HO063081
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO063081 vs. TrEMBL
Match: A5C0T2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009755 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.265e-23 Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 18 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGK 464 MSR +R KEK+ K L +DN +AARTRPFSF+EIMLRRK+K+L +VKD A E N S + + ++D +ES + YKH++ S H+ E+ V VSSRKK E+T KE +L + +D+ ++ E K + NKG K K GK Sbjct: 1 MSRSNRPKEKYGKSTELYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGNISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGKVKDKESHNSEDKLKA-KPNKGMTDKSKEGK 148
BLAST of HO063081 vs. TrEMBL
Match: D7SZK9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027871001 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.024e-19 Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = -2 Query: 18 LSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGK 416 L +DN +AARTRPFSF+EIMLRRK+K+L +VKD A E N S + + ++D +ES + YKH++ S H+ E+ V VSSRKK E+T KE +L +D+ ++ E K + NKG K K GK Sbjct: 48 LYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGNISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGNVKDKESHNSEDKLKA-KPNKGMTDKSKEGK 179
BLAST of HO063081 vs. TrEMBL
Match: B9HSR5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_565795 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.589e-11 Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = -2 Query: 15 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLN-NKGWLTKEKTGKE 464 MSR R K+K+ + +S D+ +AARTRPFSF+EIM RK+K+ + ++ K+ +K +DH S R H++ SS +H EE S RKK ++ KED + + RDR E+KS + +N + KEKT ++ Sbjct: 2 MSRSSRHKDKYGRSSEMSQDHQYEGTAARTRPFSFDEIMSIRKNKKASEILEGELKDILG---GVINEKASDH-RSERGNGHNEESSTGLRQHLSEEHGKASYRKKEDNVSMKEDYIAKGRDRDVRDSETKSKAKMNEDMRTEVKEKTNEK 148
BLAST of HO063081 vs. TrEMBL
Match: Q3EBP3_ARATH (Putative uncharacterized protein At2g33435.1 OS=Arabidopsis thaliana GN=At2g33435 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.023e-7 Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = -2 Query: 12 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGKEK 464 M+ ++ KE RD ++ SAARTRP S EEI LRRK KE L+NVK+ A ++K +D+ ES + + + + S ++ +E ++ +K+E KED + + N++E + KG+ EK E+ Sbjct: 1 MNEVNKQKEN---RDGHETLVNEEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAAQLLGYDLVEKASDYHESKNLRREEHVEDSSRKE---KEAISRCREEKIEKP-MKEDPVGAAQLPDKNLVEKVLDCHESEKGYDRSEKLSHEE 144
BLAST of HO063081 vs. TrEMBL
Match: Q0WRM4_ARATH (RRM-containing protein (Fragment) OS=Arabidopsis thaliana GN=At2g33435 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.023e-7 Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = -2 Query: 12 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGKEK 464 M+ ++ KE RD ++ SAARTRP S EEI LRRK KE L+NVK+ A ++K +D+ ES + + + + S ++ +E ++ +K+E KED + + N++E + KG+ EK E+ Sbjct: 1 MNEVNKQKEN---RDGHETLVNEEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAARLLGYDLVEKASDYHESKNLRREEHVEDSSRKE---KEAISRCREEKIEKP-MKEDPVGAAQLPDKNLVEKVLDCHESEKGYDRSEKLSHEE 144
BLAST of HO063081 vs. TAIR peptide
Match: AT2G33435.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:14166037-14169492 FORWARD LENGTH=979) HSP 1 Score: 57.7658 bits (138), Expect = 6.263e-9 Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = -2 Query: 12 MSRPDRSKEKHIKRDRLSVDNHDVDSAARTRPFSFEEIMLRRKSKELLDNVKDPAKEAWNTSPEASLDKIADHFESPRIYKHDKISSLSTEKHALEEPVNVSSRKKVESTYAKEDDLTEERDRANNILESKSSSGLNNKGWLTKEKTGKEK 464 M+ ++ KE RD ++ SAARTRP S EEI LRRK KE L+NVK+ A ++K +D+ ES + + + + S ++ +E ++ +K+E KED + + N++E + KG+ EK E+ Sbjct: 1 MNEVNKQKEN---RDGHETLVNEEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAAQLLGYDLVEKASDYHESKNLRREEHVEDSSRKE---KEAISRCREEKIEKP-MKEDPVGAAQLPDKNLVEKVLDCHESEKGYDRSEKLSHEE 144 The following BLAST results are available for this feature:
BLAST of HO063081 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 5
BLAST of HO063081 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO063081 ID=HO063081; Name=HO063081; organism=Cicer arietinum; type=EST; length=669bpback to top |