GR407280

EST Overview


Name	GR407280
Unique Name	GR407280
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	771

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR407280 vs. SwissProt
Match: PCBP3_HUMAN (Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.672e-15
Identity = 68/254 (26.77%), Postives = 108/254 (42.52%), Query Frame = 3

Query:   18 TMGSNTEDPNPSFKRTYSHVV----------FRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVL-----DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPP-----PDRTK-------MMGTRPYEVFQHETYAVPH-EGLTDLNMDYRQQ 695
            T+ + +  P P F R     V           RLL H   VG+IIGK G  +K +++ +GA+I I +   + PER++ +            + P +A+ K F  +      D+  + +         V+ RL+    Q GS+IGKGG  +++IR  TG +++V  D LP     ++  + I G               + E PP     P R K         G + Y +     YA+PH + LT L+    QQ
Sbjct:   17 TLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTI--QGQYAIPHPDQLTKLHQLAMQQ 251

[Close]

BLAST of GR407280 vs. SwissProt
Match: PCBP3_MOUSE (Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.535e-14
Identity = 62/225 (27.56%), Postives = 100/225 (44.44%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVL-----DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPP-----PDRTK-------MMGTRPYEVFQHETYAVPH-EGLTDLNMDYRQQ 695
            +  RLL H   VG+IIGK G  +K +++ +GA+I I +   + PER++ +            + P +A+ K F  +      D+  + +         V+ RL+    Q GS+IGKGG  +++IR  TG +++V  D LP     ++  + I G               + E PP     P R K         G + Y +     YA+PH + LT L+    QQ
Sbjct:   46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI------------TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTI--QGQYAIPHPDQLTKLHQLAMQQ 251

[Close]

BLAST of GR407280 vs. SwissProt
Match: PCBP2_MOUSE (Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.535e-14
Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVL-----DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLP 479
            +  RLL H   VG+IIGK G  +K +++ +GA+I I +   + PER+I             ++ P  A+ K F  ++     D++++ T  T      V+ RL+    Q GS+IGKGG  +++IR  TG +++V  D LP
Sbjct:   14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139

[Close]

BLAST of GR407280 vs. SwissProt
Match: PCBP2_HUMAN (Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.535e-14
Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVL-----DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLP 479
            +  RLL H   VG+IIGK G  +K +++ +GA+I I +   + PER+I             ++ P  A+ K F  ++     D++++ T  T      V+ RL+    Q GS+IGKGG  +++IR  TG +++V  D LP
Sbjct:   14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT------------LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139

[Close]

BLAST of GR407280 vs. SwissProt
Match: PCBP1_RABIT (Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.258e-13
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVL-----DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLP 479
            +  RLL H   VG+IIGK G  +K +++ +GA+I I +   + PER+I             ++ P  A+ K F  ++     D+ ++ T  T      V+ RL+    Q GS+IGKGG  +++IR  TG +++V  D LP
Sbjct:   14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIIT------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139

[Close]

BLAST of GR407280 vs. SwissProt
Match: PCBP1_MOUSE (Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.258e-13
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVL-----DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLP 479
            +  RLL H   VG+IIGK G  +K +++ +GA+I I +   + PER+I             ++ P  A+ K F  ++     D+ ++ T  T      V+ RL+    Q GS+IGKGG  +++IR  TG +++V  D LP
Sbjct:   14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIIT------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139

[Close]

BLAST of GR407280 vs. SwissProt
Match: PCBP1_HUMAN (Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.258e-13
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVL-----DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLP 479
            +  RLL H   VG+IIGK G  +K +++ +GA+I I +   + PER+I             ++ P  A+ K F  ++     D+ ++ T  T      V+ RL+    Q GS+IGKGG  +++IR  TG +++V  D LP
Sbjct:   14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIIT------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139

[Close]

BLAST of GR407280 vs. SwissProt
Match: PCBP1_BOVIN (Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.258e-13
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVL-----DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLP 479
            +  RLL H   VG+IIGK G  +K +++ +GA+I I +   + PER+I             ++ P  A+ K F  ++     D+ ++ T  T      V+ RL+    Q GS+IGKGG  +++IR  TG +++V  D LP
Sbjct:   14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIIT------------LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139

[Close]

BLAST of GR407280 vs. SwissProt
Match: Y4837_ARATH (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.155e-13
Identity = 61/195 (31.28%), Postives = 94/195 (48.21%), Query Frame = 3

Query:    9 KKWTMGSNTEDPNPSFKRTYSH--------VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIV----KLDGQGVPDVSKPP-----EALLKVFERVLDVAAAETEGTDVG---DRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRV----LNDKLPVFSKPSDEIIEIQG 521
            K+  +  N  + N + KR  SH        VV+R+LC    VG +IGKSG VI +++  T AKI++ D      +RVI +      K +  G       P     +ALLKV++ +  VA+ E   T      D    CRLL    Q+ S+IGK G+ +++IR  T   ++V    ++D   V +   D ++ I G
Sbjct:    6 KRKQIQRNNSESNRNQKRRISHDKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAI--VASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISG 198

