GR916406
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR916406 vs. SwissProt
Match: COPT2_MOUSE (Probable low affinity copper uptake protein 2 OS=Mus musculus GN=Slc31a2 PE=1 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 9.377e-9 Identity = 40/134 (29.85%), Postives = 69/134 (51.49%), Query Frame = 2 Query: 14 MHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLI---------QRKLVGSRAKLGVKLA---GAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 M M F +S + LL D W+ S T LS+L L++++ Y+ ++ + +L L + + PA I R +R +L L +++ + IGYF+ML+VMS+N +F+ +V+G A+GY Sbjct: 1 MPMHFIFSDEAVLLFDFWRVHSPTGMALSVLVVLLLAVLYEGIKVGKAKL-LHKTLESLPATNSQQFILGPDQDSTGSRSTSDNRTRLRWFLCYFGQSLVHVIQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGY 133
BLAST of GR916406 vs. SwissProt
Match: COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 2.728e-8 Identity = 33/123 (26.83%), Postives = 52/123 (42.28%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTF+W K +L W S Y L L+ +++ + L + + R G A L ++ + + Y +ML+VMSFN GVF+ + G A+G+ Sbjct: 41 MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLL--------------------RGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGF 143
BLAST of GR916406 vs. TrEMBL
Match: B9RQY6_RICCO (Copper transporter, putative OS=Ricinus communis GN=RCOM_0707700 PE=4 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.407e-34 Identity = 75/123 (60.98%), Postives = 92/123 (74.80%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTFYWSK+VTLL DSWKT +W SY L+LL C+I S YQ LENRR++LK+ A+ + PL+Q K G + + ++AGAVLFGV+SAIGY LML+VMSFNGGV +A V GLAIGY Sbjct: 1 MMHMTFYWSKEVTLLFDSWKTKTWLSYGLTLLVCVITSASYQFLENRRVQLKVNAANAGSAVGVDEPLLQSKTGGGKWSV-ARVAGAVLFGVNSAIGYLLMLAVMSFNGGVLLAAVFGLAIGY 122
BLAST of GR916406 vs. TrEMBL
Match: A9PD84_POPTR (Copper transporter OS=Populus trichocarpa GN=POPTRDRAFT_653794 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.347e-34 Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASG----KQFP-AEIQTPLIQRKLVGSRAK-LGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTFYW ++VT+L++SW T +W Y LSLLACLI SIFYQ LEN R+RLKL +SG K P A I PL++ G + + ++ GAVLFG++S IGY LML VMSFNGGVF+A+V+GLAIGY Sbjct: 1 MMHMTFYWGREVTILVNSWHTKTWLGYSLSLLACLIASIFYQYLENHRMRLKLISSGSVKAKPSPSATIDEPLLRTMGGGGKVRWSAARVGGAVLFGINSGIGYLLMLVVMSFNGGVFLAVVLGLAIGY 129
BLAST of GR916406 vs. TrEMBL
Match: B9MT03_POPTR (Copper transporter OS=Populus trichocarpa GN=POPTRDRAFT_739170 PE=4 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.466e-33 Identity = 74/125 (59.20%), Postives = 89/125 (71.20%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFA--SGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMT YW KVTLL D WKTDSW SY+LSLLAC + S FYQ LE+RRIR K A + Q P + PL+ K S A K A A+LFG+++AIGY LML++MSFNGGVF+AIV+GL +GY Sbjct: 1 MMHMTLYWGIKVTLLFDCWKTDSWFSYLLSLLACFLFSAFYQYLEDRRIRFKAIAVSNPSQQPPPVNAPLLTPKRRASSA----KFATALLFGINAAIGYLLMLAIMSFNGGVFLAIVLGLTVGY 121
BLAST of GR916406 vs. TrEMBL
Match: B9RR93_RICCO (Copper transporter, putative OS=Ricinus communis GN=RCOM_0711470 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.317e-32 Identity = 70/126 (55.56%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGK---QFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMT YW KVTLL DSWKTDSW SY+LSLLAC + S FYQ +E+RRI+ K A+ P+ + PL++ +G + K A A+LFG +SAIGY LML++MSFNGGVF+A V GL++GY Sbjct: 1 MMHMTLYWGIKVTLLFDSWKTDSWPSYLLSLLACFLFSSFYQYMEDRRIKFKSLAAASAATSQPSSVTVPLLRSSKLGRFS--SAKFAAAILFGFNSAIGYLLMLAIMSFNGGVFLATVAGLSVGY 124
BLAST of GR916406 vs. TrEMBL
