GR407990

EST Overview


Name	GR407990
Unique Name	GR407990
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	407

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR407990 vs. SwissProt
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 4.021e-44
Identity = 83/113 (73.45%), Postives = 97/113 (85.84%), Query Frame = -1

Query:    9 QFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 347
            QF  TSLYVGDLD NVT+SQL+D F Q+G VV+VRVCRDL  RRS GYGYVN++NPQDAARA+  LN+ PL  +PIR+MYS RDPS+R+SG GNIFIKNLD++IDHKALHDTF
Sbjct:   32 QFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144

HSP 2 Score: 56.6102 bits (135), Expect = 4.644e-8
Identity = 31/112 (27.68%), Postives = 63/112 (56.25%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            ++++ +LD ++ +  L+D F+  G +VS +V  D +  +S GYG+V Y+N + A +A++ LN   L ++ + +        RD +  K+   N+++KNL ++     L + F
Sbjct:  125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSS-GQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAF 235

HSP 3 Score: 52.7582 bits (125), Expect = 6.705e-7
Identity = 35/125 (28.00%), Postives = 62/125 (49.60%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINR---------------PIRIMYSPR-DPSIRKSGQGNIFIKNLDKAIDHKALHDTF 335
            T++YV +L  + T+  L + F + G++ S  V +D    +S G+G+VN+ N  DAARA++ LN     ++                +R+ Y      +  K    N+++KNLD +I  + L + F
Sbjct:  215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIF 338

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BLAST of GR407990 vs. SwissProt
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.636e-37
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = -1

Query:    9 NQFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 350
            NQ    SLYVG+LDP+VT + LY+LF+ +GQV S+RVCRD   RRS GY YVNY+N  D  RAL+ LN+T +  +P RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   49 NQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTF 162

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BLAST of GR407990 vs. SwissProt
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.636e-37
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = -1

Query:    9 NQFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 350
            NQ    SLYVG+LDP+VT + LY+LF+ +GQV S+RVCRD   RRS GY YVNY+N  D  RAL+ LN+T +  +P RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   46 NQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTF 159

HSP 2 Score: 54.6842 bits (130), Expect = 1.765e-7
Identity = 32/125 (25.60%), Postives = 63/125 (50.40%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQG------------NIFIKNLDKAIDHKALHDTF 335
            T++Y+ ++DP+VT  +   +F Q G++ S  + RD    +S G+G+VNYS  + A  A+D ++   +  + + +        R+  +RK  +             N+++KNL   +D + L + F
Sbjct:  232 TNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRD-PEGKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELF 355

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BLAST of GR407990 vs. SwissProt
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.137e-37
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = -1

Query:    9 NQFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 350
            NQ    SLYVG+LDP+VT + LY+LF+ +GQV S+RVCRD   RRS GY YVNY+N  D  RAL+ LN+T +  +P RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   47 NQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160

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BLAST of GR407990 vs. SwissProt
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.645e-37
Identity = 70/108 (64.81%), Postives = 88/108 (81.48%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            SLYVG+LDP+VT + LY+LF+ +GQV S+RVCRD   RRS GY YVNY+N  D  RAL+ LN+T +  +P RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTF 157

HSP 2 Score: 52.7582 bits (125), Expect = 6.705e-7
Identity = 31/125 (24.80%), Postives = 63/125 (50.40%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQG------------NIFIKNLDKAIDHKALHDTF 335
            T++Y+ ++D +VT  +  +LF + G++ S  + RD    +S G+G+VN+S  + A  A+D +N   +  + + +        R+  +RK  +             N+++KNL   +D + L + F
Sbjct:  230 TNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELF 353

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BLAST of GR407990 vs. SwissProt
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.761e-37
Identity = 70/108 (64.81%), Postives = 88/108 (81.48%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            SLYVG+LDP+VT + LY+LF+ +GQV S+RVCRD   RRS GY YVNY+N  D  RAL+ LN+T +  +P RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   49 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 156

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BLAST of GR407990 vs. SwissProt
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.761e-37
Identity = 70/108 (64.81%), Postives = 88/108 (81.48%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            SLYVG+LDP+VT + LY+LF+ +GQV S+RVCRD   RRS GY YVNY+N  D  RAL+ LN+T +  +P RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160