HSP 2 Score: 59.3066 bits (142), Expect = 2.715e-8
Identity = 47/181 (25.97%), Postives = 78/181 (43.09%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRP 617
            +VF++LC    +  +IGK GS IK +++ +G+ I ++D+     +   V+IV          S   EA+L + E + D  A            V  +LL +    G VIGK G V+ +IR  T   I +   K        D+++E+ G              RL+E    D+  +   +P
Sbjct:  312 LVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEN----------VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGK-------KDDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVATRKP 475

[Close]

BLAST of GR407280 vs. SwissProt
Match: IF2B3_MOUSE (Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus GN=Igf2bp3 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.189e-9
Identity = 46/166 (27.71%), Postives = 78/166 (46.99%), Query Frame = 3

Query:   27 SNTEDPNPSFKRTYSHVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGN 524
            S    P P F+++ +  V  L   +  VGAIIGK G  IK L +  GA I+I  AP ++P+  + +++         ++ PPEA  K   R+      E   +   +  +   +      AG VIGKGGK V +++  +   + V  D+ P   +    +++I G+
Sbjct:  391 STLTPPYPQFEQSETETV-HLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVI---------ITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTP--DENDQVVVKITGH 542

[Close]

BLAST of GR407280 vs. TrEMBL
Match: B9IJ63_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825463 PE=4 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 6.343e-48
Identity = 116/261 (44.44%), Postives = 154/261 (59.00%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGV--------PDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYEVFQHETYAVPHEGLTDLNMDYRQQRSSALPTSSIGSDGNP--------------------SKVHPFSAE 770
            HV FRLLCH+SR+G +IGK+G++IK LQQ TGAK+RI+DAP DSP+RVI VI  +    V         +VSK  EAL++VFER+L+VAA   E   V D VVSCR+LA     G+VIGKGGKVVEKIR D GCRI+VL DKLP  +  ++E+IEI+G+              LQ+C P D+T++  ++P E       AV    L+D+ ++   + S+ LPT +  S   P                    S+VHP S E
Sbjct:   35 HVSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVVFSRIESAVEVSKGQEALVRVFERILEVAA---ESDSVADGVVSCRMLAEVSSVGAVIGKGGKVVEKIRKDCGCRIKVLVDKLPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQDCQPVDKTRVTNSKPAE-------AVSRVSLSDVRVEIHPRHSAVLPTIAQNSSVLPTIPQHSLGLPTIPKSSINYASRVHPLSLE 285

HSP 2 Score: 78.5666 bits (192), Expect = 6.625e-13
Identity = 47/155 (30.32%), Postives = 84/155 (54.19%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGD---RVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL--NDKLPVFSKPSDEIIEIQGN 524
            +VFR+LC + R+G +IGK G+++++LQ  TGA I +     +  ER+I V    + +     S   + ++ VF R   V +   +G D G      V+ RL+ +  Q G ++GKGG ++ ++R  T   IR++  + + P     +D ++EI G+
Sbjct:  300 LVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPES--RYSAAQKTIVLVFSRA--VESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGD 450

[Close]

BLAST of GR407280 vs. TrEMBL
Match: B9S9M0_RICCO (Poly(RC)-binding protein, putative OS=Ricinus communis GN=RCOM_0886780 PE=4 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.370e-47
Identity = 110/226 (48.67%), Postives = 153/226 (67.70%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVI--------VKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDV---GDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYEVFQHETYAVPHEGLTDLNMDYRQQRSSALPT 716
            HV FRLLCH+SR+G IIGKSG++IK LQQ +GAKIRI+++P +S +RVI VI        V+++ + V DVS+  E L++VFER+L+VAA E++G +V   G  VVSCR+LA   QAGSVIGKGGKVVEKIR D G +IRVL DKLPV + P++E+IEI+G+              LQ+C P D+ ++  ++ +E       AVP E L ++ ++   QR+  +PT
Sbjct:   55 HVSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKVRVESEEV-DVSRAQEGLIRVFERILEVAA-ESDGINVVAGGGGVVSCRMLAGSKQAGSVIGKGGKVVEKIRKDCGVKIRVLTDKLPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQDCQPVDKPRVGSSKYFE-------AVPQEPLPEMRVEIAPQRNIMVPT 271

HSP 2 Score: 78.5666 bits (192), Expect = 6.625e-13
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3

Query:   42 PNPSFKRTYSHVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQGN 524
            P+   K     VVF++LC +  VG +IGK G++IK+LQ  TGA I I     +S ER+I VI           S+ PE+     ++ +               +V  RL+    Q G ++GKGG ++  +R  TG  I++L  D+LP     ++++++I G+
Sbjct:  294 PSLDMKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVI----------ASENPESRYSAAQKAV--------------VLVFSRLVVPSNQVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGD 431

