GR394428

EST Overview


Name	GR394428
Unique Name	GR394428
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	417

Libraries


Library Name	Type
LIBEST_024779 ICC1882 Slow drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_LUMRU (40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 4.226e-62
Identity = 112/134 (83.58%), Postives = 122/134 (91.04%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP G+R  RKLK  RRE RW DK+YKK HLGT +KSNPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVPRDGCLNF++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVASVSLLALY 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_CAEEL (40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 3.028e-60
Identity = 110/134 (82.09%), Postives = 120/134 (89.55%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP G+   RKLKT R+E RW DK YKK H+GT +KSNPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLNFV+ENDEVLV+GFGRSGHAVGDIPGVRFKIVKVA  SL+ALF
Sbjct:    1 MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALF 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_DERVA (40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 6.746e-60
Identity = 107/134 (79.85%), Postives = 122/134 (91.04%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP G+R  RK ++ RR+ RW DK+YKK HLGT +K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVPRDGCLN+++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKPRGLRTARKHRSHRRDQRWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_SPOFR (40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 8.811e-60
Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP GIR  RK    RRE RWADK+YKK H+GT +K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKK+TAFVPRDGCLN ++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_PAPDA (40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 8.811e-60
Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP GIR  RK    RRE RWADK+YKK H+GT +K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKK+TAFVPRDGCLN ++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_PIG (40S ribosomal protein S23 OS=Sus scrofa GN=RPS23 PE=2 SV=3)

HSP 1 Score: 227.639 bits (579), Expect = 1.503e-59
Identity = 107/134 (79.85%), Postives = 122/134 (91.04%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGK  G+R  RKL++ RR+++W DK+YKK HLGTA K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLNF++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKCRGLRTARKLRSHRRDHKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_ICTPU (40S ribosomal protein S23 OS=Ictalurus punctatus GN=rps23 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.503e-59
Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGK  G+R  RKL+  RRE +W DK+YKK HLGTA K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLNF++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKCRGLRTARKLRDHRREQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.503e-59
Identity = 110/134 (82.09%), Postives = 119/134 (88.81%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP GIRA RKLKT R+  RW DK YKK HLGT +K+NPFG ASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLNF++ENDEVLVAGFGR GHAVGDIPGVRFKIVKVA  SL+ALF
Sbjct:    1 MGKPKGIRAARKLKTHRQAQRWNDKGYKKAHLGTRWKANPFGTASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKIVKVANTSLIALF 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_RAT (40S ribosomal protein S23 OS=Rattus norvegicus GN=Rps23 PE=2 SV=3)

HSP 1 Score: 227.254 bits (578), Expect = 1.963e-59
Identity = 107/134 (79.85%), Postives = 121/134 (90.30%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGK  G+R  RKL++ RR+ +W DK+YKK HLGTA K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLNF++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. SwissProt
Match: RS23_MOUSE (40S ribosomal protein S23 OS=Mus musculus GN=Rps23 PE=2 SV=3)

HSP 1 Score: 227.254 bits (578), Expect = 1.963e-59
Identity = 107/134 (79.85%), Postives = 121/134 (90.30%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGK  G+R  RKL++ RR+ +W DK+YKK HLGTA K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLNF++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: B3RI96_TRIAD (40S ribosomal protein S23 OS=Trichoplax adhaerens GN=TRIADDRAFT_63082 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.258e-60
Identity = 110/134 (82.09%), Postives = 124/134 (92.54%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP G+R  RKL++ RR+ RW DK+YKK+HLGTA K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVPRDGCLN+++ENDEVLVAGFGR GHAVGDIPGVRFKIVKVA VSLLAL+
Sbjct:    1 MGKPHGLRTARKLRSHRRDQRWHDKDYKKRHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKIVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: A8UAH0_9BILA (Putative ribosomal protein S23 OS=Barentsia elongata PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.258e-60
Identity = 110/134 (82.09%), Postives = 123/134 (91.79%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP+G+R  RKL+  RR+ RWADK+YKK HLGT +K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLN ++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVAGVSLLALF
Sbjct:    1 MGKPSGLRTARKLRNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVAGVSLLALF 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: A9UDQ2_9BILA (Putative 40S ribosomal protein RPS23 OS=Flustra foliacea PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.617e-59
Identity = 111/134 (82.84%), Postives = 122/134 (91.04%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP GIR  RK +T RR+ +W DK+YKK HLGT +K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLNFV+ENDEVLV+GFGRSGHAVGDIPGVRFKIVKVA VSLLALF
Sbjct:    1 MGKPRGIRTARKQRTHRRDQKWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVASVSLLALF 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: C0H7K2_SALSA (40S ribosomal protein S23 OS=Salmo salar GN=RS23 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.112e-59
Identity = 110/135 (81.48%), Postives = 121/135 (89.63%), Query Frame = 3