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BLAST of GR407990 vs. SwissProt
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.218e-37
Identity = 70/108 (64.81%), Postives = 88/108 (81.48%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            SLYVG+LDP+VT + L++LF+ +GQV S+RVCRD   RRS GY YVNY+N  D  RAL+ LN+T +  RP RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163

HSP 2 Score: 58.9214 bits (141), Expect = 9.357e-9
Identity = 34/125 (27.20%), Postives = 63/125 (50.40%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQG------------NIFIKNLDKAIDHKALHDTF 335
            T++YV ++D + T  +  DLF + G++ S  + RD    +S G+G+VN+++  +AA A++ LN      + + +        R+  +RK  +             N++IKNL   ID + L + F
Sbjct:  236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELF 360

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BLAST of GR407990 vs. SwissProt
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 2.363e-36
Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            SLYVG+LDP+VT + LY+LF+ +GQV S+RVCRD   RRS GY YVNY++     RALD LN+T +  +P RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTF 150

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BLAST of GR407990 vs. SwissProt
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 3.086e-36
Identity = 67/108 (62.04%), Postives = 89/108 (82.41%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            SLYVG+LDP+VT + L++LF+ +GQV S+RVCRD   RRS GY YVNY++ +D  +AL+ LN+T +  +P RIM+S RDP++RK+GQGN+FIKNLD AID+KALHDTF
Sbjct:   49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTF 156

HSP 2 Score: 53.5286 bits (127), Expect = 3.931e-7
Identity = 36/125 (28.80%), Postives = 62/125 (49.60%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQG------------NIFIKNLDKAIDHKALHDTF 335
            T++YV ++D +VT+    +LF + G + S  + RD    +S G+G+VNY   + AA A+D LN      + + +        R+  +RK  +             N++IKNL+  +D + L D F
Sbjct:  229 TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARD-DQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMF 352

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BLAST of GR407990 vs. TrEMBL
Match: B9GNU4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816470 PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.065e-50
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = -1

Query:    9 QFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 347
            QFV TSLYVGDLD NVT+SQLYDLFNQVGQVVSVRVCRDL+ RRS GYGYVNYSNPQDAARALDVLNFTPL N+P+RIMYS RDPSIRKSG  NIFIKNLDK IDHKALHDTF
Sbjct:   27 QFVPTSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKPLRIMYSHRDPSIRKSGMANIFIKNLDKTIDHKALHDTF 139

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BLAST of GR407990 vs. TrEMBL
Match: B9MVU0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_287102 PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.391e-50
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = -1

Query:    9 QFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 347
            QFV TSLYVGDLD NVT+SQLYD+FNQVGQVVSVRVCRDL+ RRS GYGYVNYSNPQDAARALDVLNFTPL N+PIRIMYS RDPSIRKSG  NIFIKNLDK IDHKALHDTF
Sbjct:    8 QFVPTSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKPIRIMYSHRDPSIRKSGMANIFIKNLDKGIDHKALHDTF 120

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BLAST of GR407990 vs. TrEMBL
Match: Q9M549_CUCSA (Poly(A)-binding protein OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.816e-50
Identity = 99/114 (86.84%), Postives = 103/114 (90.35%), Query Frame = -1

Query:    9 NQFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 350
            NQ V TSLYVGDLD NVT+SQLYDLFNQVGQVVSVRVCRDLT RRS GYGYVNYSNP DA+RALDVLNFTPL   PIR+MYS RDPS+RKSG GNIFIKNLDKAIDHKALHDTF
Sbjct:   24 NQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTF 137

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BLAST of GR407990 vs. TrEMBL
Match: B9HS30_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557410 PE=4 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 9.014e-50
Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = -1

Query:    9 FVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 344
            FV TSLYVGDL+ NVT+SQLYDLFNQVGQVVSVRVCRDLT RRS GYGYVNYSNPQDAARAL+VLNFTP+   PIR+MYS RDPS+RKSG GNIFIKNLDKAIDHKALHDTF
Sbjct:   22 FVTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALEVLNFTPVNGSPIRVMYSHRDPSVRKSGAGNIFIKNLDKAIDHKALHDTF 133

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BLAST of GR407990 vs. TrEMBL
Match: Q9M6E6_TOBAC (Poly(A)-binding protein OS=Nicotiana tabacum GN=PABP PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.425e-49
Identity = 98/114 (85.96%), Postives = 105/114 (92.11%), Query Frame = -1