[Close]

BLAST of GR407280 vs. TrEMBL
Match: B9HEA8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_562363 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.323e-45
Identity = 114/261 (43.68%), Postives = 152/261 (58.24%), Query Frame = 3

Query:   42 PNPSFKRTYS-----HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVP--------DVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYEVFQHETYAVPHEGLTDLNMDYR-----QQRSSALPTSSIGSDGNPSKVHPFSAE 770
            P+PS     S     HV+FRLLCH SR+G IIGK G++IK LQQ TGAKIRI+DAP +SP+RVI ++  +    V         +VSK  EAL++VFER+L+VAA   E   V   +VSCRLLA     G+VIGKGGK VEKIR D GC+++VL DKLP  +  ++E+IEI+G+             RLQ+C P D+T+++ ++P E     ++  P  G+  L           Q S A PT +  S    S  H FS E
Sbjct:   42 PHPSTSAAPSPVPSGHVLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQSSVVFSGIGSAIEVSKGQEALVRVFERILEVAA---ESDSVAGGLVSCRLLAEISSVGAVIGKGGKTVEKIRKDCGCKVKVLIDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQDCQPVDKTRVISSKPVEAVSRVSF--PEVGVEILPQHSAVRPTIAQHSVAPPTVTNSSIDYASGTHLFSLE 297

HSP 2 Score: 78.5666 bits (192), Expect = 6.625e-13
Identity = 52/155 (33.55%), Postives = 83/155 (53.55%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGD---RVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL--NDKLPVFSKPSDEIIEIQGN 524
            VVFR+LC++ RVG +IGK G+++ +LQ  TGA I I        ER+I V    + +     S   + ++ VF RV  V +   +G D G      VS RL+ +  Q G ++GKGG ++ ++R  T   IR++  +   P     +D ++EI G+
Sbjct:  313 VVFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPKVAGCDERLITVTASENPES--RYSAAQKTVVLVFSRV--VESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRIIGRDQGNPKCVPENDHVVEILGD 463

[Close]

BLAST of GR407280 vs. TrEMBL
Match: A2Q1N8_MEDTR (KH, type 1 OS=Medicago truncatula GN=MtrDRAFT_AC148971g21v2 PE=4 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.581e-41
Identity = 94/160 (58.75%), Postives = 118/160 (73.75%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKL-------------DGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIE 512
            HV FRLLC+SSR+G +IGKSG+VIK+LQ  TGAKIRI+D+P +SP+RVI+VI                DG+ + +VSK  EALL+VF+R+L+VAA E EG ++GDR VSCRL+A+  QAGSVIGKGGKVVEKI+ DTGC+I V  D LP      DE+IE
Sbjct:   47 HVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAI-EVSKAQEALLRVFDRILEVAA-EMEGIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIE 204

[Close]

BLAST of GR407280 vs. TrEMBL
Match: D7MRA9_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_686162 PE=4 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 8.892e-34
Identity = 96/257 (37.35%), Postives = 133/257 (51.75%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQ-----GV--------------PDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYEVFQHETYAVPHEGLTDLNM---------DYRQQRSSALPTSSIGSDGNPSKVHP 758
            H  FRLLC  S VGA+IGKSG+VIK LQQ TGAKIR+++ P  SP+RVI +I + D +     GV               +VSK   AL+KVFE +   A ++T         V CRLL     AG+VIGKGG++V  IR +TGC+I +  + LP+ +   DE++EI+GN              LQ C   D+ +M+G RP E     +   P E +   ++         DYR ++    P    G+   PS V+P
Sbjct:   44 HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKLGVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT---------VVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRTENLPICADTDDEMVEIEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSIEVNPYDYRLRKDEIFPR---GTLARPSDVNP 288

HSP 2 Score: 77.0258 bits (188), Expect = 1.928e-12
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDRV-VSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEIQG 521
            VVF++LC +   G +IG  G V++ L   TGA I + +   D  ER+I V    +    P+    P  +A++ +F R+ +++  +    D G R  ++ RL+    Q G V+GKGG +V ++R  TG  I++L  ++ P     +D++I+I G
Sbjct:  460 VVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPEN----PECQSSPAQKAIMLLFSRLFELSTKKI--LDNGPRTSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGATIQILKVEQNPKCVSENDQVIQITG 606

[Close]

BLAST of GR407280 vs. TrEMBL
Match: A5AKJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022037 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.981e-33
Identity = 85/174 (48.85%), Postives = 114/174 (65.52%), Query Frame = 3

Query:   33 TEDPNPSFKRTYSHVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVI--------VKLDGQGVP-DVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEIQGN 524
            ++ P P       HV FRLLCH+SR+G +IGKSG ++K LQ  TGA+IR++D+P  S  RVI+VI        + L G     + S   EA+L+VFER+L+VAA   +G   G  VVSCRLLA   Q GSVIGKGGKVVEKIR ++G +I+VL  +KLP  +  +DE++E  G+
Sbjct:   37 SKPPPPPIPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIALQGSSEEVEASAAQEAVLRVFERILEVAAV-VDGVPPGG-VVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGS 208