Query:   12 NMGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            NMGK  G+R  RKL+  RRE RW DK+YKK HLGTA K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP DGCLNF++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:   57 NMGKCRGLRTARKLRNHRREQRWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 191

[Close]

BLAST of GR394428 vs. TrEMBL
Match: A8UEQ3_AREMA (Ribosomal protein rps23 OS=Arenicola marina PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.112e-59
Identity = 108/134 (80.60%), Postives = 122/134 (91.04%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP G+R  RKL+  RR+ RW DK+YKK HLGT +K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVPRDGCLN+++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKPRGLRTARKLRNHRRDQRWHDKDYKKSHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: A8E6C5_9BILA (Putative 40S ribosomal protein S23 OS=Spadella cephaloptera GN=rps23 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 3.602e-59
Identity = 108/134 (80.60%), Postives = 121/134 (90.30%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP G++  RK++  RR  RWADK+YKK H GTA K+NPFGGASH KGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVP+DGCLNF++ENDEVLVAGFGRSGHAVGDIPGVRFK+VKVA VSLLALF
Sbjct:    1 MGKPRGLKTARKIRNHRRVQRWADKDYKKAHSGTALKANPFGGASHVKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPKDGCLNFIEENDEVLVAGFGRSGHAVGDIPGVRFKVVKVANVSLLALF 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: Q09JF5_ARGMO (40S ribosomal protein S23 OS=Argas monolakensis PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.704e-59
Identity = 109/134 (81.34%), Postives = 121/134 (90.30%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP G+R  RK +  RRE RW DK+YKK HLGT +K+NPFGGASHAKGIVLEK+G+E+KQPNSAIRKCV VQLIKNGKKITAFVPRDGCLNF++ENDEVLVAGFGR GHAVGDIPGVRFK+VKVA VSLLAL+
Sbjct:    1 MGKPRGLRTARKHRDHRREQRWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: B9Q5P6_TOXGO (Ribosomal protein S23, putative OS=Toxoplasma gondii VEG GN=TGVEG_025830 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.704e-59
Identity = 111/134 (82.84%), Postives = 122/134 (91.04%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP GIR  RKL++ RR  +WADK YKK HLGT +K+NPFGG+SHAKGIV+EKLGIE+KQPNSAIRKCV VQLIKNGKKITAFVPRDG LN++DENDEVLVAGFGRSGHAVGDIPGVRFK+VKVAG SLLALF
Sbjct:    1 MGKPNGIRTARKLRSRRRVQKWADKTYKKAHLGTRWKANPFGGSSHAKGIVVEKLGIEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIDENDEVLVAGFGRSGHAVGDIPGVRFKVVKVAGASLLALF 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: B9PHL8_TOXGO (Ribosomal protein S23, putative OS=Toxoplasma gondii GN=TGGT1_118100 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.704e-59
Identity = 111/134 (82.84%), Postives = 122/134 (91.04%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP GIR  RKL++ RR  +WADK YKK HLGT +K+NPFGG+SHAKGIV+EKLGIE+KQPNSAIRKCV VQLIKNGKKITAFVPRDG LN++DENDEVLVAGFGRSGHAVGDIPGVRFK+VKVAG SLLALF
Sbjct:    1 MGKPNGIRTARKLRSRRRVQKWADKTYKKAHLGTRWKANPFGGSSHAKGIVVEKLGIEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIDENDEVLVAGFGRSGHAVGDIPGVRFKVVKVAGASLLALF 134

