GR916648

EST Overview


Name	GR916648
Unique Name	GR916648
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	400

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.149e-19
Identity = 45/52 (86.54%), Postives = 49/52 (94.23%), Query Frame = -2

Query:  244 TDSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 399
            TDSK+INDRETGRSRGFGFVTF   +SMRDAIEGMNGQ++DGRNITVNEAQS
Sbjct:   33 TDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQS 84

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18
Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   +SM+DAIEGMNGQD+DGR+ITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQS 86

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18
Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   +SM+DAIEGMNGQD+DGR+ITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQS 86

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.830e-18
Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   ++M+DAIEGMNGQD+DGR+ITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQS 86

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.075e-17
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+I DRETGRSRGFGFVTF++ ++MR AIE MNGQD+DGRNITVNEAQS
Sbjct:   34 DSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQS 84

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.396e-17
Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSKVI DRETGRSRGFGFVTFS+ QSM DAIE MNG+++DGRNITVN+AQS
Sbjct:   36 DSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQS 86

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.104e-17
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSKVI DRETGRSRGFGFVTFS+  SM DAIE MNG+++DGRNITVN+AQS
Sbjct:   36 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQS 86

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.028e-16
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            +SK+I DRET RSRGFGFVTFST ++MR AIEGMNG+++DGRNITVNEAQS
Sbjct:   15 ESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQS 65

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.649e-16
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   +SM+DAI+ MNG+++DGR ITVNEAQS
Sbjct:   34 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQS 84

[Close]

BLAST of GR916648 vs. SwissProt
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.707e-16
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRE+GRSRGFGFVTF   ++MRDAIE MNG+++DGR ITVNEAQS
Sbjct:   34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQS 84

[Close]

BLAST of GR916648 vs. TrEMBL
Match: Q8RW11_RUMOB (Putative glycine rich protein OS=Rumex obtusifolius GN=grp PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.416e-18
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            +SK+INDRETGRSRGFGFVTFS+ Q+MRDAIEGMNGQD+DGRNITVNEAQS
Sbjct:   35 ESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQS 85

[Close]

BLAST of GR916648 vs. TrEMBL
Match: Q6ASX7_ORYSJ (Glycine-rich RNA binding protein OS=Oryza sativa subsp. japonica GN=B1130H05.5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNG+++DGRNITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQS 86

[Close]

BLAST of GR916648 vs. TrEMBL
Match: Q10FE7_ORYSJ (Os03g0670700 protein OS=Oryza sativa subsp. japonica GN=Os03g0670700 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNG+++DGRNITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQS 86

[Close]

BLAST of GR916648 vs. TrEMBL
Match: Q10FE5_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g46770 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNG+++DGRNITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQS 86

[Close]

BLAST of GR916648 vs. TrEMBL
Match: B8AP37_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12955 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNG+++DGRNITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQS 86

[Close]

BLAST of GR916648 vs. TrEMBL
Match: Q25C92_LOLPR (Glycine-rich RNA-binding protein OS=Lolium perenne PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-18
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = -2

Query:  244 TDSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 399
            TD K+INDRETGRSRGFGFVTFS+ +SM++AIEGMNGQD+DGRNITVNEAQS
Sbjct:   32 TDCKIINDRETGRSRGFGFVTFSSSESMKNAIEGMNGQDLDGRNITVNEAQS 83

[Close]

BLAST of GR916648 vs. TrEMBL
Match: O24106_NICGU (RNA-binding protein OS=Nicotiana glutinosa PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-18
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   Q+MRDAIEGMNGQD+DGRNITVNEAQS
Sbjct:   34 DSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84

[Close]

BLAST of GR916648 vs. TrEMBL
Match: D7TQ21_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031973001 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-18
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            +SK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNGQ++DGRNITVNEAQS
Sbjct:   36 ESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQS 86

[Close]

BLAST of GR916648 vs. TrEMBL
Match: B2YKT9_TOBAC (Glycine-rich RNA-binding protein OS=Nicotiana tabacum GN=GRP1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-18
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   Q+MRDAIEGMNGQD+DGRNITVNEAQS
Sbjct:   34 DSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84

[Close]

BLAST of GR916648 vs. TrEMBL
Match: Q40426_NICSY (RNA-binding glycine-rich protein-1a OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.028e-18
Identity = 44/51 (86.27%), Postives = 48/51 (94.12%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   ++MRDAIEGMNGQD+DGRNITVNEAQS
Sbjct:   34 DSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQS 84

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT2G21660.2 (| Symbols: ATGRP7, CCR2 | cold, circadian rhythm, and rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=159)

HSP 1 Score: 90.5077 bits (223), Expect = 3.148e-19
Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   ++M+DAIEGMNGQD+DGR+ITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQS 86

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT2G21660.1 (| Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold, circadian rhythm, and rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=176)

HSP 1 Score: 90.5077 bits (223), Expect = 3.148e-19
Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRETGRSRGFGFVTF   ++M+DAIEGMNGQD+DGR+ITVNEAQS
Sbjct:   36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQS 86

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT4G39260.3 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=92)

HSP 1 Score: 82.4185 bits (202), Expect = 8.573e-17
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRE+GRSRGFGFVTF   ++MRDAIE MNG+++DGR ITVNEAQS
Sbjct:   34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQS 84

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT4G39260.2 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=126)

HSP 1 Score: 82.4185 bits (202), Expect = 8.573e-17
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRE+GRSRGFGFVTF   ++MRDAIE MNG+++DGR ITVNEAQS
Sbjct:   34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQS 84

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT4G39260.1 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=169)

HSP 1 Score: 82.4185 bits (202), Expect = 8.573e-17
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            DSK+INDRE+GRSRGFGFVTF   ++MRDAIE MNG+++DGR ITVNEAQS
Sbjct:   34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQS 84

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT3G26420.1 (| Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain | chr3:9671953-9673055 FORWARD LENGTH=245)

HSP 1 Score: 63.1586 bits (152), Expect = 5.382e-11
Identity = 28/50 (56.00%), Postives = 40/50 (80.00%), Query Frame = -2

Query:  247 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQ 396
            ++KV+ D+ +GRSRGFGF+TF   ++M +AI  MNG D+DGR ITV++AQ
Sbjct:   35 EAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQ 84

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT3G53460.4 (| Symbols: CP29 | chloroplast RNA-binding protein 29 | chr3:19819738-19821423 REVERSE LENGTH=363)

HSP 1 Score: 62.7734 bits (151), Expect = 7.029e-11
Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            +++VI DR++GRS+GFGFVT S+ Q ++ AI  +NG D+DGR I V+EA++
Sbjct:  306 EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEA 356

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT3G53460.3 (| Symbols: CP29 | chloroplast RNA-binding protein 29 | chr3:19819738-19821423 REVERSE LENGTH=342)

HSP 1 Score: 62.7734 bits (151), Expect = 7.029e-11
Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            +++VI DR++GRS+GFGFVT S+ Q ++ AI  +NG D+DGR I V+EA++
Sbjct:  285 EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEA 335

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT3G53460.2 (| Symbols: CP29 | chloroplast RNA-binding protein 29 | chr3:19819738-19821423 REVERSE LENGTH=342)

HSP 1 Score: 62.7734 bits (151), Expect = 7.029e-11
Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            +++VI DR++GRS+GFGFVT S+ Q ++ AI  +NG D+DGR I V+EA++
Sbjct:  285 EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEA 335

[Close]

BLAST of GR916648 vs. TAIR peptide
Match: AT3G53460.1 (| Symbols: CP29 | chloroplast RNA-binding protein 29 | chr3:19819738-19821423 REVERSE LENGTH=342)

HSP 1 Score: 62.7734 bits (151), Expect = 7.029e-11
Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = -2

Query:  244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396
            +++VI DR++GRS+GFGFVT S+ Q ++ AI  +NG D+DGR I V+EA++
Sbjct:  285 EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEA 335

The following BLAST results are available for this feature:

BLAST of GR916648 vs. SwissProt
BLAST of GR916648 vs. TrEMBL
BLAST of GR916648 vs. TAIR peptide

BLAST of GR916648 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
GRP1_DAUCA	1.149e-19	86.54	Glycine-rich RNA-binding protein OS=Daucus carota ...	[more]
GRP2_SINAL	1.270e-18	84.31	Glycine-rich RNA-binding protein GRP2A OS=Sinapis ...	[more]
GRP1_SINAL	1.270e-18	84.31	Glycine-rich RNA-binding protein GRP1A OS=Sinapis ...	[more]
GRP7_ARATH	2.830e-18	82.35	Glycine-rich RNA-binding protein 7 OS=Arabidopsis ...	[more]
GRP_HORVU	1.075e-17	80.39	Glycine-rich RNA-binding protein blt801 OS=Hordeum...	[more]
GRP2_SORBI	2.396e-17	82.35	Glycine-rich RNA-binding protein 2 OS=Sorghum bico...	[more]
GRPA_MAIZE	9.104e-17	80.39	Glycine-rich RNA-binding, abscisic acid-inducible ...	[more]
GRP1_SORBI	2.028e-16	78.43	Glycine-rich RNA-binding protein 1 (Fragment) OS=S...	[more]
GRP10_BRANA	2.649e-16	76.47	Glycine-rich RNA-binding protein 10 OS=Brassica na...	[more]
GRP8_ARATH	7.707e-16	76.47	Glycine-rich RNA-binding protein 8 OS=Arabidopsis ...	[more]

