GR402493
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR402493 vs. SwissProt
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.823e-35 Identity = 84/164 (51.22%), Postives = 109/164 (66.46%), Query Frame = -3 Query: 203 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGC--QEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDD 688 AKS+VI ++++ Y YLESHTVRYNTLRH+A FV + S T DVA ALQEAAK V+ M E VR + N +A+ +G Q++ L Q +D+MDK I +L NEL ANRKCE YR+NLLSVLK +ED KL++S+KV+NIKIS+KD+ Sbjct: 633 AKSSVIFDDYNLHAYANYLESHTVRYNTLRHKASNFVQEAGKSLYTCDVAVVALQEAAKTVSLAMNKE---------VRRTMANRHFKASSVTGGKHQQEVLAQPEPEDEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNIKISLKDN 787
BLAST of GR402493 vs. SwissProt
Match: FRS9_ARATH (Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.467e-17 Identity = 51/142 (35.92%), Postives = 85/142 (59.86%), Query Frame = -3 Query: 206 ESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKD 631 ES + +N+LR EA K+V++GA S + Y VA DAL EAAK+VA + NG+ ++E+R E + + + ++ I +L EL ++CE+YR+NLLS+L+ +E+ K +LS+KV+N ++S+K+ Sbjct: 401 ESLNLCFNSLRQEATKYVEEGAKSIQIYKVAMDALDEAAKKVAAASNRTPGTRLPNGEAYP---SEEAR--------ETANATNHPGGEKERTILELTAELERTGQRCEVYRANLLSILRDMEEQKFQLSLKVQNARLSLKE 531
BLAST of GR402493 vs. TrEMBL
Match: A5BQ59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036221 PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.588e-41 Identity = 94/176 (53.41%), Postives = 117/176 (66.48%), Query Frame = -3 Query: 227 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQHSN----------------------KDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVEN 688 AKS+VILEE + DV YLESHTVRYNTLRHEAFKF D+GA S +TY+VA +LQEAAK+VA + EGR + NG R +D SRA YTSG + SLGQ+ + +DDMD+ I +L EL CAN KCE+YR+NLLSVLK +++HK +LSVKV+N Sbjct: 611 AKSSVILEERASDVLNSYLESHTVRYNTLRHEAFKFADEGAKSIDTYNVAMSSLQEAAKKVALAAKTEGRFDMVNGHFRGQSTSDGSRAYYTSGEHQGSLGQNLSELFLRPDLGGNELGLECERFKVQDDMDRKIRELTEELNCANGKCEVYRANLLSVLKDIDEHKQQLSVKVQN 786
BLAST of GR402493 vs. TrEMBL
Match: B9HPM0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_766957 PE=4 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.648e-39 Identity = 91/161 (56.52%), Postives = 106/161 (65.84%), Query Frame = -3 Query: 206 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKD 688 AKSNVILEEH DVY YLESHTVRYNTLRHEAFKFVD+G+ S +TY+VA ALQEA RVA +NEGR + DMDK I +L +EL ANRKCE+YR+NLLSVLK +EDHKL+LS+KV++IKISMKD Sbjct: 622 AKSNVILEEHPSDVYNGYLESHTVRYNTLRHEAFKFVDEGSKSLDTYNVAMVALQEATTRVALATKNEGRTSVK---------------------------------DMDKKIQELRDELEHANRKCEVYRANLLSVLKDIEDHKLQLSIKVQSIKISMKD 749
BLAST of GR402493 vs. TrEMBL
Match: C0Z3A9_ARATH (AT4G38180 protein OS=Arabidopsis thaliana GN=AT4G38180 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.189e-34 Identity = 84/164 (51.22%), Postives = 109/164 (66.46%), Query Frame = -3 Query: 203 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGC--QEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDD 688 AKS+VI ++++ Y YLESHTVRYNTLRH+A FV + S T DVA ALQEAAK V+ M E VR + N +A+ +G Q++ L Q +D+MDK I +L NEL ANRKCE YR+NLLSVLK +ED KL++S+KV+NIKIS+KD+ Sbjct: 118 AKSSVIFDDYNLHAYANYLESHTVRYNTLRHKASNFVQEAGKSLYTCDVAVVALQEAAKTVSLAMNKE---------VRRTMANRHFKASSVTGGKHQQEVLAQPEPEDEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNIKISLKDN 272
BLAST of GR402493 vs. TrEMBL
Match: B9MZ30_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595037 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.554e-25 Identity = 70/161 (43.48%), Postives = 104/161 (64.60%), Query Frame = -3 Query: 206 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKD 688 AKS +L+E + ++ ES TVRYN LR EA K+V++GA S Y+VA DALQEAAK+V+ V +N+G S G L N S+ + + ++ S + D+ K I +L EL N++CE+YR+NLL+VLK +E+ KL+LSVKV+N ++S+K+ Sbjct: 399 AKSRAVLDEGASELPNDSRESLTVRYNNLRQEAIKYVEEGAKSIHIYNVAMDALQEAAKKVSDV-KNQG----SGGTQGGTLTNGSSQELHVA--KDNSSATLQSVDEKQKKIRELTAELEGTNQRCEVYRANLLAVLKDMEEQKLKLSVKVQNARLSLKE 552
BLAST of GR402493 vs. TrEMBL
Match: D7U4P4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023847001 PE=4 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.063e-25 Identity = 68/161 (42.24%), Postives = 103/161 (63.98%), Query Frame = -3 Query: 206 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKD 688 AKS +L+E + ++ + ES TVRYN+LR EA K+V++GA S Y+VA DALQEA ++VA +N+G G + + N E A +E + + D+ +K I L +EL N++CE+YR+NLL+VLK +ED KL+LSVKV+N ++S+K+ Sbjct: 451 AKSGAVLDEQASELPSNSRESLTVRYNSLRQEAIKYVEEGAKSIHVYNVAMDALQEAVRKVAAA-KNKGPGAAQGGTLANGG-NQEMCAR-----EENRTAPYQSVDEKEKKIRDLASELESTNQRCEVYRANLLAVLKDMEDQKLKLSVKVQNARLSLKE 604
