HO067841

EST Overview
NameHO067841
Unique NameHO067841
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length510
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO067841 vs. TrEMBL
Match: D7U4M0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023822001 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.309e-7
Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = -3
Query:   44 MGSACCVAAKDRRDLESV------HRDVVCSPPWSFRWDSRGRVTGEI 169
            MGSACCVAA+DR            HR+V  SP WSFRWD+RGRV GE+
Sbjct:    1 MGSACCVAARDRTITNGPSCEVMQHRNVRYSPSWSFRWDNRGRVAGEV 48          
BLAST of HO067841 vs. TrEMBL
Match: B9RH88_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1448750 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.644e-7
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = -3
Query:   47 MGSACCVAAKDRRDL-----ESVHRDVVCSPPWSFRWDSRGRVTGE 169
            MG ACCVAA+D+  +     E +HR++  SP WSFRWD+RGRV GE
Sbjct:    1 MGGACCVAARDKNIVNGPGSEILHRNIRHSPTWSFRWDNRGRVAGE 46          
BLAST of HO067841 vs. TrEMBL
Match: B9HRJ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821161 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.627e-7
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = -3
Query:   47 MGSACCVAAKDRRDLES-----VHRDVVCSPPWSFRWDSRGRVTGE 169
            MG ACCVAA+D+  +       +HR++  SP WSFRWD+RGRV GE
Sbjct:    1 MGGACCVAARDKNIVSGPGGDILHRNIRYSPSWSFRWDNRGRVAGE 46          
BLAST of HO067841 vs. TAIR peptide
Match: AT1G75400.1 (| Symbols: | RING/U-box superfamily protein | chr1:28297609-28299464 FORWARD LENGTH=455)

HSP 1 Score: 53.5286 bits (127), Expect = 7.274e-8
Identity = 28/53 (52.83%), Postives = 31/53 (58.49%), Query Frame = -3
Query:   32 MGSACCVAAKDRR-------DLESVHRDVVCSPPWSFRWDSRGRVTGEIRILP 169
            MGS CCVA KDR+          SVHR+  CSP WSFR D+R RV  EI   P
Sbjct:    1 MGSVCCVAVKDRKVPPSGGPASSSVHRNSACSPQWSFRRDNRRRVADEIEGSP 53          
BLAST of HO067841 vs. TAIR peptide
Match: AT1G19680.1 (| Symbols: | RING/U-box superfamily protein | chr1:6805909-6807682 FORWARD LENGTH=444)

HSP 1 Score: 52.373 bits (124), Expect = 1.620e-7
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = -3
Query:   41 MGSACCVAAKDRRDLESVHRDVVCSPPWSFRWDSRGRVTGEIR 169
            MGS CCVAAKDR        + VCSP WSFR D+R RV  EI+
Sbjct:    1 MGSVCCVAAKDRNVPSGAIDNSVCSPSWSFRRDNRRRVADEIK 43          
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.5 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429)

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3
Query:   47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169
            MG+ACCVAA+D+  +      E++ R ++  SP WSFRWD+RGRV GE
Sbjct:    1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48          
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.4 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429)

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3
Query:   47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169
            MG+ACCVAA+D+  +      E++ R ++  SP WSFRWD+RGRV GE
Sbjct:    1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48          
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.3 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429)

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3
Query:   47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169
            MG+ACCVAA+D+  +      E++ R ++  SP WSFRWD+RGRV GE
Sbjct:    1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48          
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.2 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429)

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3
Query:   47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169
            MG+ACCVAA+D+  +      E++ R ++  SP WSFRWD+RGRV GE
Sbjct:    1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48          
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.1 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429)

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3
Query:   47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169
            MG+ACCVAA+D+  +      E++ R ++  SP WSFRWD+RGRV GE
Sbjct:    1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48          
The following BLAST results are available for this feature:
BLAST of HO067841 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D7U4M0_VITVI3.309e-758.33Whole genome shotgun sequence of line PN40024, sca... [more]
B9RH88_RICCO5.644e-756.52Ubiquitin-protein ligase, putative OS=Ricinus comm... [more]
B9HRJ8_POPTR9.627e-754.35Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of HO067841 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7
Match NameE-valueIdentityDescription
AT1G75400.17.274e-852.83| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G19680.11.620e-758.14| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G39140.56.158e-752.08| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G39140.46.158e-752.08| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G39140.36.158e-752.08| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G39140.26.158e-752.08| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G39140.16.158e-752.08| Symbols: | RING/U-box superfamily protein | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 34..46
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO067841 ID=HO067841; Name=HO067841; organism=Cicer arietinum; type=EST; length=510bp
AGATTTCTGCTTACTACATGAGACGTGTGATAGGAAGGATTCTAATTTCA
CCAGTAACACGCCCCCGACTATCCCATCGAAAGCTCCATGGTGGCGAACA
TACAACATCTCTATGCACACTTTCAAGATCTCTACGATCTTTTGCAGCAA
CACAACAAGCCGAACCCATGATACCAAGATATTACAACAGAAGACTCAAA
AGCCACCTTAATTCCCAACCAAAAACTGTAATCTACTTCCTTCTGAAGAA
CAAACAAAATGAAAGTAAGACTAAACTGAGAATTTCAAGAAACCAAACAA
AAAATCATCCAAACATAAAAAAGCACACTTCAATACTCTGCCCTTACAAA
TCTAGTACAGTGAGCACATGCCATCATAATACTCAATCATCAACAAACAT
TTCTATTAATTGCACACAACAATTAGAAATTAAATACCAAGAACAAAAAC
CTTTAAACAGCTTCTACCGCAATTGAAATGTGAACTTAAAGGCTTCCAAT
AACAGAACAT
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