CD051311

EST Overview


Name	CD051311
Unique Name	CD051311
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	158

Libraries


Library Name	Type
LIBEST_013035 subtracted cDNA library of drought-stressed chickpea	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28

Homology

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.068e-12
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  225 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 266

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 1.068e-12
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  230 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 271

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.395e-12
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3

Query:   12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  242 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 279

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.380e-12
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNK+DN
Sbjct:  232 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDN 273

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.108e-12
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.108e-12
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.108e-12
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.059e-12
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3

Query:   12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  240 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 277

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.059e-12
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3

Query:   12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  238 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275

[Close]

BLAST of CD051311 vs. SwissProt
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.059e-12
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3

Query:   12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  235 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 272

[Close]

BLAST of CD051311 vs. TrEMBL
Match: Q9FUI0_MAIZE (Ribulose 1,5-bisphosphate carboxylase/oxygenase activase (Fragment) OS=Zea mays PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  105 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 146

[Close]

BLAST of CD051311 vs. TrEMBL
Match: Q8GTY4_MEDSA (Rubisco activase (Fragment) OS=Medicago sativa GN=Rca PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:   69 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 110

[Close]

BLAST of CD051311 vs. TrEMBL
Match: C0P5X1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  180 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 221

[Close]

BLAST of CD051311 vs. TrEMBL
Match: B8BIM0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37096 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  225 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 266

[Close]

BLAST of CD051311 vs. TrEMBL
Match: B6T416_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  230 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 271

[Close]

BLAST of CD051311 vs. TrEMBL
Match: A6N1P5_ORYSI (Ribulose bisphosphate carboxylase/oxygenase activase (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:   65 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 106

[Close]

BLAST of CD051311 vs. TrEMBL
Match: B9HMK4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_421185 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.831e-11
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3

Query:   12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  241 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 278

[Close]

BLAST of CD051311 vs. TrEMBL
Match: A9PJF4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.831e-11
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3

Query:   12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  241 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 278

[Close]

BLAST of CD051311 vs. TrEMBL
Match: A9PJ06_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.831e-11
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3

Query:   12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  240 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 277

[Close]

BLAST of CD051311 vs. TrEMBL
Match: A9PG25_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.831e-11
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3

Query:   12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN
Sbjct:  162 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 199

[Close]

BLAST of CD051311 vs. TAIR peptide
Match: AT2G39730.3 (| Symbols: RCA | rubisco activase | chr2:16571174-16573345 REVERSE LENGTH=441)

HSP 1 Score: 70.4774 bits (171), Expect = 2.482e-13
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275

[Close]

BLAST of CD051311 vs. TAIR peptide
Match: AT2G39730.2 (| Symbols: RCA | rubisco activase | chr2:16571046-16573345 REVERSE LENGTH=446)

HSP 1 Score: 70.4774 bits (171), Expect = 2.482e-13
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275

[Close]

BLAST of CD051311 vs. TAIR peptide
Match: AT2G39730.1 (| Symbols: RCA | rubisco activase | chr2:16570951-16573345 REVERSE LENGTH=474)

HSP 1 Score: 70.4774 bits (171), Expect = 2.482e-13
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3

Query:    9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125
            +GR G   +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N
Sbjct:  234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275

The following BLAST results are available for this feature:

BLAST of CD051311 vs. SwissProt
BLAST of CD051311 vs. TrEMBL
BLAST of CD051311 vs. TAIR peptide

BLAST of CD051311 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RCA_ORYSJ	1.068e-12	83.33	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_MAIZE	1.068e-12	83.33	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_PHAVU	1.395e-12	86.84	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_SPIOL	2.380e-12	80.95	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_ARATH	3.108e-12	80.95	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA2_LARTR	3.108e-12	80.95	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA1_LARTR	3.108e-12	80.95	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_PHAAU	4.059e-12	84.21	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_MALDO	4.059e-12	84.21	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_CUCSA	4.059e-12	84.21	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]

BLAST of CD051311 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9FUI0_MAIZE	2.168e-11	83.33	Ribulose 1,5-bisphosphate carboxylase/oxygenase ac...	[more]
Q8GTY4_MEDSA	2.168e-11	83.33	Rubisco activase (Fragment) OS=Medicago sativa GN=...	[more]
C0P5X1_MAIZE	2.168e-11	83.33	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B8BIM0_ORYSI	2.168e-11	83.33	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B6T416_MAIZE	2.168e-11	83.33	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
A6N1P5_ORYSI	2.168e-11	83.33	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
B9HMK4_POPTR	2.831e-11	86.84	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
A9PJF4_9ROSI	2.831e-11	86.84	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PJ06_9ROSI	2.831e-11	86.84	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PG25_POPTR	2.831e-11	86.84	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of CD051311 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G39730.3	2.482e-13	80.95	\| Symbols: RCA \| rubisco activase \| chr2:16571174-...	[more]
AT2G39730.2	2.482e-13	80.95	\| Symbols: RCA \| rubisco activase \| chr2:16571046-...	[more]
AT2G39730.1	2.482e-13	80.95	\| Symbols: RCA \| rubisco activase \| chr2:16570951-...	[more]

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CD051311 ID=CD051311; Name=CD051311; organism=Cicer arietinum; type=EST; length=158bp
GGCTTTCGAGCGGCCGCCCGGGCAGGTACACAGTAAACAATCAAATGGTA
AATGCAACACTTATGAACATTGTTGATAACCCAACAAATGTTCAACTACC
TGGTATGTATAACAAGGAAGATAATCCACGTGTACCTCGGCCGCGACCAC
GCTAAGCC

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