HO065861

EST Overview
NameHO065861
Unique NameHO065861
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length429
Libraries
Library NameType
LIBEST_026412 Chickpea drought stressed cDNA SSH library AS1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of HO065861 vs. TrEMBL
Match: Q41059_PEA (Starch branching enzyme II (Fragment) OS=Pisum sativum GN=SBEII PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.703e-11
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 3 
Query:  165 HTSKNKQQLAKQKPVELALGYQNPNGCKVFGFESRGSIFERV 290
            H SKNKQ LAKQKPVEL LGYQNPNGCKV  F S+GSI+++V
Sbjct:    8 HNSKNKQYLAKQKPVELTLGYQNPNGCKVCSFGSKGSIYQKV 49
The following BLAST results are available for this feature:
BLAST of HO065861 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q41059_PEA3.703e-1176.19Starch branching enzyme II (Fragment) OS=Pisum sat... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 15..30
score
NoneNo IPR availableSEGsegsegcoord: 10..26
score
NoneNo IPR availableSEGsegsegcoord: 7..20
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO065861 ID=HO065861; Name=HO065861; organism=Cicer arietinum; type=EST; length=429bp
TAGCGTGGTCGCGGCCGAGGTACGCGGGGACTCTTCTCCTTATGGAGACT
GCTTTAACCTGAACCTTGATCGAAGCTGATTCTGGACTTCAATTTAGAGA
CATGATTTCCTCTCTGAGTTTTAATCCTCTCATTTCTTCCTCTTTAAACA
TTGGCTGCATCATTCACACCTCGAAAAATAAGCAGCAACTTGCCAAGCAA
AAGCCAGTAGAGTTGGCCCTGGGCTATCAGAATCCAAATGGATGCAAGGT
GTTCGGTTTTGAATCAAGAGGATCAATATTTGAGAGGGTATAATTTGACT
TTGTTTTGATGTCTCTAGTATATGCTGCCAGGTCAATTATTTTTGAGAAA
CTTTGATGCGACTGTGCTGTTCTAATTGATATCCTTTGTCTTGTTTGGAT
AATGTACCTGGCCCGGGCGGCCGCTCGAA
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