Match: Q93VM8_ARATH (AT5g20650/T1M15_50 OS=Arabidopsis thaliana GN=At5g20650 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.246e-32 Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFP------AEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTFYW K T+L D WKTDSW SYIL+L+AC + S FYQ LENRRI+ K +S ++ P + + PLI + S + K A +LFGV++AIGY LML+ MSFNGGVFIAIVVGL GY Sbjct: 1 MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAPPPPRSSSGVSAPLIPK----SGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVGLTAGY 125
BLAST of GR916406 vs. TrEMBL
Match: D7TCD9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015065001 PE=4 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.832e-32 Identity = 72/127 (56.69%), Postives = 91/127 (71.65%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFAS--GKQFPAEIQTPLIQRKLVGSRAKLG--VKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMT YW +VTLL SWKTDSW SY LSLLAC + S+FYQ +E+RR+R K AS P++ + KL R + G ++A AVLFGV+SAIGY LML++MSFNGGVF+AIV+GL++GY Sbjct: 1 MMHMTLYWGTQVTLLFSSWKTDSWPSYALSLLACFLFSVFYQNMEDRRLRFKTLASTPAAAPPSQSAATFLLFKLGRGRTRWGNPSRIAEAVLFGVNSAIGYLLMLAIMSFNGGVFVAIVLGLSVGY 127
BLAST of GR916406 vs. TrEMBL
Match: D7M035_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910107 PE=4 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 8.536e-32 Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFP-----AEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTFYW K T+L D WKTDSW SYIL+L+AC + S FYQ LENRRI+ K +S ++ P + + PLI + S + K A +LFGV++AIGY LML+ MSFNGGVFIAIV GL GY Sbjct: 1 MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRPPPPRSSSGVSAPLIPK----SGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVAGLTAGY 124
BLAST of GR916406 vs. TrEMBL
Match: Q69P80_ORYSJ (Os09g0440700 protein OS=Oryza sativa subsp. japonica GN=OJ1344_B01.31 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.363e-29 Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRK-----LVGSRA--KLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTFYW K VT+L D W+T +WT Y+LSL+A L+ S FYQ LE RIR+KL A K PA I P L+ S A + +LA A LFGV+S +GY LML+VMSFNGGVF+A+VVGLA GY Sbjct: 1 MMHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAK--PASIPPPASSDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVFVAVVVGLAAGY 128
BLAST of GR916406 vs. TrEMBL
Match: B9G3U9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_29521 PE=4 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.363e-29 Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRK-----LVGSRA--KLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTFYW K VT+L D W+T +WT Y+LSL+A L+ S FYQ LE RIR+KL A K PA I P L+ S A + +LA A LFGV+S +GY LML+VMSFNGGVF+A+VVGLA GY Sbjct: 165 MMHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAK--PASIPPPASSDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVFVAVVVGLAAGY 292
BLAST of GR916406 vs. TrEMBL
Match: A2Z1P3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31527 PE=4 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.363e-29 Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRK-----LVGSRA--KLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTFYW K VT+L D W+T +WT Y+LSL+A L+ S FYQ LE RIR+KL A K PA I P L+ S A + +LA A LFGV+S +GY LML+VMSFNGGVF+A+VVGLA GY Sbjct: 1 MMHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAK--PASIPPPASSDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVFVAVVVGLAAGY 128
BLAST of GR916406 vs. TAIR peptide