[Close]

BLAST of GR407280 vs. TrEMBL
Match: Q9FMF0_ARATH (Similarity to RNA-binding protein OS=Arabidopsis thaliana GN=At5g64390 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.677e-32
Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQG-------------------VPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYE 623
            H  FRLLC  S VGA+IGKSG+VIK LQQ TGAKIR+++ P  SP+RVI +I + D +                      +VSK   AL+KVFE +   A ++T         V CRLL     AG+VIGKGG++V  IR +TGC+I +  + LP+ +   DE++E++GN              LQ C   D+ +M+G RP E
Sbjct:   46 HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT---------VVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLE 239

HSP 2 Score: 77.411 bits (189), Expect = 1.476e-12
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDR-VVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEIQG 521
            VVF++LC +   G +IG  G V++ L   TGA I + +   D  ER+I V    +    P+    P  +A++ +F R+ ++A  +    D G R  ++ RL+    Q G V+GKGG +V ++R  TG  I++L  ++ P     +D++++I G
Sbjct:  452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASEN----PECQSSPAQKAIMLIFSRLFELATNKI--LDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITG 598

[Close]

BLAST of GR407280 vs. TrEMBL
Match: Q84ZX0_ARATH (HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.677e-32
Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQG-------------------VPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYE 623
            H  FRLLC  S VGA+IGKSG+VIK LQQ TGAKIR+++ P  SP+RVI +I + D +                      +VSK   AL+KVFE +   A ++T         V CRLL     AG+VIGKGG++V  IR +TGC+I +  + LP+ +   DE++E++GN              LQ C   D+ +M+G RP E
Sbjct:   46 HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT---------VVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLE 239

HSP 2 Score: 77.0258 bits (188), Expect = 1.928e-12
Identity = 48/151 (31.79%), Postives = 83/151 (54.97%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDR-VVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEI 515
            VVF++LC +   G +IG  G V++ L   TGA I + +A  D  ER+I V    +    P+    P  +A++ +F R+ ++A  +    D G R  ++ RL+    Q G V+GKGG +V ++R  TG  I++L  ++ P     +D++++I
Sbjct:  464 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASEN----PECQSSPAQKAIMLIFSRLFELATNKI--LDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQI 608

[Close]

BLAST of GR407280 vs. TrEMBL
Match: Q84ZW9_ARATH (HEN4 isoform 2 OS=Arabidopsis thaliana GN=HEN4 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.677e-32
Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQG-------------------VPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYE 623
            H  FRLLC  S VGA+IGKSG+VIK LQQ TGAKIR+++ P  SP+RVI +I + D +                      +VSK   AL+KVFE +   A ++T         V CRLL     AG+VIGKGG++V  IR +TGC+I +  + LP+ +   DE++E++GN              LQ C   D+ +M+G RP E
Sbjct:   46 HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT---------VVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLE 239

HSP 2 Score: 77.0258 bits (188), Expect = 1.928e-12
Identity = 48/151 (31.79%), Postives = 83/151 (54.97%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDR-VVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEI 515
            VVF++LC +   G +IG  G V++ L   TGA I + +A  D  ER+I V    +    P+    P  +A++ +F R+ ++A  +    D G R  ++ RL+    Q G V+GKGG +V ++R  TG  I++L  ++ P     +D++++I
Sbjct:  464 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASEN----PECQSSPAQKAIMLIFSRLFELATNKI--LDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQI 608

[Close]

BLAST of GR407280 vs. TrEMBL
Match: A9RYT2_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_31719 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.225e-26
Identity = 75/188 (39.89%), Postives = 109/188 (57.98%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQ--------GVPDVSKPPEALLKVFERVLDVAAAETEGTDVGD------RVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDR 593
            VVFR+LC + ++G++IGK GS+IK+L+Q +GAKI+I DA P   ERVI++     G            +++   EAL KV  R+  +A  ET G D  D      + V  RLL    Q G ++GKGGK++E++R  TG +IRVL  D+LP  + P+DE++++ G+             RLQE PP DR
Sbjct:    3 VVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGNDRGRGKDGNSEELTPAQEALFKVHARI--IADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARLQENPPRDR 188

HSP 2 Score: 98.5969 bits (244), Expect = 6.187e-19
Identity = 62/154 (40.26%), Postives = 96/154 (62.34%), Query Frame = 3

Query:   69 SHVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVV-IVKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQGN 524
            + +VFRLLC S ++G++IGK GS+I +L++ TGA+I+I +A P S ERVI+V  ++L G      S   EA+++V  R+     AE  G    D +++ RLL    Q G ++GKGG ++E +R  T   IRVL  D LP  +  +DE+++I G+
Sbjct:  258 NELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPGD---SFSPALEAMIQVQSRI----TAEMGGDK--DGIITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGD 402

