GR405185
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR405185 vs. SwissProt
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.016e-7 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 48 PTPTMAD----KGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANI 185 PT AD K +PKFG+WD N+P+SA+G+T IFNK R ER +GAN+ Sbjct: 133 PTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 182
BLAST of GR405185 vs. TrEMBL
Match: B9T1T7_RICCO (NOI, putative OS=Ricinus communis GN=RCOM_0691110 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.574e-24 Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKAS 284 MADKG PLPKFGEWDVNDPASAEGFTVIFNKARNE+KTG SP KD N+ +K GKPQSKKWFCCI+++ Sbjct: 1 MADKGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAKD-NSGYKPGTTTLGKPQSKKWFCCIQSA 74
BLAST of GR405185 vs. TrEMBL
Match: B9IAU8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_732478 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.605e-23 Identity = 52/75 (69.33%), Postives = 58/75 (77.33%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKAS 284 MA+K PLPKFGEWDVNDPASAEGFTVIFNKARNE+KTG SP KD +T GKPQ+KKWFCCI+A+ Sbjct: 1 MAEKDQPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAKDSSTYKPGATTTLGKPQTKKWFCCIQAT 75
BLAST of GR405185 vs. TrEMBL
Match: C6SWS8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.922e-22 Identity = 53/79 (67.09%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIK-ASAES 293 M++KG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG N SP K H V GK Q+KKWFCC++ SAES Sbjct: 1 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPGKTATDPHSKPAVEPGKTQTKKWFCCMQNPSAES 79
BLAST of GR405185 vs. TrEMBL
Match: C6SWK6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.734e-21 Identity = 51/79 (64.56%), Postives = 58/79 (73.42%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIK-ASAES 293 M++KG PLPKFGEWD NDP SAEGFTVIFNKAR+E+KTG N SP K H V GK Q+KKWFCC++ SAES Sbjct: 1 MSEKGRPLPKFGEWDDNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPGKTQTKKWFCCMQNPSAES 79
BLAST of GR405185 vs. TrEMBL
Match: D7TD89_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_57.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030113001 PE=4 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.007e-20 Identity = 50/79 (63.29%), Postives = 64/79 (81.01%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKAS-AES 293 M++KG PLPKFG+WDVNDP SA+GFT+IFNKAR+E+KTG SP K+ ++ KH L GKPQSKKWFCC++++ AES Sbjct: 1 MSEKGQPLPKFGDWDVNDPTSADGFTMIFNKARDEKKTGGKPDSPAKE-DSAFKHGADL-GKPQSKKWFCCMQSTYAES 77
BLAST of GR405185 vs. TrEMBL
Match: B9GFY3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_176203 PE=4 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.523e-19 Identity = 48/72 (66.67%), Postives = 54/72 (75.00%), Query Frame = 3 Query: 66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKA 281 D G PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG SP K ++ H V KPQ KKWFCCI++ Sbjct: 1 DTGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGK-VDDSHVKSGVNPAKPQPKKWFCCIQS 71
BLAST of GR405185 vs. TrEMBL
Match: O22633_ARATH (NOI protein OS=Arabidopsis thaliana GN=At5g55850 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.989e-19 Identity = 49/76 (64.47%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKASA 287 M+DKG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG SP K K KPQ KKW CC++A A Sbjct: 1 MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPKKWLCCMQAPA 76
BLAST of GR405185 vs. TrEMBL
Match: D7UAI8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014701001 PE=4 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.989e-19 Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKA 281 M+D G PLPKFGEWDVNDPASAEGFTVIFNKAR+E++TG SP N + Q V KPQ+KKWFCC++A Sbjct: 1 MSDNGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKRTGGQPESPANVEN--NVKQGVEPSKPQTKKWFCCLQA 72
BLAST of GR405185 vs. TrEMBL
Match: B9I1B3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728031 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.870e-19 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKA 281 M+D G PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG SP K +++ H + K Q KKWFCCI++ Sbjct: 1 MSDTGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGQPESPGKVVDS-HVKPGLNPAKSQPKKWFCCIQS 73
BLAST of GR405185 vs. TrEMBL
Match: Q6K3Y6_ORYSJ (NOI protein OS=Oryza sativa subsp. japonica GN=P0574F11.33 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.751e-18 Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 3 Query: 63 ADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKH---QVVLGGKP-QSKKWFCCIKASA 287 A+KG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG N S +DL K + Q + KP SKKWFCC++ +A Sbjct: 3 AEKGSPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGN--SQGQDLAAKSEQPSGQGLYPAKPNSSKKWFCCMQPTA 79
BLAST of GR405185 vs. TAIR peptide