Query:    9 NQFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 350
            NQFV TSLYVGDLD NVT+SQLYDLFNQ+GQVVSVRVCRDLT +RS GYGYVNY NPQDAARAL+VLNFTPL  +PIRIMYS RDP+IR+SG GNIFIKNLDKAIDHKALHDTF
Sbjct:   23 NQFV-TSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTF 135

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BLAST of GR407990 vs. TrEMBL
Match: A5BR81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004873 PE=4 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.473e-49
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = -1

Query:    9 NQFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 350
            NQFV TSLYVGDL+ NV +SQLYDLF+Q+G VVSVRVCRDL+ RRS GYGYVNYSNPQDAARALDVLNFTPL  +PIRIMYS RDPSIRKSG GNIFIKNLDK IDHKALHDTF
Sbjct:   25 NQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTF 138

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BLAST of GR407990 vs. TrEMBL
Match: B9R792_RICCO (Polyadenylate-binding protein, putative OS=Ricinus communis GN=RCOM_1589620 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 5.842e-49
Identity = 95/112 (84.82%), Postives = 103/112 (91.96%), Query Frame = -1

Query:    9 FVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 344
            ++ TSLYVGDLD NVT+SQLYD+FNQVGQVVSVRVCRDLT RRS GYGYVNY++PQDAARALD+LNFTP  N+PIRIMYS RDPSIRKSG GNIFIKNLDK IDHKALHDTF
Sbjct:   34 YMPTSLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDILNFTPFNNKPIRIMYSHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTF 145

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BLAST of GR407990 vs. TrEMBL
Match: B9GHB4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_815675 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 5.842e-49
Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = -1

Query:    9 FVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 344
            FV TSLYVGDL+ +VT+SQLYDLFNQVGQVVSVRVCRDLT RRS GYGYVNYSNPQDAARAL++LNFTPL   PIR+MYS RDP+IRKSG GNIFIKNLDKAIDHKALHDTF
Sbjct:   22 FVTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALEMLNFTPLNGSPIRVMYSHRDPTIRKSGAGNIFIKNLDKAIDHKALHDTF 133

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BLAST of GR407990 vs. TrEMBL
Match: B9RYE9_RICCO (Polyadenylate-binding protein, putative OS=Ricinus communis GN=RCOM_0812530 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.700e-48
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = -1

Query:    9 FVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 344
            +V TSLYVGDL+ NVT+S LYDLFNQVGQVVSVRVCRDLT RRS GYGYVNYS+PQDAARALD+LNFTPL   PIRIMYS RDPS+RKSG GNIFIKNLDK IDHKALHDTF
Sbjct:   21 YVTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALDMLNFTPLNGSPIRIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTF 132

[Close]

BLAST of GR407990 vs. TrEMBL
Match: A5C1F3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011270 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.460e-48
Identity = 95/114 (83.33%), Postives = 101/114 (88.60%), Query Frame = -1

Query:    9 NQFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 350
            NQFV TSLYVGDL+ NV + QLYDLFNQ+G VVSVRVCRDL+ RRS GYGYVNYSNPQDAARALDVLNFTPL  +P+RIMYS  DPSIRKSG GNIFIKNLDK IDHKALHDTF
Sbjct:   25 NQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPLRIMYSHCDPSIRKSGTGNIFIKNLDKGIDHKALHDTF 138

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT4G34110.1 (| Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629)

HSP 1 Score: 176.407 bits (446), Expect = 4.560e-45
Identity = 83/113 (73.45%), Postives = 97/113 (85.84%), Query Frame = -1

Query:    9 QFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 347
            QF  TSLYVGDLD NVT+SQL+D F Q+G VV+VRVCRDL  RRS GYGYVN++NPQDAARA+  LN+ PL  +PIR+MYS RDPS+R+SG GNIFIKNLD++IDHKALHDTF
Sbjct:   32 QFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144

HSP 2 Score: 56.6102 bits (135), Expect = 5.266e-9
Identity = 31/112 (27.68%), Postives = 63/112 (56.25%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            ++++ +LD ++ +  L+D F+  G +VS +V  D +  +S GYG+V Y+N + A +A++ LN   L ++ + +        RD +  K+   N+++KNL ++     L + F
Sbjct:  125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSS-GQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAF 235

