC
Sbjct:    4 NKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNNHSSQNPKAKNKWFC 78          
BLAST of GR405185 vs. TAIR peptide
Match: AT2G17660.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr2:7673359-7673568 FORWARD LENGTH=69)

HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-12
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 3
Query:   66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFC 269
            + G  LPKFGEWDVNDPA+A+GFTVIF+KA  ++KTG +        N++ K     G KP  KKW C
Sbjct:    5 EAGRALPKFGEWDVNDPATADGFTVIFSKAGEDKKTGRS----STKTNSQRKQD---GDKPAVKKWLC 65          
BLAST of GR405185 vs. TAIR peptide
Match: AT4G35655.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr4:16910755-16910961 FORWARD LENGTH=68)

HSP 1 Score: 69.3218 bits (168), Expect = 2.020e-12
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 3
Query:   78 PLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFC 269
            PLPKFGEWDVNDPA+AEGFTVIF+KA  ++KTG +    P             G KP +KKW C
Sbjct:    9 PLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTGRSSSKAPSQRKQD-------GVKP-TKKWLC 64          
BLAST of GR405185 vs. TAIR peptide
Match: AT5G40645.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:16280410-16280883 REVERSE LENGTH=73)

HSP 1 Score: 68.5514 bits (166), Expect = 3.446e-12
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 3
Query:   78 PLPKFGEWDVNDPASAEGFTVIFNKARNERKTGAN--IHSPPKDLNTKHKHQVVLGGKPQSKKWFCC 272
            PLPKFGEWDVNDPASAEGFTVIF KAR+++KT A+    S  +D N              +KK FCC
Sbjct:   14 PLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRDNNKSQDE--------PTKKRFCC 72          
BLAST of GR405185 vs. TAIR peptide
Match: AT3G48450.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr3:17944232-17944788 REVERSE LENGTH=89)

HSP 1 Score: 68.1662 bits (165), Expect = 4.500e-12
Identity = 38/79 (48.10%), Postives = 46/79 (58.23%), Query Frame = 3
Query:   78 PLPKFGEWDVNDPASAEGFTVIFNKARNERKT-------GANIHSPPK-------DLNTKHKHQVVLGGKPQS-KKWFC 269
            PLPKFGEWD  +P SAEGFTVIFNKAR+++KT         +I SPP+       + N  H H       P+S KKW C
Sbjct:    9 PLPKFGEWDATNPGSAEGFTVIFNKARDDKKTMKTAVAGPESIVSPPRNEEPPKNNNNHHHNHHTRHSQTPRSKKKWLC 87          
BLAST of GR405185 vs. TAIR peptide
Match: AT3G25070.1 (| Symbols: RIN4 | RPM1 interacting protein 4 | chr3:9132458-9133747 FORWARD LENGTH=211)

HSP 1 Score: 56.9954 bits (136), Expect = 1.038e-8
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 3
Query:   48 PTPTMAD----KGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANI 185
            PT   AD    K   +PKFG+WD N+P+SA+G+T IFNK R ER +GAN+
Sbjct:  133 PTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 182          
The following BLAST results are available for this feature:
BLAST of GR405185 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
RIN4_ARATH1.016e-754.00RPM1-interacting protein 4 OS=Arabidopsis thaliana... [more]
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BLAST of GR405185 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9T1T7_RICCO4.574e-2473.33NOI, putative OS=Ricinus communis GN=RCOM_0691110 ... [more]
B9IAU8_POPTR6.605e-2369.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6SWS8_SOYBN1.922e-2267.09Putative uncharacterized protein OS=Glycine max PE... [more]
C6SWK6_SOYBN4.734e-2164.56Putative uncharacterized protein OS=Glycine max PE... [more]
D7TD89_VITVI4.007e-2063.29Whole genome shotgun sequence of line PN40024, sca... [more]
B9GFY3_POPTR1.523e-1966.67Predicted protein (Fragment) OS=Populus trichocarp... [more]
O22633_ARATH1.989e-1964.47NOI protein OS=Arabidopsis thaliana GN=At5g55850 P... [more]
D7UAI8_VITVI1.989e-1964.86Whole genome shotgun sequence of line PN40024, sca... [more]
B9I1B3_POPTR9.870e-1963.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q6K3Y6_ORYSJ3.751e-1863.29NOI protein OS=Oryza sativa subsp. japonica GN=P05... [more]
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BLAST of GR405185 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10
Match NameE-valueIdentityDescription
AT2G04410.14.797e-2267.57| Symbols: | RPM1-interacting protein 4 (RIN4) fa... [more]
AT5G55850.36.927e-2164.86| Symbols: NOI | RPM1-interacting protein 4 (RIN4)... [more]
AT5G55850.14.646e-1759.21| Symbols: NOI | RPM1-interacting protein 4 (RIN4)... [more]
AT5G55850.22.306e-1659.46| Symbols: NOI | RPM1-interacting protein 4 (RIN4)... [more]
AT5G63270.11.827e-1350.67| Symbols: | RPM1-interacting protein 4 (RIN4) fa... [more]
AT2G17660.11.184e-1251.47| Symbols: | RPM1-interacting protein 4 (RIN4) fa... [more]
AT4G35655.12.020e-1254.69| Symbols: | RPM1-interacting protein 4 (RIN4) fa... [more]
AT5G40645.13.446e-1255.22| Symbols: | RPM1-interacting protein 4 (RIN4) fa... [more]
AT3G48450.14.500e-1248.10| Symbols: | RPM1-interacting protein 4 (RIN4) fa... [more]
AT3G25070.11.038e-854.00| Symbols: RIN4 | RPM1 interacting protein 4 | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..41
score
NoneNo IPR availableSEGsegsegcoord: 6..14
score
NoneNo IPR availableSEGsegsegcoord: 44..55
score
NoneNo IPR availableSEGsegsegcoord: 48..56
score
IPR008700RPM1-interacting protein 4, defence responsePFAMPF05627AvrRpt-cleavagecoord: 21..58
score: 3.1

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR405185 ID=GR405185; Name=GR405185; organism=Cicer arietinum; type=EST; length=655bp
CACACAATACAATTCCCTCTTTCTCTTCTCTTCTCTTCTCTTCTGCACCA
ACTCCAACCATGGCGGACAAGGGTATACCATTGCCCAAGTTTGGGGAATG
GGATGTGAATGATCCAGCTTCAGCTGAGGGATTTACAGTTATTTTCAATA
AAGCTAGGAATGAGAGGAAAACTGGTGCTAACATTCATTCACCACCAAAG
GATCTTAACACCAAGCACAAACATCAAGTTGTTCTTGGTGGCAAGCCCCA
ATCTAAAAAATGGTTTTGCTGCATAAAGGCATCTGCTGAATCATGAGAAG
GCTTTTGAACTCAACATAATTCCGGAAGTCTGGAGCTTCATTCAAAGCTA
TGATGGGTATTGCGGGAATCTTTTTTGTCATGACAGTTCTGTACTTTGGG
CTTGGGGATAAAACAATTAGGAAGCAAATATTATATTATATTTATGATTT
CTAGTGATTTATCACTTGAATTTGTGTTGGTTCAATACATGTTGGATTCA
GTCTTACATGGCAGTTTTTTGGATTCAAGCTTTTTATCGACTCTTCTCTA
TATTGTTTCAAAGTGGTGTTGGTGTTTGTGTATCTATTTTATATTTCATT
TCATGTTGGTATAATCGTTTTATAATGGAGTTTGCGCATGACTTGTACTC
CTTGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave