HO062392

EST Overview
NameHO062392
Unique NameHO062392
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length608
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062392 vs. TrEMBL
Match: B9RXV5_RICCO (Transcription regulator, putative OS=Ricinus communis GN=RCOM_0906550 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.531e-12
Identity = 42/131 (32.06%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  209 GNKPNKAEENGKNLKSPNKEASAKNGNEGPAKKELATKKEPEKV------VENSSLPLTEMFRFDSGVGLSGLNENVAKKGLELIENSKRVDLEDKWKELQIVEMELFLERAQLIRDQTSALVKVQKKSSN 583
            G   +  + NGK  K+ N  A +    +  A+  +   KE EKV      +EN S     + +FD GVG+SG+ + V K+GL++++ +K+ ++E+KW++L + E+ELFL R +L R+Q   ++   K   +
Sbjct:  267 GASDSSIKPNGKAKKATNNNAKSLVALK--AELGMDVDKENEKVDKMDVELENHS----SLKQFDRGVGVSGMEDYVIKRGLDMVQGAKKAEMEEKWRKLHVAELELFLRRNELTREQAKLMLASYKNEQD 391          
BLAST of HO062392 vs. TrEMBL
Match: B9GI96_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_753066 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 3.868e-8
Identity = 38/123 (30.89%), Postives = 63/123 (51.22%), Query Frame = -2
Query:  221 EENGKNLKSPNKEASAKNGNEGPAKKELATKKEPEKVVENSSLPLTEMFR---------FDSGVGLSGLNENVAKKGLELIENSKRVDLEDKWKELQIVEMELFLERAQLIRDQTSALVKVQK 562
            ++NG+   S N   + K GN   AKK  A+K E    V        EM R         FDS V +  + + V + GL  +  +++  +E++W++L + E+ELFL+R +LIR+Q   ++   K
Sbjct:  257 KDNGRKNDSGNTSNNNKTGN---AKKPEASKPELGMDVGEEDRVEVEMARGSSVKSVLKFDSNVSVERMEDYVVRMGLNFVHGTEKEKMEEEWRKLHVAELELFLKRNELIREQAKLMLTAFK 376          
BLAST of HO062392 vs. TrEMBL
Match: B9HMZ5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557514 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.125e-7
Identity = 31/124 (25.00%), Postives = 64/124 (51.61%), Query Frame = -2
Query:  221 QVRGNKPNKAEENGKNLKSPNKEASAKNGNEGPAKKELATKKEPEKVVENSSLPLTEMFRFDSGVGLSGLNENVAKKGLELIENSKRVDLEDKWKELQIVEMELFLERAQLIRDQTSALVKVQK 592
            +  G K N + +N K      +   A+ G +   ++ +  + E +  V+       ++ +FD  V    +++ V + GL+     K+ ++E+KW++L + E+ELFL+R +LIR+Q   ++   K
Sbjct:  261 KANGKKNNNSNDNRKGNAKKLEALKAELGMDVGEEERMEVEMERDSSVK-------KVLKFDGSVSGGKMDDYVVRNGLDFAHGMKKAEMEEKWRKLHMAELELFLKRNELIREQAKLMLSAFK 377          
BLAST of HO062392 vs. TrEMBL
Match: A9PAA7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.125e-7
Identity = 31/124 (25.00%), Postives = 64/124 (51.61%), Query Frame = -2
Query:  221 QVRGNKPNKAEENGKNLKSPNKEASAKNGNEGPAKKELATKKEPEKVVENSSLPLTEMFRFDSGVGLSGLNENVAKKGLELIENSKRVDLEDKWKELQIVEMELFLERAQLIRDQTSALVKVQK 592
            +  G K N + +N K      +   A+ G +   ++ +  + E +  V+       ++ +FD  V    +++ V + GL+     K+ ++E+KW++L + E+ELFL+R +LIR+Q   ++   K
Sbjct:  267 KANGKKNNNSNDNRKGNAKKLEALKAELGMDVGEEERMEVEMERDSSVK-------KVLKFDGSVSGGKMDDYVVRNGLDFAHGMKKAEMEEKWRKLHMAELELFLKRNELIREQAKLMLSAFK 383          
The following BLAST results are available for this feature:
BLAST of HO062392 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9RXV5_RICCO7.531e-1232.06Transcription regulator, putative OS=Ricinus commu... [more]
B9GI96_POPTR3.868e-830.89Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HMZ5_POPTR1.125e-725.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PAA7_POPTR1.125e-725.00Putative uncharacterized protein OS=Populus tricho... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 8..24
score: NAcoord: 79..97
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062392 ID=HO062392; Name=HO062392; organism=Cicer arietinum; type=EST; length=608bp
CCAACCAGATATTCAAACATACTAAAATCATCAAAACAATCAAATGGCTA
ATAATTTCATGTAGTAGTCAATAATCAAACAACACACAGTAGTTAAATAA
AATGCTAGATAACGTGTTGCTGCAAAATCACTACAAAAATAACTAGATGA
TAGATCCAAAACATGTTCCAGATTAGCCACAAAACTATGCCTAAGAAAGA
TAATCCTAATTGCTTGATTTCTTCTGTACCTTCACCAAAGCACTAGTCTG
ATCCCTAATCAGCTGTGCCCGCTCCAAAAATAGCTCCATCTCCACAATTT
GCAGCTCCTTCCACTTATCCTCTAAATCGACCCTCTTAGAATTCTCAATC
AACTCCAATCCCTTTTTCGCCACATTCTCATTCAAACCAGACAAACCAAC
ACCACTGTCAAAACGAAACATTTCAGTCAAAGGCAAACTTGAATTTTCAA
CCACTTTTTCAGGTTCCTTCTTAGTTGCTAATTCTTTCTTAGCAGGACCT
TCATTACCGTTTTTAGCACTAGCTTCCTTGTTGGGACTCTTGAGGTTTTT
TCCGTTTTCTTCGGCTTTGTTGGGTTTATTGCCCCGTACCTGCCCGGGCG
GCCGCTCG
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