[Close]

BLAST of GR394428 vs. TrEMBL
Match: B6KJ78_TOXGO (Ribosomal protein S23, putative OS=Toxoplasma gondii ME49 GN=TGME49_029670 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.704e-59
Identity = 111/134 (82.84%), Postives = 122/134 (91.04%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGKP GIR  RKL++ RR  +WADK YKK HLGT +K+NPFGG+SHAKGIV+EKLGIE+KQPNSAIRKCV VQLIKNGKKITAFVPRDG LN++DENDEVLVAGFGRSGHAVGDIPGVRFK+VKVAG SLLALF
Sbjct:    1 MGKPNGIRTARKLRSRRRVQKWADKTYKKAHLGTRWKANPFGGSSHAKGIVVEKLGIEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIDENDEVLVAGFGRSGHAVGDIPGVRFKVVKVAGASLLALF 134

[Close]

BLAST of GR394428 vs. TAIR peptide
Match: AT5G02960.1 (| Symbols: | Ribosomal protein S12/S23 family protein | chr5:693280-694396 REVERSE LENGTH=142)

HSP 1 Score: 211.846 bits (538), Expect = 1.019e-55
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGK  G+ AGRKLK  R   RWADK+YKK HLG  +K  PF G+SHAKGIVLEK+GIE+KQPNSAIRKC  VQLIKNGKKI AFVP DGCLN+++ENDEVL+AGFGR GHAVGDIPGVRFK+VKV+GVSLLALF
Sbjct:    1 MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 133

[Close]

BLAST of GR394428 vs. TAIR peptide
Match: AT3G09680.1 (| Symbols: | Ribosomal protein S12/S23 family protein | chr3:2969197-2970291 REVERSE LENGTH=142)

HSP 1 Score: 202.216 bits (513), Expect = 8.073e-53
Identity = 100/134 (74.63%), Postives = 112/134 (83.58%), Query Frame = 3

Query:   15 MGKPAGIRAGRKLKTDRRENRWADKEYKKKHLGTAFKSNPFGGASHAKGIVLEKLGIESKQPNSAIRKCVXVQLIKNGKKITAFVPRDGCLNFVDENDEVLVAGFGRSGHAVGDIPGVRFKIVKVAGVSLLALF 416
            MGK  G+ AGRKLK  R   RWADK YKK + G  +K  PF  +SHAKGIVLEK+GIE+KQPNSAIRKC  VQLIKNGKKI AFVP DGCLN+++ENDEVL+AGFGR GHAVGDIPGVRFK+VKV+GVSLLALF
Sbjct:    1 MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKK-PFACSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 133

The following BLAST results are available for this feature:

BLAST of GR394428 vs. SwissProt
BLAST of GR394428 vs. TrEMBL
BLAST of GR394428 vs. TAIR peptide

BLAST of GR394428 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS23_LUMRU	4.226e-62	83.58	40S ribosomal protein S23 OS=Lumbricus rubellus GN...	[more]
RS23_CAEEL	3.028e-60	82.09	40S ribosomal protein S23 OS=Caenorhabditis elegan...	[more]
RS23_DERVA	6.746e-60	79.85	40S ribosomal protein S23 OS=Dermacentor variabili...	[more]
RS23_SPOFR	8.811e-60	80.60	40S ribosomal protein S23 OS=Spodoptera frugiperda...	[more]
RS23_PAPDA	8.811e-60	80.60	40S ribosomal protein S23 OS=Papilio dardanus GN=R...	[more]
RS23_PIG	1.503e-59	79.85	40S ribosomal protein S23 OS=Sus scrofa GN=RPS23 P...	[more]
RS23_ICTPU	1.503e-59	80.60	40S ribosomal protein S23 OS=Ictalurus punctatus G...	[more]
RS23_BRUMA	1.503e-59	82.09	40S ribosomal protein S23 OS=Brugia malayi GN=rps-...	[more]
RS23_RAT	1.963e-59	79.85	40S ribosomal protein S23 OS=Rattus norvegicus GN=...	[more]
RS23_MOUSE	1.963e-59	79.85	40S ribosomal protein S23 OS=Mus musculus GN=Rps23...	[more]