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT5G64390.3 (| Symbols: HEN4 | RNA-binding KH domain-containing protein | chr5:25743442-25747380 FORWARD LENGTH=866)

HSP 1 Score: 143.665 bits (361), Expect = 1.094e-34
Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQG-------------------VPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYE 623
            H  FRLLC  S VGA+IGKSG+VIK LQQ TGAKIR+++ P  SP+RVI +I + D +                      +VSK   AL+KVFE +   A ++T         V CRLL     AG+VIGKGG++V  IR +TGC+I +  + LP+ +   DE++E++GN              LQ C   D+ +M+G RP E
Sbjct:   46 HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT---------VVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLE 239

HSP 2 Score: 77.411 bits (189), Expect = 9.625e-15
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDR-VVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEIQG 521
            VVF++LC +   G +IG  G V++ L   TGA I + +   D  ER+I V    +    P+    P  +A++ +F R+ ++A  +    D G R  ++ RL+    Q G V+GKGG +V ++R  TG  I++L  ++ P     +D++++I G
Sbjct:  452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASEN----PECQSSPAQKAIMLIFSRLFELATNKI--LDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITG 598

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT5G64390.1 (| Symbols: HEN4 | RNA-binding KH domain-containing protein | chr5:25743442-25747380 FORWARD LENGTH=857)

HSP 1 Score: 143.665 bits (361), Expect = 1.094e-34
Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQG-------------------VPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYE 623
            H  FRLLC  S VGA+IGKSG+VIK LQQ TGAKIR+++ P  SP+RVI +I + D +                      +VSK   AL+KVFE +   A ++T         V CRLL     AG+VIGKGG++V  IR +TGC+I +  + LP+ +   DE++E++GN              LQ C   D+ +M+G RP E
Sbjct:   46 HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT---------VVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLE 239

HSP 2 Score: 77.411 bits (189), Expect = 9.625e-15
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDR-VVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEIQG 521
            VVF++LC +   G +IG  G V++ L   TGA I + +   D  ER+I V    +    P+    P  +A++ +F R+ ++A  +    D G R  ++ RL+    Q G V+GKGG +V ++R  TG  I++L  ++ P     +D++++I G
Sbjct:  452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASEN----PECQSSPAQKAIMLIFSRLFELATNKI--LDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITG 598

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT5G64390.2 (| Symbols: HEN4 | RNA-binding KH domain-containing protein | chr5:25743442-25746742 FORWARD LENGTH=824)

HSP 1 Score: 143.665 bits (361), Expect = 1.094e-34
Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 3

Query:   72 HVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQG-------------------VPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPYE 623
            H  FRLLC  S VGA+IGKSG+VIK LQQ TGAKIR+++ P  SP+RVI +I + D +                      +VSK   AL+KVFE +   A ++T         V CRLL     AG+VIGKGG++V  IR +TGC+I +  + LP+ +   DE++E++GN              LQ C   D+ +M+G RP E
Sbjct:   46 HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDT---------VVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLE 239

HSP 2 Score: 77.411 bits (189), Expect = 9.625e-15
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDR-VVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEIQG 521
            VVF++LC +   G +IG  G V++ L   TGA I + +   D  ER+I V    +    P+    P  +A++ +F R+ ++A  +    D G R  ++ RL+    Q G V+GKGG +V ++R  TG  I++L  ++ P     +D++++I G
Sbjct:  452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASEN----PECQSSPAQKAIMLIFSRLFELATNKI--LDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITG 598

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT1G51580.1 (| Symbols: | RNA-binding KH domain-containing protein | chr1:19125612-19128102 FORWARD LENGTH=621)

HSP 1 Score: 107.071 bits (266), Expect = 1.134e-23
Identity = 73/208 (35.10%), Postives = 104/208 (50.00%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIR-IDDAPPDSPERVIVVIV----KLDGQGVPDVSKPPE----------------------------ALLKVFERVL---DVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLN-DKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPP 587
            V FRLLC ++R GAIIGK GSVI+ LQ +TG+KIR IDD P  S ERV+++I     K D   V D   P                              ALL+VFER++   D A  + +  D G+    CR++  G Q   ++ KGGK+++KIR D+G  +R+ + D++P  + P D +I++ G               LQE   P
Sbjct:   19 VHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPGDVVIQMNGKFSSVKKALLLVTNCLQESGAP 226

HSP 2 Score: 92.0485 bits (227), Expect = 3.776e-19
Identity = 56/179 (31.28%), Postives = 98/179 (54.75%), Query Frame = 3

Query:   75 VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMG 608
            V FRLLC + +VG++IGK G+V+++LQ  +GA I++ D   DS ER+IV+  + + +    +++  + +++V  R++++      G +    VV+ RLL +    G ++GKGG ++ ++R  TG  IRV   D+   +    DEI+++ GN             RL+E   P R    G
Sbjct:  276 VAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQ--DGVMRVHNRIVEI------GFEPSAAVVA-RLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQG 445