HSP 3 Score: 52.7582 bits (125), Expect = 7.605e-8
Identity = 35/125 (28.00%), Postives = 62/125 (49.60%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINR---------------PIRIMYSPR-DPSIRKSGQGNIFIKNLDKAIDHKALHDTF 335
            T++YV +L  + T+  L + F + G++ S  V +D    +S G+G+VN+ N  DAARA++ LN     ++                +R+ Y      +  K    N+++KNLD +I  + L + F
Sbjct:  215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIF 338

HSP 4 Score: 50.447 bits (119), Expect = 3.774e-7
Identity = 28/95 (29.47%), Postives = 56/95 (58.95%), Query Frame = -1

Query:   72 NQFVRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPR--DPSIRKSGQ 350
            ++F  ++LYV +LDP++++ +L ++F+  G V S +V RD     S G G+V ++ P++A  A+  L+   + ++P+ +  + R  D  +R   Q
Sbjct:  313 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPN-GTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQ 406

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT1G49760.2 (| Symbols: PAB8 | poly(A) binding protein 8 | chr1:18416740-18419753 FORWARD LENGTH=671)

HSP 1 Score: 169.859 bits (429), Expect = 4.268e-43
Identity = 82/109 (75.23%), Postives = 93/109 (85.32%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 335
            TSLYVGDLD  VT+SQL++ F Q GQVVSVRVCRD+T RRS GYGYVNY+ PQDA+RAL+ LNF  L  R IR+MYS RDPS+RKSG GNIFIKNLDK+IDHKALH+TF
Sbjct:   45 TSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETF 153

HSP 2 Score: 53.5286 bits (127), Expect = 4.458e-8
Identity = 31/112 (27.68%), Postives = 62/112 (55.36%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            ++++ +LD ++ +  L++ F+  G ++S +V  D +  +S GYG+V Y   + A  A+D LN   L ++ + +        RDPS  K    N+++KNL +++  + L+  F
Sbjct:  134 NIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPS-GQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVF 244

HSP 3 Score: 53.1434 bits (126), Expect = 5.823e-8
Identity = 35/125 (28.00%), Postives = 64/125 (51.20%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIR------------KSGQGNIFIKNLDKAIDHKALHDTF 335
            T++YV +L  ++++ +L  +F + G   S  + RD    +S G+G+VN+ N  DAARA+D LN     ++   +      S R+  ++            KS   N+++KNLD+++    L + F
Sbjct:  224 TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGE-GKSKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHF 347

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT1G49760.1 (| Symbols: PAB8, PABP8 | poly(A) binding protein 8 | chr1:18416740-18419753 FORWARD LENGTH=671)

HSP 1 Score: 169.859 bits (429), Expect = 4.268e-43
Identity = 82/109 (75.23%), Postives = 93/109 (85.32%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 335
            TSLYVGDLD  VT+SQL++ F Q GQVVSVRVCRD+T RRS GYGYVNY+ PQDA+RAL+ LNF  L  R IR+MYS RDPS+RKSG GNIFIKNLDK+IDHKALH+TF
Sbjct:   45 TSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETF 153

HSP 2 Score: 53.5286 bits (127), Expect = 4.458e-8
Identity = 31/112 (27.68%), Postives = 62/112 (55.36%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            ++++ +LD ++ +  L++ F+  G ++S +V  D +  +S GYG+V Y   + A  A+D LN   L ++ + +        RDPS  K    N+++KNL +++  + L+  F
Sbjct:  134 NIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPS-GQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVF 244

HSP 3 Score: 53.1434 bits (126), Expect = 5.823e-8
Identity = 35/125 (28.00%), Postives = 64/125 (51.20%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIR------------KSGQGNIFIKNLDKAIDHKALHDTF 335
            T++YV +L  ++++ +L  +F + G   S  + RD    +S G+G+VN+ N  DAARA+D LN     ++   +      S R+  ++            KS   N+++KNLD+++    L + F
Sbjct:  224 TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGE-GKSKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHF 347

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT1G22760.1 (| Symbols: PAB3 | poly(A) binding protein 3 | chr1:8055599-8058799 FORWARD LENGTH=660)