BLAST of GR402493 vs. TrEMBL
Match: D7U4P5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023848001 PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.804e-22 Identity = 52/89 (58.43%), Postives = 68/89 (76.40%), Query Frame = -3 Query: 200 NGKVRSHLLNDESRANYTSGCQEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDDF 466 NG R +D SRA YTSG + SLGQ+ ++DDMD+ I +L EL CAN KCE+YR+NLLSVLK +++HK +LSVKV+N+K+SMKD F Sbjct: 3 NGHFRGQSTSDGSRAYYTSGEHQGSLGQNLSEDDMDRKIRELTEELNCANGKCEVYRANLLSVLKDIDEHKQQLSVKVQNVKLSMKDSF 91
BLAST of GR402493 vs. TrEMBL
Match: D7UDG3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_122.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013441001 PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.443e-20 Identity = 65/161 (40.37%), Postives = 96/161 (59.63%), Query Frame = -3 Query: 209 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRV-AQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMK 688 AKS VIL+EH+ + ES T RY LR EA K+V++GA+S Y+VA DAL EAAK+V A + G P ++ K CQ Q S+ + DK I +L EL A+++CE YR++LL+VLK +E+ KL+++VKV+N ++++K Sbjct: 106 AKSGVILDEHTLGLPGSSQESLTARYENLRREAIKYVEEGAASTHIYNVAMDALHEAAKKVYAAKKQGAGVTPSTSVK----------------ECQLQ-----SSSVEQDKRIEELTAELENASQRCEAYRASLLAVLKDMEEEKLKIAVKVQNTRLNLK 245
BLAST of GR402493 vs. TrEMBL
Match: A5APH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018182 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.401e-13 Identity = 47/102 (46.08%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 383 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQ 688 AKS VILEE + D+ ES TVRYN LRHEA K+VD+G + + Y+VA ALQEAA +VA +N GRI NG R + A+ + G + L Q Sbjct: 626 AKSGVILEERANDLLNSSRESLTVRYNNLRHEALKYVDEGVKTIDIYNVAAAALQEAADKVALAKKNGGRIANVNGAGREDXTTQGNHASASFGDHQWGLEQ 727
BLAST of GR402493 vs. TrEMBL
Match: D7U490_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_44.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026424001 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.687e-12 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = -3 Query: 206 DDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKD 370 DD D+ I KL +L A RKCE+YR+NLLSVLK +E+ KL+LSVKV+NIK+ MKD Sbjct: 6 DDQDRKIQKLSRQLERARRKCEVYRANLLSVLKDIEEQKLQLSVKVQNIKLGMKD 60
BLAST of GR402493 vs. TrEMBL
Match: A5B279_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020585 PE=4 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 6.091e-9 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = -3 Query: 482 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEG 688 AKS +L+E + ++ + ES TVRYN+LR EA K+V++GA S Y+VA DALQEA ++VA +N+G Sbjct: 396 AKSGAVLDEQASELPSNSRESLTVRYNSLRQEAIKYVEEGAKSIHVYNVAMDALQEAVRKVA-AAKNKG 463
BLAST of GR402493 vs. TAIR peptide
Match: AT4G38180.1 (| Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788) HSP 1 Score: 148.673 bits (374), Expect = 2.849e-36 Identity = 84/164 (51.22%), Postives = 109/164 (66.46%), Query Frame = -3 Query: 203 AKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGC--QEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDD 688 AKS+VI ++++ Y YLESHTVRYNTLRH+A FV + S T DVA ALQEAAK V+ M E VR + N +A+ +G Q++ L Q +D+MDK I +L NEL ANRKCE YR+NLLSVLK +ED KL++S+KV+NIKIS+KD+ Sbjct: 633 AKSSVIFDDYNLHAYANYLESHTVRYNTLRHKASNFVQEAGKSLYTCDVAVVALQEAAKTVSLAMNKE---------VRRTMANRHFKASSVTGGKHQQEVLAQPEPEDEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNIKISLKDN 787
BLAST of GR402493 vs. TAIR peptide
Match: AT4G38170.1 (| Symbols: FRS9 | FAR1-related sequence 9 | chr4:17904613-17906439 FORWARD LENGTH=545) HSP 1 Score: 88.5817 bits (218), Expect = 3.499e-18 Identity = 51/142 (35.92%), Postives = 85/142 (59.86%), Query Frame = -3 Query: 206 ESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRNEGRIPISNGKVRSHLLNDESRANYTSGCQEQSLGQHSNKDDMDKHITKLMNELACANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKD 631 ES + +N+LR EA K+V++GA S + Y VA DAL EAAK+VA + NG+ ++E+R E + + + ++ I +L EL ++CE+YR+NLLS+L+ +E+ K +LS+KV+N ++S+K+ Sbjct: 415 ESLNLCFNSLRQEATKYVEEGAKSIQIYKVAMDALDEAAKKVAAASNRTPGTRLPNGEAYP---SEEAR--------ETANATNHPGGEKERTILELTAELERTGQRCEVYRANLLSILRDMEEQKFQLSLKVQNARLSLKE 545 The following BLAST results are available for this feature:
BLAST of GR402493 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 2
BLAST of GR402493 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR402493 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR402493 ID=GR402493; Name=GR402493; organism=Cicer arietinum; type=EST; length=690bpback to top |