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT5G15270.1 (| Symbols: | RNA-binding KH domain-containing protein | chr5:4958738-4960947 FORWARD LENGTH=548)

HSP 1 Score: 106.301 bits (264), Expect = 1.935e-23
Identity = 61/187 (32.62%), Postives = 103/187 (55.08%), Query Frame = 3

Query:   78 VFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLD-----GQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDK-LPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPY 620
            VFR LC   ++G++IG+ G ++K L+  T +KIRI +A P   ERVI +    D     G G   +S   +AL ++ +RV+    A +E +  G++ V+ +LL    Q G ++G+GG++V+ IR +TG +IR++ D+ +P+ +  SDE+I+I G              RL E P   +  +  +  Y
Sbjct:   51 VFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV-ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGGY 236

HSP 2 Score: 59.3066 bits (142), Expect = 2.712e-9
Identity = 40/148 (27.03%), Postives = 75/148 (50.68%), Query Frame = 3

Query:   84 RLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP-EALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQG 521
            RL+     + ++IGK G++I  L+Q T A I++D +  +  + +I +  +   +   D   P  EA++++  +  D         D G    + RLL    + G ++GKGG ++ ++R  T   IR+L  + LP  +   DE+++I G
Sbjct:  287 RLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAR---EVFEDAYSPTIEAVMRLQPKCSDKVER-----DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISG 426

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT5G15270.2 (| Symbols: | RNA-binding KH domain-containing protein | chr5:4958738-4960947 FORWARD LENGTH=548)

HSP 1 Score: 106.301 bits (264), Expect = 1.935e-23
Identity = 61/187 (32.62%), Postives = 103/187 (55.08%), Query Frame = 3

Query:   78 VFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLD-----GQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDK-LPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMGTRPY 620
            VFR LC   ++G++IG+ G ++K L+  T +KIRI +A P   ERVI +    D     G G   +S   +AL ++ +RV+    A +E +  G++ V+ +LL    Q G ++G+GG++V+ IR +TG +IR++ D+ +P+ +  SDE+I+I G              RL E P   +  +  +  Y
Sbjct:   51 VFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV-ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGGY 236

HSP 2 Score: 59.3066 bits (142), Expect = 2.712e-9
Identity = 40/148 (27.03%), Postives = 75/148 (50.68%), Query Frame = 3

Query:   84 RLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP-EALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQG 521
            RL+     + ++IGK G++I  L+Q T A I++D +  +  + +I +  +   +   D   P  EA++++  +  D         D G    + RLL    + G ++GKGG ++ ++R  T   IR+L  + LP  +   DE+++I G
Sbjct:  287 RLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAR---EVFEDAYSPTIEAVMRLQPKCSDKVER-----DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISG 426

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT5G53060.1 (| Symbols: | RNA-binding KH domain-containing protein | chr5:21515355-21518197 FORWARD LENGTH=652)

HSP 1 Score: 103.219 bits (256), Expect = 1.638e-22
Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 3

Query:   24 GSNTEDPNPSFKRTYSHVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVI--VKLDGQG-VPDVSKPPEALLKVFERVLDVAA------------AETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL--NDKLPVFSKPSDEIIEIQGNXXXXXXXXXXXXXRLQECPPPDRTKMMG 608
            G     P+ S   T +   +R+LCH ++ G +IGKSG++IKS++Q TGA I + +  P   ER+I +    + D  G +P  S   EAL  V +R+L+  A             +  G   G   V  RL+ +    G ++GKGGK++E++RI+T   IR+L     LP     S+EI++I G              RL+E    DR+   G
Sbjct:   51 GGGNGRPSKSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSRLRESQHRDRSNFQG 262

HSP 2 Score: 58.5362 bits (140), Expect = 4.627e-9
Identity = 44/162 (27.16%), Postives = 83/162 (51.23%), Query Frame = 3

Query:   48 PSFKRTYSH-VVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQG 521
            P  +  YS  +VF++LC + ++  ++G+S  +I  LQ   G  +R+ D    S E++I +      +  PD    P  EALL +  +++D+   +       D +++ RLL     +  + GK G V E  R+ TG  +++L  +++P  +  +D +I+I G
Sbjct:  315 PVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITI----SSEEAPDDPFFPAQEALLHIQTQIIDLIPDK-------DNLITTRLLVPSRDSICLEGKAGSVSEISRL-TGTSVQILAREEIPRCASINDVVIQITG 464

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT3G04610.1 (| Symbols: FLK | RNA-binding KH domain-containing protein | chr3:1250762-1254272 REVERSE LENGTH=577)

HSP 1 Score: 97.4413 bits (241), Expect = 8.987e-21
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 3