Match: AT2G04410.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr2:1534012-1535040 REVERSE LENGTH=73) HSP 1 Score: 101.293 bits (251), Expect = 4.797e-22 Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKA 281 MADKG PLPKFGEWDVNDP+SAEGFTVIFNKARNE+K G SP KD +K+ VL + +KKWFCCI+A Sbjct: 1 MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVL--EKPAKKWFCCIRA 72
BLAST of GR405185 vs. TAIR peptide
Match: AT5G55850.3 (| Symbols: NOI | RPM1-interacting protein 4 (RIN4) family protein | chr5:22603617-22604850 FORWARD LENGTH=95) HSP 1 Score: 97.4413 bits (241), Expect = 6.927e-21 Identity = 48/74 (64.86%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKASA 287 DKG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG SP K K KPQ KKW CC++A A Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPKKWLCCMQAPA 92
BLAST of GR405185 vs. TAIR peptide
Match: AT5G55850.1 (| Symbols: NOI | RPM1-interacting protein 4 (RIN4) family protein | chr5:22603617-22604951 FORWARD LENGTH=114) HSP 1 Score: 84.7297 bits (208), Expect = 4.646e-17 Identity = 45/76 (59.21%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 60 MADKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKASA 287 M+DKG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG SP K K KPQ K + AS+ Sbjct: 1 MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPVKKMALLHASS 76
BLAST of GR405185 vs. TAIR peptide
Match: AT5G55850.2 (| Symbols: NOI | RPM1-interacting protein 4 (RIN4) family protein | chr5:22603617-22604951 FORWARD LENGTH=130) HSP 1 Score: 82.4185 bits (202), Expect = 2.306e-16 Identity = 44/74 (59.46%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFCCIKASA 287 DKG PLPKFGEWDVNDPASAEGFTVIFNKAR+E+KTG SP K K KPQ K + AS+ Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPVKKMALLHASS 92
BLAST of GR405185 vs. TAIR peptide
Match: AT5G63270.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:25365498-25365949 REVERSE LENGTH=80) HSP 1 Score: 72.7886 bits (177), Expect = 1.827e-13 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKT----GA---NIHSPPKDLNTKHKHQVVLGGKPQSKKWFC 269 +KG PLPKFGEWDVN+PASAEGFTVIF+KA +E+KT GA ++ SP ++ N+ + KWFC Sbjct: 4 NKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNNHSSQNPKAKNKWFC 78
BLAST of GR405185 vs. TAIR peptide
Match: AT2G17660.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr2:7673359-7673568 FORWARD LENGTH=69) HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-12 Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 3 Query: 66 DKGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFC 269 + G LPKFGEWDVNDPA+A+GFTVIF+KA ++KTG + N++ K G KP KKW C Sbjct: 5 EAGRALPKFGEWDVNDPATADGFTVIFSKAGEDKKTGRS----STKTNSQRKQD---GDKPAVKKWLC 65
BLAST of GR405185 vs. TAIR peptide
Match: AT4G35655.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr4:16910755-16910961 FORWARD LENGTH=68) HSP 1 Score: 69.3218 bits (168), Expect = 2.020e-12 Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 3 Query: 78 PLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANIHSPPKDLNTKHKHQVVLGGKPQSKKWFC 269 PLPKFGEWDVNDPA+AEGFTVIF+KA ++KTG + P G KP +KKW C Sbjct: 9 PLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTGRSSSKAPSQRKQD-------GVKP-TKKWLC 64
BLAST of GR405185 vs. TAIR peptide
Match: AT5G40645.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:16280410-16280883 REVERSE LENGTH=73) HSP 1 Score: 68.5514 bits (166), Expect = 3.446e-12 Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 78 PLPKFGEWDVNDPASAEGFTVIFNKARNERKTGAN--IHSPPKDLNTKHKHQVVLGGKPQSKKWFCC 272 PLPKFGEWDVNDPASAEGFTVIF KAR+++KT A+ S +D N +KK FCC Sbjct: 14 PLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRDNNKSQDE--------PTKKRFCC 72
BLAST of GR405185 vs. TAIR peptide
Match: AT3G48450.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr3:17944232-17944788 REVERSE LENGTH=89) HSP 1 Score: 68.1662 bits (165), Expect = 4.500e-12 Identity = 38/79 (48.10%), Postives = 46/79 (58.23%), Query Frame = 3 Query: 78 PLPKFGEWDVNDPASAEGFTVIFNKARNERKT-------GANIHSPPK-------DLNTKHKHQVVLGGKPQS-KKWFC 269 PLPKFGEWD +P SAEGFTVIFNKAR+++KT +I SPP+ + N H H P+S KKW C Sbjct: 9 PLPKFGEWDATNPGSAEGFTVIFNKARDDKKTMKTAVAGPESIVSPPRNEEPPKNNNNHHHNHHTRHSQTPRSKKKWLC 87
BLAST of GR405185 vs. TAIR peptide
Match: AT3G25070.1 (| Symbols: RIN4 | RPM1 interacting protein 4 | chr3:9132458-9133747 FORWARD LENGTH=211) HSP 1 Score: 56.9954 bits (136), Expect = 1.038e-8 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 48 PTPTMAD----KGIPLPKFGEWDVNDPASAEGFTVIFNKARNERKTGANI 185 PT AD K +PKFG+WD N+P+SA+G+T IFNK R ER +GAN+ Sbjct: 133 PTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 182 The following BLAST results are available for this feature:
BLAST of GR405185 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR405185 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR405185 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR405185 ID=GR405185; Name=GR405185; organism=Cicer arietinum; type=EST; length=655bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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