HO063081

EST Overview
NameHO063081
Unique NameHO063081
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length669
Libraries
Library NameType
LIBEST_026409 Chickpea drought stressed cDNA SSH library AB2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO063081 vs. TrEMBL
Match: A5C0T2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009755 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.265e-23
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = -2
Query:   18 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGK 464
            MSR +R KEK+ K   L +DN    +AARTRPFSF+EIMLRRK+K+L  +VKD A E  N S +  +  ++D +ES + YKH++ S      H+ E+ V VSSRKK E+T  KE +L + +D+ ++  E K  +   NKG   K K GK
Sbjct:    1 MSRSNRPKEKYGKSTELYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGNISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGKVKDKESHNSEDKLKA-KPNKGMTDKSKEGK 148          
BLAST of HO063081 vs. TrEMBL
Match: D7SZK9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027871001 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.024e-19
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = -2
Query:   18 LSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGK 416
            L +DN    +AARTRPFSF+EIMLRRK+K+L  +VKD A E  N S +  +  ++D +ES + YKH++ S      H+ E+ V VSSRKK E+T  KE +L   +D+ ++  E K  +   NKG   K K GK
Sbjct:   48 LYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGNISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGNVKDKESHNSEDKLKA-KPNKGMTDKSKEGK 179          
BLAST of HO063081 vs. TrEMBL
Match: B9HSR5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_565795 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.589e-11
Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = -2
Query:   15 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLN-NKGWLTKEKTGKE 464
            MSR  R K+K+ +   +S D+    +AARTRPFSF+EIM  RK+K+  + ++   K+          +K +DH  S R   H++ SS    +H  EE    S RKK ++   KED + + RDR     E+KS + +N +     KEKT ++
Sbjct:    2 MSRSSRHKDKYGRSSEMSQDHQYEGTAARTRPFSFDEIMSIRKNKKASEILEGELKDILG---GVINEKASDH-RSERGNGHNEESSTGLRQHLSEEHGKASYRKKEDNVSMKEDYIAKGRDRDVRDSETKSKAKMNEDMRTEVKEKTNEK 148          
BLAST of HO063081 vs. TrEMBL
Match: Q3EBP3_ARATH (Putative uncharacterized protein At2g33435.1 OS=Arabidopsis thaliana GN=At2g33435 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 9.023e-7
Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = -2
Query:   12 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGKEK 464
            M+  ++ KE    RD      ++  SAARTRP S EEI LRRK KE L+NVK+    A        ++K +D+ ES  + + + +   S ++   +E ++    +K+E    KED +   +    N++E       + KG+   EK   E+
Sbjct:    1 MNEVNKQKEN---RDGHETLVNEEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAAQLLGYDLVEKASDYHESKNLRREEHVEDSSRKE---KEAISRCREEKIEKP-MKEDPVGAAQLPDKNLVEKVLDCHESEKGYDRSEKLSHEE 144          
BLAST of HO063081 vs. TrEMBL
Match: Q0WRM4_ARATH (RRM-containing protein (Fragment) OS=Arabidopsis thaliana GN=At2g33435 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 9.023e-7
Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = -2
Query:   12 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGKEK 464
            M+  ++ KE    RD      ++  SAARTRP S EEI LRRK KE L+NVK+    A        ++K +D+ ES  + + + +   S ++   +E ++    +K+E    KED +   +    N++E       + KG+   EK   E+
Sbjct:    1 MNEVNKQKEN---RDGHETLVNEEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAARLLGYDLVEKASDYHESKNLRREEHVEDSSRKE---KEAISRCREEKIEKP-MKEDPVGAAQLPDKNLVEKVLDCHESEKGYDRSEKLSHEE 144          
BLAST of HO063081 vs. TAIR peptide
Match: AT2G33435.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:14166037-14169492 FORWARD LENGTH=979)

HSP 1 Score: 57.7658 bits (138), Expect = 6.263e-9
Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = -2
Query:   12 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGKEK 464
            M+  ++ KE    RD      ++  SAARTRP S EEI LRRK KE L+NVK+    A        ++K +D+ ES  + + + +   S ++   +E ++    +K+E    KED +   +    N++E       + KG+   EK   E+
Sbjct:    1 MNEVNKQKEN---RDGHETLVNEEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAAQLLGYDLVEKASDYHESKNLRREEHVEDSSRKE---KEAISRCREEKIEKP-MKEDPVGAAQLPDKNLVEKVLDCHESEKGYDRSEKLSHEE 144          
The following BLAST results are available for this feature:
BLAST of HO063081 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
A5C0T2_VITVI5.265e-2344.97Putative uncharacterized protein OS=Vitis vinifera... [more]
D7SZK9_VITVI6.024e-1944.36Whole genome shotgun sequence of line PN40024, sca... [more]
B9HSR5_POPTR1.589e-1135.10Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q3EBP3_ARATH9.023e-729.80Putative uncharacterized protein At2g33435.1 OS=Ar... [more]
Q0WRM4_ARATH9.023e-729.80RRM-containing protein (Fragment) OS=Arabidopsis t... [more]
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BLAST of HO063081 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G33435.16.263e-929.80| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..39
score
NoneNo IPR availableSEGsegsegcoord: 4..19
score: NAcoord: 27..41
score
NoneNo IPR availableSEGsegsegcoord: 14..28
score
NoneNo IPR availableSEGsegsegcoord: 11..25
score
NoneNo IPR availableSEGsegsegcoord: 36..52
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO063081 ID=HO063081; Name=HO063081; organism=Cicer arietinum; type=EST; length=669bp
CTTGAACCACGCTTCTCTTTTCCAGTCTTTTCTTTCGTTAGCCAGCCTTT
ATTATTTAATCCAGAACTTGACTTGGATTCTAAAATATTGTTTGCTCTAT
CTCGCTCTTCAGTTAAATCATCTTCCTTCGCATAGGTGCTCTCAACTTTC
TTTCTTGAACTTACATTCACAGGTTCCTCTAAAGCATGTTTCTCTGTGCT
TAAGGATGAAATCTTATCATGTTTGTAAATTCTTGGAGACTCAAAATGAT
CAGCAATTTTATCCAAAGAAGCTTCGGGTGAAGTATTCCATGCTTCCTTA
GCAGGGTCTTTAACATTATCAAGCAATTCTTTGCTTTTTCTTCTAAGCAT
AATCTCTTCAAAACTAAATGGTCTTGTGCGGGCCGCACTATCTACATCAT
GATTATCCACAGAAAGCCGATCTCTTTTTATGTGCTTCTCCTTTGAACGA
TCAGGTCTGCTCATCTTGTATGATGTAATGAAATCACAAAAAGAAACTAA
TCACTTCTGTACTAAGAGATTAAGAGCGCATCAGTGAACTGACATGTTGA
ATGCTCGAAACTACTCCAAGATAAATATGCCATATCCTGGAGAGAGAAGG
TGAATATGGTGACCGTGGTGGAGAAAGTGAAAACAGAGCGATACAAAACA
AGCTCAGCGTAGAGCAGTC
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