Query:   78 VFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPP--EALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQG 521
            VFR+L  + +VG+IIG+ G VIK + + T A+I+I D PP + ER ++V     G+  P+ S PP  + LL+V  R++D    E        + VS RLL    QAGS+IGK G  V+ I+  + C +RVL ++ LPVF+   D ++E+ G
Sbjct:  188 VFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV----SGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSK-VSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVG 333

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT5G09560.1 (| Symbols: | RNA-binding KH domain-containing protein | chr5:2967170-2969655 FORWARD LENGTH=612)

HSP 1 Score: 90.5077 bits (223), Expect = 1.099e-18
Identity = 61/204 (29.90%), Postives = 98/204 (48.04%), Query Frame = 3

Query:   42 PNPSFKRTYSHVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAP-PDSPERVIVVI--------VKL-------------DGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLPVFSKPSDEIIEIQGN-XXXXXXXXXXXXXRLQECPP 584
            P P       +V FR+LC+ S+ G +IGK G ++K L + T + I ++  P  DSP R+I +         VKL             + +   +VS+   AL++VFE +           D     VSC LL  G    +VIGK G+++++I  +TGC +++ +  L + + P D +++I+GN              RLQ CPP
Sbjct:   19 PQPPSAPPPEYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSVSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEAL--------NFGDCTSSTVSCNLLMEGSHVVTVIGKNGELMQRILEETGCNVQLRSHDLSICTNPGDVVLKIEGNRLSAVMKALVSISSRLQACPP 214

[Close]

BLAST of GR407280 vs. TAIR peptide
Match: AT1G14170.2 (| Symbols: | RNA-binding KH domain-containing protein | chr1:4843463-4845253 REVERSE LENGTH=446)

HSP 1 Score: 83.5741 bits (205), Expect = 1.343e-16
Identity = 57/166 (34.34%), Postives = 89/166 (53.61%), Query Frame = 3

Query:   60 RTYSHVVFRLLCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLD-----GQGVPDVSKPPEALLKVFERVLDVAAAETEGTD----VGDR-VVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVLNDKLP--VFSKPSDEIIEIQG 521
            R     V+R LC   + G+IIGK G + K ++  T + +RI++A P   ERV+ +    +     G     V    +AL KV + V+   A + +GTD    +G++  V+ R+L    Q G VIGKGG+V++ +R DT  +IRV+ D LP    +   DE++ I G
Sbjct:    6 RNIHDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVV-ADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIG 170

HSP 2 Score: 80.1073 bits (196), Expect = 1.485e-15
Identity = 46/146 (31.51%), Postives = 79/146 (54.11%), Query Frame = 3

Query:   90 LCHSSRVGAIIGKSGSVIKSLQQLTGAKIRIDDAPPDSPERVIVVIVKLDGQGVPDVSKPPEALLKVFERVLDVAAAETEGTDVGDRVVSCRLLANGGQAGSVIGKGGKVVEKIRIDTGCRIRVL-NDKLPVFSKPSDEIIEIQGN 524
            +C +  VG +IGK G  I  ++Q TGA IR++ +  D  + +I +  K   +   D S    A +++ +R      +E  G D  D  +S RLL +  Q G +IGKGG V+ ++R  T   IR+L  + +P  ++  +E+++I G+
Sbjct:  241 ICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSK---EFYEDQSPAVNAAIRLQQR-----CSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGS 378

The following BLAST results are available for this feature:

BLAST of GR407280 vs. SwissProt
BLAST of GR407280 vs. TrEMBL
BLAST of GR407280 vs. TAIR peptide

BLAST of GR407280 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
PCBP3_HUMAN	6.672e-15	26.77	Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP...	[more]
PCBP3_MOUSE	2.535e-14	27.56	Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp...	[more]
PCBP2_MOUSE	2.535e-14	32.86	Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp...	[more]
PCBP2_HUMAN	2.535e-14	32.86	Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP...	[more]
PCBP1_RABIT	1.258e-13	32.86	Poly(rC)-binding protein 1 OS=Oryctolagus cuniculu...	[more]
PCBP1_MOUSE	1.258e-13	32.86	Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp...	[more]
PCBP1_HUMAN	1.258e-13	32.86	Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP...	[more]
PCBP1_BOVIN	1.258e-13	32.86	Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 ...	[more]
Y4837_ARATH	8.155e-13	31.28	KH domain-containing protein At4g18375 OS=Arabidop...	[more]
IF2B3_MOUSE	4.189e-9	27.71	Insulin-like growth factor 2 mRNA-binding protein ...	[more]