HSP 1 Score: 149.443 bits (376), Expect = 5.970e-37
Identity = 73/109 (66.97%), Postives = 86/109 (78.90%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 335
            +SLY GDLDP VT + L+DLF  V  VVSVRVCRD   RRS GY Y+N+SNP DA RA++ LN+TPL +RPIRIM S RDPS R SG+GNIFIKNLD +ID+KAL +TF
Sbjct:   49 SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQN-RRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETF 156

HSP 2 Score: 57.7658 bits (138), Expect = 2.364e-9
Identity = 34/114 (29.82%), Postives = 58/114 (50.88%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPL------INRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            ++++ +LD ++ N  L++ F+  G ++S +V  D+T  RS GYG+V +   + A  A+D LN   +      +   IR     RD +       N+++KNL K I    L  TF
Sbjct:  137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVT-GRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTF 249

HSP 3 Score: 49.6766 bits (117), Expect = 6.438e-7
Identity = 27/78 (34.62%), Postives = 48/78 (61.54%), Query Frame = -1

Query:   99 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPR 332
            +LY+ +LD +V + +L ++F++ G V S +V  +     S G+G+V YSNP++A RAL  +N   +  +P+ I  + R
Sbjct:  333 NLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQR 409

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT1G71770.2 (| Symbols: PAB5 | poly(A)-binding protein 5 | chr1:26990777-26993489 REVERSE LENGTH=682)

HSP 1 Score: 147.517 bits (371), Expect = 2.269e-36
Identity = 71/109 (65.14%), Postives = 90/109 (82.57%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 335
            +SLYVGDLDP+V  S L DLFNQV  V ++RVCRDLT  RS GY YVN++NP+DA+RA++ LN+ P+ +RPIRIM S RDPS R SG+GN+FIKNLD +ID+KAL++TF
Sbjct:   59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLT-HRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETF 166

HSP 2 Score: 58.5362 bits (140), Expect = 1.386e-9
Identity = 34/114 (29.82%), Postives = 60/114 (52.63%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQG------NIFIKNLDKAIDHKALHDTF 332
            ++++ +LD ++ N  LY+ F+  G ++S +V  D+   RS GYG+V +   + A  A+D LN   L ++ + + +  R     +S  G      N+++KNL K I    L  TF
Sbjct:  147 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVV-GRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTF 259

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT1G71770.1 (| Symbols: PAB5 | poly(A)-binding protein 5 | chr1:26990777-26993489 REVERSE LENGTH=682)

HSP 1 Score: 147.517 bits (371), Expect = 2.269e-36
Identity = 71/109 (65.14%), Postives = 90/109 (82.57%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 335
            +SLYVGDLDP+V  S L DLFNQV  V ++RVCRDLT  RS GY YVN++NP+DA+RA++ LN+ P+ +RPIRIM S RDPS R SG+GN+FIKNLD +ID+KAL++TF
Sbjct:   59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLT-HRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETF 166

HSP 2 Score: 58.5362 bits (140), Expect = 1.386e-9
Identity = 34/114 (29.82%), Postives = 60/114 (52.63%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQG------NIFIKNLDKAIDHKALHDTF 332
            ++++ +LD ++ N  LY+ F+  G ++S +V  D+   RS GYG+V +   + A  A+D LN   L ++ + + +  R     +S  G      N+++KNL K I    L  TF
Sbjct:  147 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVV-GRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTF 259

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT2G23350.1 (| Symbols: PAB4, PABP4 | poly(A) binding protein 4 | chr2:9943209-9946041 FORWARD LENGTH=662)

HSP 1 Score: 139.813 bits (351), Expect = 4.730e-34
Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            SLYVGDLD NVT+SQLYD F +V QVVSVRVCRD     S GYGYVNYSN  DA +A+  LN++ L  + IRI YS RD S R+SG GN+F+KNLDK++D+K LH+ F
Sbjct:   47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAF 154

HSP 2 Score: 52.7582 bits (125), Expect = 7.605e-8
Identity = 34/112 (30.36%), Postives = 57/112 (50.89%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            +L+V +LD +V N  L++ F+  G +VS +V  D    +S GYG+V +     A  A++ LN   L ++ I +        R+ +  K    N+++KNL +A     L  TF
Sbjct:  135 NLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATD-HMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTF 245