Match: AT5G20650.1 (| Symbols: COPT5 | copper transporter 5 | chr5:6985481-6985921 REVERSE LENGTH=146) HSP 1 Score: 141.739 bits (356), Expect = 1.032e-34 Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFP------AEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTFYW K T+L D WKTDSW SYIL+L+AC + S FYQ LENRRI+ K +S ++ P + + PLI + S + K A +LFGV++AIGY LML+ MSFNGGVFIAIVVGL GY Sbjct: 1 MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAPPPPRSSSGVSAPLIPK----SGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVGLTAGY 125
BLAST of GR916406 vs. TAIR peptide
Match: AT5G59040.1 (| Symbols: COPT3 | copper transporter 3 | chr5:23836724-23837179 FORWARD LENGTH=151) HSP 1 Score: 69.707 bits (169), Expect = 4.982e-13 Identity = 41/123 (33.33%), Postives = 57/123 (46.34%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTF+W K +L D W S Y + L ++S F + L R SG A LG L ++ V +A+ Y +ML+VMSFNGGVF+A + G +G+ Sbjct: 29 MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLS----RCGFMKSGP-------------------ASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGF 128
BLAST of GR916406 vs. TAIR peptide
Match: AT2G26975.1 (| Symbols: | Ctr copper transporter family | chr2:11512992-11513429 FORWARD LENGTH=145) HSP 1 Score: 67.0106 bits (162), Expect = 3.229e-12 Identity = 38/123 (30.89%), Postives = 62/123 (50.41%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTF+W K +L W S Y+L L+ ++++ + L + I ++ + SRAK V+ A ++ + + + Y +ML+VMSFNGGVFI + G A+G+ Sbjct: 24 MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSI-------------------LRGRGSTSRAKGLVQTA---VYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGF 124
BLAST of GR916406 vs. TAIR peptide
Match: AT3G46900.1 (| Symbols: COPT2 | copper transporter 2 | chr3:17268887-17269363 FORWARD LENGTH=158) HSP 1 Score: 61.2326 bits (147), Expect = 1.772e-10 Identity = 33/123 (26.83%), Postives = 56/123 (45.53%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTF+W K +L W S Y L L+ ++++ + L + +P+++ V LA ++ + + + Y +ML+VMSFN GVFI + G +G+ Sbjct: 29 MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAH-------------------SPILR---VSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGF 129
BLAST of GR916406 vs. TAIR peptide
Match: AT5G59030.1 (| Symbols: COPT1 | copper transporter 1 | chr5:23833945-23834457 REVERSE LENGTH=170) HSP 1 Score: 57.3806 bits (137), Expect = 2.558e-9 Identity = 33/123 (26.83%), Postives = 52/123 (42.28%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 MMHMTF+W K +L W S Y L L+ +++ + L + + R G A L ++ + + Y +ML+VMSFN GVF+ + G A+G+ Sbjct: 41 MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLL--------------------RGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGF 143
BLAST of GR916406 vs. TAIR peptide
Match: AT2G37925.1 (| Symbols: COPT4 | copper transporter 4 | chr2:15870258-15870695 REVERSE LENGTH=145) HSP 1 Score: 50.447 bits (119), Expect = 3.128e-7 Identity = 34/123 (27.64%), Postives = 57/123 (46.34%), Query Frame = 2 Query: 11 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGY 379 ++H TFYW +L W Y L+L+ ++ + L R +S KQ ++ AK+ + A ++ V S Y ++L+V+SFNGGVF+A + G A+G+ Sbjct: 29 LLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLA----RCSDASSIKQGADKL-------------AKVAFRTA---MYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGF 131 The following BLAST results are available for this feature:
BLAST of GR916406 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 2
BLAST of GR916406 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR916406 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR916406 ID=GR916406; Name=GR916406; organism=Cicer arietinum; type=EST; length=379bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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