BLAST of GR394428 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B3RI96_TRIAD	3.258e-60	82.09	40S ribosomal protein S23 OS=Trichoplax adhaerens ...	[more]
A8UAH0_9BILA	3.258e-60	82.09	Putative ribosomal protein S23 OS=Barentsia elonga...	[more]
A9UDQ2_9BILA	1.617e-59	82.84	Putative 40S ribosomal protein RPS23 OS=Flustra fo...	[more]
C0H7K2_SALSA	2.112e-59	81.48	40S ribosomal protein S23 OS=Salmo salar GN=RS23 P...	[more]
A8UEQ3_AREMA	2.112e-59	80.60	Ribosomal protein rps23 OS=Arenicola marina PE=2 S...	[more]
A8E6C5_9BILA	3.602e-59	80.60	Putative 40S ribosomal protein S23 OS=Spadella cep...	[more]
Q09JF5_ARGMO	4.704e-59	81.34	40S ribosomal protein S23 OS=Argas monolakensis PE...	[more]
B9Q5P6_TOXGO	4.704e-59	82.84	Ribosomal protein S23, putative OS=Toxoplasma gond...	[more]
B9PHL8_TOXGO	4.704e-59	82.84	Ribosomal protein S23, putative OS=Toxoplasma gond...	[more]
B6KJ78_TOXGO	4.704e-59	82.84	Ribosomal protein S23, putative OS=Toxoplasma gond...	[more]

BLAST of GR394428 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G02960.1	1.019e-55	76.87	\| Symbols: \| Ribosomal protein S12/S23 family pro...	[more]
AT3G09680.1	8.073e-53	74.63	\| Symbols: \| Ribosomal protein S12/S23 family pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 36..47 score
IPR005680	Ribosomal protein S23, eukaryotic/archaeal	TIGRFAMs	TIGR00982	S23_S12_E_A: ribosomal protein S23 (S12)	coord: 10..138 score: 1.2
IPR006032	Ribosomal protein S12/S23	PIR	PIRSF002133	Ribosomal protein, S12p/S12a/S23e/organellar S12 types	coord: 10..136 score: 1.9
IPR006032	Ribosomal protein S12/S23	PANTHER	PTHR11652	30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER	coord: 61..138 score: 8
IPR006032	Ribosomal protein S12/S23	PFAM	PF00164	Ribosomal_S12	coord: 14..133 score: 2.4
IPR006032	Ribosomal protein S12/S23	PROSITE	PS00055	RIBOSOMAL_S12	coord: 64..71 score
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140	no description	coord: 21..135 score: 5.3
IPR016027	Nucleic acid-binding, OB-fold-like	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 23..138 score: 4

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR394428 ID=GR394428; Name=GR394428; organism=Cicer arietinum; type=EST; length=417bp
TTTTCGCAAAAAACATGGGTAAACCAGCTGGTATTCGAGCAGGACGAAAA
CTCAAGACTGATAGAAGAGAGAATCGATGGGCAGATAAAGAATACAAAAA
GAAACACTTAGGAACTGCCTTCAAATCTAACCCCTTTGGAGGAGCTTCCC
ACGCCAAAGGAATTGTTTTAGAAAAATTAGGTATTGAATCCAAACAACCT
AACTCTGCTATTCGAAAATGTGTCANAGTTCAACTCATTAAAAACGGTAA
AAAAATCACCGCCTTCGTTCCACGAGATGGTTGCCTTAACTTTGTTGATG
AAAACGACGAAGTTCTTGTTGCGGGATTCGGTCGATCTGGTCACGCCGTC
GGAGATATTCCAGGAGTACGATTCAAGATTGTTAAAGTTGCTGGAGTATC
CCTCCTTGCTTTGTTTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0015935	small ribosomal subunit
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR005680	Ribosomal_uS12_euk/arc
IPR006032	Ribosomal_uS12
IPR012340	NA-bd_OB-fold
IPR016027	Nucleic acid-binding, OB-fold-like

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