HSP 3 Score: 52.373 bits (124), Expect = 9.932e-8
Identity = 38/125 (30.40%), Postives = 63/125 (50.40%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSI-RKSGQG-----------NIFIKNLDKAIDHKALHDTF 335
            T++YV +L    T+ +L   F Q G + S  V RD    +S  +G+VN+ NP+DAARA++ LN     ++   +      S R+  + R+  QG           N+++KNLD  +  + L + F
Sbjct:  225 TNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGD-GKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELF 348

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT2G36660.1 (| Symbols: PAB7 | poly(A) binding protein 7 | chr2:15361476-15364398 REVERSE LENGTH=609)

HSP 1 Score: 99.3673 bits (246), Expect = 7.085e-22
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = -1

Query:    9 VRTSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 341
            V  SLYVGDL P+VT   LYD F +   + SVR+C+D +  RS  YGY N+ + QDA  A++  N + L  + IR+M+S R P  R++G GN+F+KNL +++ +  L D F
Sbjct:   22 VTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMF 132

HSP 2 Score: 54.299 bits (129), Expect = 2.614e-8
Identity = 34/125 (27.20%), Postives = 66/125 (52.80%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI----MYSPRDPSIRKSGQ------------GNIFIKNLDKAIDHKALHDTF 335
            T+LY+ +LD +V+   L + F + G++VS+ + +D   R   GY +VN+ NP+DA RA + +N T   ++ + +      + R+  +R+  +             NI++KN++ A+  + L   F
Sbjct:  201 TNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDEN-RLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHF 324

HSP 3 Score: 51.2174 bits (121), Expect = 2.213e-7
Identity = 32/110 (29.09%), Postives = 56/110 (50.91%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRI--MYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            +++V +L  +VTN+ L D+F + G +VS +V   L   +S GYG+V +     A  A+  LN T + ++ I +       D    +    N+++KNLD  +    L + F
Sbjct:  113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKF 221

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT3G16380.1 (| Symbols: PAB6 | poly(A) binding protein 6 | chr3:5558676-5560993 REVERSE LENGTH=537)

HSP 1 Score: 83.5741 bits (205), Expect = 4.023e-17
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIR---KSGQGNIFIKNLDKAIDHKALHDTF 332
            SLYVGDL P+VT   L D F+    VVSV +CR+    +S  Y Y+N+ +P  A+ A+  LN + L  + +RIM+S RD + R   ++G  N+++KNLD +I    L   F
Sbjct:   22 SLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTRLNHSDLKGKAMRIMWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMF 132

HSP 2 Score: 53.5286 bits (127), Expect = 4.458e-8
Identity = 40/124 (32.26%), Postives = 66/124 (53.23%), Query Frame = -1

Query:    9 TSLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPI-----------RIMYSPR--DPSIRKSGQ--GNIFIKNLDKAIDHKALHDTF 335
            T++YV +L   VT+  L+ LF+Q G V SV V RD    RS G+G+VN+ NP++A +A++ L    L ++ +           R M   +  D  I K      N+++KNL ++++   L + F
Sbjct:  202 TNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRD-GMGRSRGFGFVNFCNPENAKKAMESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWSNLYVKNLSESMNETRLREIF 324

[Close]

BLAST of GR407990 vs. TAIR peptide
Match: AT2G18510.1 (| Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:8031554-8033517 REVERSE LENGTH=363)

HSP 1 Score: 77.0258 bits (188), Expect = 3.765e-15
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = -1

Query:    9 SLYVGDLDPNVTNSQLYDLFNQVGQVVSVRVCRDLTFRRSFGYGYVNYSNPQDAARALDVLNFTPLINRPIRIMYSPRDPSIRKSGQGNIFIKNLDKAIDHKALHDTF 332
            ++YVG LD  ++   L++LF Q G VV+V V +D        YG++ Y + +DA  A+ VLN   L  +PIR+  + +D      G  N+FI NLD  +D K L+DTF
Sbjct:   26 TVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTF 132

The following BLAST results are available for this feature:

BLAST of GR407990 vs. SwissProt
BLAST of GR407990 vs. TrEMBL
BLAST of GR407990 vs. TAIR peptide

