GR421020

EST Overview
NameGR421020
Unique NameGR421020
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length608
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR421020 vs. TrEMBL
Match: B7FGR3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.163e-26
Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = -1
Query:  264 LLESSHAKATLTCIFFDQTT---TPCIPYAVLGGSVSPLCCQGVYFINAAYKNGDEPLHLEELHQDTAAKIPLINYTRVNQIGELCSL*SLPGFKC-FKV 551
            ++ SSHAKATLTC   +QTT   TPCIPY +LGGSVSPLCCQG++ INAAYKNGD+        QDTAAKIPLI+YTR+NQIGELC      G KC FKV
Sbjct:   14 MIASSHAKATLTC---EQTTIYLTPCIPYGMLGGSVSPLCCQGIHSINAAYKNGDDRRVACHCIQDTAAKIPLIDYTRINQIGELC------GSKCPFKV 104          
BLAST of GR421020 vs. TrEMBL
Match: Q9M7D7_PEA (Lipid transfer protein OS=Pisum sativum GN=LTP PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.027e-22
Identity = 58/97 (59.79%), Postives = 66/97 (68.04%), Query Frame = -1
Query:  264 LLESSHAKATLTCIFFDQTTTPCIPYAVLGGSVSPLCCQGVYFINAAYKNGDEPLHLEELHQDTAAKIPLINYTRVNQIGELCSL*SLPGFKC-FKV 551
            L+ SS+ KATLTC       TPCIPY  LGGSV PLCCQGV+ +NAAYKNGD+        QD AA IPLI+YTR+NQIG+LC      G KC FKV
Sbjct:   15 LISSSYGKATLTCEQVTIWLTPCIPYGTLGGSVLPLCCQGVHSLNAAYKNGDDRRLACHCVQDRAALIPLIDYTRINQIGDLC------GSKCPFKV 105          
BLAST of GR421020 vs. TrEMBL
Match: D7SJJ0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024563001 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.274e-7
Identity = 33/89 (37.08%), Postives = 46/89 (51.69%), Query Frame = -1
Query:  285 LLESSHAKATLTCIFFDQTTTPCIPYAVLGGSVSPLCCQGVYFINAAYKNGDEPLHLEELHQDTAAKIPLINYTRVNQIGELCSL*SLP 551
            L+ +  A AT+TC    Q   PC+ Y + GG++   CC GV  + AA K G++        QD AA IP I+Y  V  +   C + SLP
Sbjct:   19 LVTAPQADATVTCSQVTQLLNPCVNYLIYGGAIPSSCCAGVKQVKAASKTGEDRRTACSCIQDGAAMIPGIDYNLVASLPSQCGV-SLP 106          
The following BLAST results are available for this feature:
BLAST of GR421020 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
B7FGR3_MEDTR9.163e-2666.00Putative uncharacterized protein OS=Medicago trunc... [more]
Q9M7D7_PEA8.027e-2259.79Lipid transfer protein OS=Pisum sativum GN=LTP PE=... [more]
D7SJJ0_VITVI3.274e-737.08Whole genome shotgun sequence of line PN40024, sca... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013770Plant lipid transfer protein/hydrophobic protein, helical domainGENE3D1.10.110.10no descriptioncoord: 11..84
score: 1.9
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storageSUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 11..85
score: 1.7

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR421020 ID=GR421020; Name=GR421020; organism=Cicer arietinum; type=EST; length=608bp
CTTTTTTTTAAAGGAATATTTTTCAGGAAATTAAAATATTAATTATTGAT
GAAAGATGATAAACATGTTACATAAAATTGTTCACATCGGATCGTAACTA
TCCGTACACTTTATTTTCTATAACAATTATTTTTTGGTACGGCTTATATG
TATCAATCGCCACAGCACAAGGCTTATATTTCTTTATTCCCTACTAGTAT
ACAATAATCTTTGGTAGTCACAAATGTTGCACCCTTAATCGCTGCTTACT
TCAATTAGTGTTACACCTTAAAGCATTTAAATCCGGGTAAACTTTATAGG
GAACATAGCTCACCAATTTGATTAACACGTGTATAGTTAATCAAAGGGAT
TTTGGCAGCCGTATCCTGATGCAACTCTTCTAAATGCAGTGGCTCATCAC
CATTCTTATAAGCAGCATTTATAAAGTAAACACCTTGGCAACATAAGGGT
GATACACTCCCTCCTAATACTGCATAGGGTATGCATGGAGTCGTTGTTTG
ATCAAAAAATATGCATGTTAAGGTTGCTTTAGCATGAGAACTTTCTAGCA
ATCATAACAATTATCAACATGCAAATGCAACTTCCCATTTTTGTTAAATA
TAAAAATT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: INTERPRO
TermDefinition
IPR013770Plant lipid transfer protein/hydrophobic protein helical domain
IPR016140Bifunc_inhib/LTP/seed_store