BLAST of GR407280 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9IJ63_POPTR	6.343e-48	44.44	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S9M0_RICCO	5.370e-47	48.67	Poly(RC)-binding protein, putative OS=Ricinus comm...	[more]
B9HEA8_POPTR	1.323e-45	43.68	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A2Q1N8_MEDTR	2.581e-41	58.75	KH, type 1 OS=Medicago truncatula GN=MtrDRAFT_AC14...	[more]
D7MRA9_ARALY	8.892e-34	37.35	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
A5AKJ3_VITVI	1.981e-33	48.85	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q9FMF0_ARATH	1.677e-32	40.39	Similarity to RNA-binding protein OS=Arabidopsis t...	[more]
Q84ZX0_ARATH	1.677e-32	40.39	HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=2 SV=1	[more]
Q84ZW9_ARATH	1.677e-32	40.39	HEN4 isoform 2 OS=Arabidopsis thaliana GN=HEN4 PE=...	[more]
A9RYT2_PHYPA	5.225e-26	39.89	Predicted protein (Fragment) OS=Physcomitrella pat...	[more]

BLAST of GR407280 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G64390.3	1.094e-34	40.39	\| Symbols: HEN4 \| RNA-binding KH domain-containing...	[more]
AT5G64390.1	1.094e-34	40.39	\| Symbols: HEN4 \| RNA-binding KH domain-containing...	[more]
AT5G64390.2	1.094e-34	40.39	\| Symbols: HEN4 \| RNA-binding KH domain-containing...	[more]
AT1G51580.1	1.134e-23	35.10	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]
AT5G15270.1	1.935e-23	32.62	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]
AT5G15270.2	1.935e-23	32.62	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]
AT5G53060.1	1.638e-22	32.08	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]
AT3G04610.1	8.987e-21	39.74	\| Symbols: FLK \| RNA-binding KH domain-containing ...	[more]
AT5G09560.1	1.099e-18	29.90	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]
AT1G14170.2	1.343e-16	34.34	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 70..79 score: NAcoord: 100..115 score
None	No IPR available	SEG	seg	seg	coord: 7..23 score: NAcoord: 40..48 score
None	No IPR available	GENE3D	3.30.1370.10	no description	coord: 23..73 score: 2.3e-12coord: 114..189 score: 1.8
None	No IPR available	PANTHER	PTHR10288	RNA-BINDING PROTEIN RELATED	coord: 32..192 score: 2.7
None	No IPR available	PANTHER	PTHR10288:SF55	RNA-BINDING PROTEIN RELATED	coord: 32..192 score: 2.7
None	No IPR available	SEG	seg	seg	coord: 173..185 score
None	No IPR available	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 9..73 score: 3.8e-15coord: 102..189 score: 8.4
None	No IPR available	SEG	seg	seg	coord: 4..15 score
None	No IPR available	SEG	seg	seg	coord: 13..26 score
None	No IPR available	SEG	seg	seg	coord: 5..15 score: NAcoord: 43..48 score
IPR004087	K Homology	SMART	SM00322	no description	coord: 21..103 score: 4.9e-10coord: 114..188 score: 2.3
IPR004088	K Homology, type 1	PROFILE	PS50084	KH_TYPE_1	coord: 22..92 score: 12.244coord: 115..183 score: 13
IPR018111	K Homology, type 1, subgroup	PFAM	PF00013	KH_1	coord: 25..72 score: 6.1e-12coord: 118..180 score: 8.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR407280 ID=GR407280; Name=GR407280; organism=Cicer arietinum; type=EST; length=771bp
GATCATAGAAGAAGTGGACTATGGGAAGCAACACTGAAGACCCTAATCCC
TCCTTCAAGCGCACTTACAGCCACGTCGTTTTCCGTCTTCTCTGCCACTC
CTCCCGCGTCGGCGCTATCATCGGAAAATCTGGCTCCGTCATCAAGTCAC
TTCAGCAACTCACCGGCGCCAAAATCAGAATCGACGACGCACCGCCTGAC
TCTCCAGAGCGTGTCATCGTCGTCATCGTCAAGCTCGACGGCCAAGGTGT
ACCAGATGTCTCCAAGCCACCTGAGGCTCTGCTCAAGGTGTTCGAAAGAG
TTCTTGATGTTGCTGCCGCTGAGACTGAAGGAACTGACGTTGGAGATAGG
GTGGTTTCATGCAGACTGCTTGCTAACGGCGGTCAGGCTGGTTCCGTCAT
CGGAAAAGGAGGAAAGGTTGTGGAGAAGATCAGGATTGACACCGGATGTA
GAATTAGGGTTTTGAATGATAAGTTGCCTGTTTTCTCTAAGCCCTCTGAT
GAAATCATTGAGATACAAGGCAATGCATCATCTGTAAAGAAGGCACTCGT
TGCTGTTGCTAGTCGGCTTCAAGAGTGTCCTCCGCCTGACAGAACAAAGA
TGATGGGAACCAGACCTTATGAAGTATTTCAGCATGAAACTTATGCTGTT
CCACACGAGGGTTTAACTGATCTGAATATGGATTACCGTCAGCAGAGGAG
CTCTGCATTACCTACTTCATCCATTGGGTCTGATGGCAATCCCTCTAAAG
TTCATCCATTTTCAGCTGAAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR004087	KH_dom
IPR004088	KH_dom_type_1
IPR018111	K Homology, type 1, subgroup

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