BLAST of GR916648 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q8RW11_RUMOB	1.416e-18	88.24	Putative glycine rich protein OS=Rumex obtusifoliu...	[more]
Q6ASX7_ORYSJ	1.850e-18	88.24	Glycine-rich RNA binding protein OS=Oryza sativa s...	[more]
Q10FE7_ORYSJ	1.850e-18	88.24	Os03g0670700 protein OS=Oryza sativa subsp. japoni...	[more]
Q10FE5_ORYSJ	1.850e-18	88.24	Retrotransposon protein, putative, Ty1-copia subcl...	[more]
B8AP37_ORYSI	1.850e-18	88.24	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q25C92_LOLPR	2.416e-18	84.62	Glycine-rich RNA-binding protein OS=Lolium perenne...	[more]
O24106_NICGU	2.416e-18	88.24	RNA-binding protein OS=Nicotiana glutinosa PE=2 SV...	[more]
D7TQ21_VITVI	2.416e-18	88.24	Whole genome shotgun sequence of line PN40024, sca...	[more]
B2YKT9_TOBAC	2.416e-18	88.24	Glycine-rich RNA-binding protein OS=Nicotiana taba...	[more]
Q40426_NICSY	7.028e-18	86.27	RNA-binding glycine-rich protein-1a OS=Nicotiana s...	[more]

BLAST of GR916648 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT2G21660.2	3.148e-19	82.35	\| Symbols: ATGRP7, CCR2 \| cold, circadian rhythm, ...	[more]
AT2G21660.1	3.148e-19	82.35	\| Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 \| cold, cir...	[more]
AT4G39260.3	8.573e-17	76.47	\| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 \| cold, cir...	[more]
AT4G39260.2	8.573e-17	76.47	\| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 \| cold, cir...	[more]
AT4G39260.1	8.573e-17	76.47	\| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 \| cold, cir...	[more]
AT3G26420.1	5.382e-11	56.00	\| Symbols: ATRZ-1A \| RNA-binding (RRM/RBD/RNP moti...	[more]
AT3G53460.4	7.029e-11	52.94	\| Symbols: CP29 \| chloroplast RNA-binding protein ...	[more]
AT3G53460.3	7.029e-11	52.94	\| Symbols: CP29 \| chloroplast RNA-binding protein ...	[more]
AT3G53460.2	7.029e-11	52.94	\| Symbols: CP29 \| chloroplast RNA-binding protein ...	[more]
AT3G53460.1	7.029e-11	52.94	\| Symbols: CP29 \| chloroplast RNA-binding protein ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 11..22 score: NAcoord: 28..81 score
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 1..13 score: 5.8e-12coord: 13..29 score: 5.8e-12coord: 31..48 score: 5.8
None	No IPR available	SEG	seg	seg	coord: 1..49 score
None	No IPR available	SEG	seg	seg	coord: 5..80 score
None	No IPR available	PANTHER	PTHR10432	RNA-BINDING PROTEIN	coord: 1..104 score: 4.8
None	No IPR available	SEG	seg	seg	coord: 53..104 score: NAcoord: 105..125 score
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 1..84 score: 1.3
None	No IPR available	SEG	seg	seg	coord: 6..59 score
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 2..46 score: 4.5
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 1..52 score: 12
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 2..53 score: 1.7
IPR015465	RNA recognition motif, glycine rich protein	PANTHER	PTHR10432:SF31	GLYCINE-RICH RNA-BINDING PROTEIN	coord: 1..104 score: 4.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR916648 ID=GR916648; Name=GR916648; organism=Cicer arietinum; type=EST; length=400bp
GCGGCCGCCCGGGCAGGTACCCTCCAGTTTCACCACCTTACCACTACTCC
TCACCACCACCACCACCAACAAAGAAACCATACTACTACCATAACCACCA
CCACCTCCTCCGCCATATCCACCTCCACCACCATATCCTCCACCGCCACC
TCTGTTATATCCACCTTCACGACGTCCACCACCATATCCACCGCCTCCAC
CATATCCACCGGCACCACGGCCGCCTCCACCACCGCTACCACGAGACTGA
GCTTCGTTCACGGTAATGTTACGTCCGTCAACATCTTGACCGTTCATCCC
TTCAATTGCGTCTCTCATGGATTGCCCAGTTGAAAACGTGACAAATCCAA
AACCCCTTGACCTTCCAGTCTCACGGTCGTTAATAACCTTGGAATCAGTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR015465	RNA recognition motif, glycine rich protein

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