BLAST of GR407990 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
PABP2_ARATH	4.021e-44	73.45	Polyadenylate-binding protein 2 OS=Arabidopsis tha...	[more]
PABP_ASPNC	1.636e-37	63.16	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_ASPCL	1.636e-37	63.16	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_NEOFI	2.137e-37	63.16	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_ASPOR	3.645e-37	64.81	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_ASPTN	4.761e-37	64.81	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_ASPFU	4.761e-37	64.81	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_COCIM	6.218e-37	64.81	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_EMENI	2.363e-36	63.89	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_PHANO	3.086e-36	62.04	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]

BLAST of GR407990 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9GNU4_POPTR	1.065e-50	88.50	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9MVU0_POPTR	1.391e-50	88.50	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
Q9M549_CUCSA	1.816e-50	86.84	Poly(A)-binding protein OS=Cucumis sativus PE=2 SV...	[more]
B9HS30_POPTR	9.014e-50	86.61	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9M6E6_TOBAC	3.425e-49	85.96	Poly(A)-binding protein OS=Nicotiana tabacum GN=PA...	[more]
A5BR81_VITVI	4.473e-49	85.09	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9R792_RICCO	5.842e-49	84.82	Polyadenylate-binding protein, putative OS=Ricinus...	[more]
B9GHB4_POPTR	5.842e-49	85.71	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RYE9_RICCO	1.700e-48	84.82	Polyadenylate-binding protein, putative OS=Ricinus...	[more]
A5C1F3_VITVI	6.460e-48	83.33	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of GR407990 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G34110.1	4.560e-45	73.45	\| Symbols: PAB2, PABP2, ATPAB2 \| poly(A) binding p...	[more]
AT1G49760.2	4.268e-43	75.23	\| Symbols: PAB8 \| poly(A) binding protein 8 \| chr1...	[more]
AT1G49760.1	4.268e-43	75.23	\| Symbols: PAB8, PABP8 \| poly(A) binding protein 8...	[more]
AT1G22760.1	5.970e-37	66.97	\| Symbols: PAB3 \| poly(A) binding protein 3 \| chr1...	[more]
AT1G71770.2	2.269e-36	65.14	\| Symbols: PAB5 \| poly(A)-binding protein 5 \| chr1...	[more]
AT1G71770.1	2.269e-36	65.14	\| Symbols: PAB5 \| poly(A)-binding protein 5 \| chr1...	[more]
AT2G23350.1	4.730e-34	62.96	\| Symbols: PAB4, PABP4 \| poly(A) binding protein 4...	[more]
AT2G36660.1	7.085e-22	44.14	\| Symbols: PAB7 \| poly(A) binding protein 7 \| chr2...	[more]
AT3G16380.1	4.023e-17	40.54	\| Symbols: PAB6 \| poly(A) binding protein 6 \| chr3...	[more]
AT2G18510.1	3.765e-15	38.89	\| Symbols: emb2444 \| RNA-binding (RRM/RBD/RNP moti...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 46..58 score
None	No IPR available	PANTHER	PTHR10432	RNA-BINDING PROTEIN	coord: 19..133 score: 1
None	No IPR available	PANTHER	PTHR10432:SF69	POLYADENYLATE-BINDING PROTEIN	coord: 19..133 score: 1
None	No IPR available	SEG	seg	seg	coord: 3..19 score
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 24..133 score: 1.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 27..97 score: 4
IPR000504	RNA recognition motif domain	SMART	SM00360	no description	coord: 26..99 score: 9.3
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 25..103 score: 17
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 25..110 score: 1.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR407990 ID=GR407990; Name=GR407990; organism=Cicer arietinum; type=EST; length=407bp
AATGTAAAAAAGGTATCATGTAACGCCTTATGGTCAATTGCCTTGTCCAA
ATTCTTAATAAATATGTTTCCTTGACCACTTTTGCGGATACTGGGATCGC
GGGGTGAATACATAATACGAATGGGCCTGTTGATGAGAGGAGTGAAGTTC
AGAACATCCAATGCTCTGGCAGCATCTTGCGGGTTGCTATAGTTGACATA
ACCATAACCGAATGACCTCCTAAAGGTCAAGTCCCTGCAAACCCTAACAG
AAACAACCTGACCCACTTGGTTGAACAAGTCATACAGTTGCGAATTTGTG
ACATTCGGATCGAGATCCCCGACATAAAGCGACGTCCTCACGAATTGGTT
TCCACCGGCACCAGCAGCCGCCGCCGCTGCGGCCGCAGCAACAGCCCCAC
CGTTGGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

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