GR397044

EST Overview
NameGR397044
Unique NameGR397044
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length652
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR397044 vs. TrEMBL
Match: D7SNQ8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_29.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021020001 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 4.157e-9
Identity = 52/154 (33.77%), Postives = 66/154 (42.86%), Query Frame = 1
Query:  175 IEHRNGEQNKLKESNKAGLIGLNSSAQVSKHSHENSIIGENLNKQKEIDSNGVLHGEYHNKNLNKRKEIDSNGFLHGECHTKQKEIDSNGFLHANEXXXXXXXXXXXXXXFTENGRILEPCQISLQNASDGP-VAATNVKVENMERKTNGIIEA 633
            IEH+N E +K KESNK  +           H+ + S + ++ NK    + N                            H K+K+ D+NGFLH NE                ENGR LEPCQ S+   SD     A N+KVEN E K NGII A
Sbjct:  307 IEHKNKELDKSKESNKDDV--------TVTHNIKTSHLHKDSNKSAATEGN----------------------------HRKRKDSDTNGFLHVNE-VKPNKLPRPTSHPLIENGRKLEPCQTSILITSDRQGGTANNLKVENKEHKLNGIIGA 423          
BLAST of GR397044 vs. TrEMBL
Match: B9GFJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_549791 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 8.667e-7
Identity = 50/159 (31.45%), Postives = 67/159 (42.14%), Query Frame = 1
Query:  178 EHRNGEQNKLKESNKAGLIGLNSSAQVSKHSHENSIIGENLNKQKEIDSNGVLHGEYHNKNLNKRKEIDSNGFLHGECHTKQKEIDSNGFLHANEXXXXXXXXXXXXXXFT-ENGRILEPCQISLQNASDGPVAATNVKVENMERKTNGIIEAPTPAVS 651
            EH+  EQ+KLKES K+  +  N+     K SH            KEI ++ V     H  N+ KRK+ D+NG                 FLHAN+               + ENGR+L  CQ           A  N KV+N   K NG+IEA   ++S
Sbjct:  326 EHKKKEQDKLKESGKSDAVANNTV----KPSH----------LPKEITNSAV-----HEVNIKKRKDSDTNG-----------------FLHANDIKPDKLPRPASSLPLSAENGRMLGTCQNPTAAIRGKQEAVNNDKVDNKGHKINGLIEAQALSIS 448          
The following BLAST results are available for this feature:
BLAST of GR397044 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
D7SNQ8_VITVI4.157e-933.77Whole genome shotgun sequence of line PN40024, sca... [more]
B9GFJ9_POPTR8.667e-731.45Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..58
score: NAcoord: 155..168
score
NoneNo IPR availableSEGsegsegcoord: 26..58
score
NoneNo IPR availableSEGsegsegcoord: 11..68
score
NoneNo IPR availableSEGsegsegcoord: 14..25
score: NAcoord: 36..54
score
NoneNo IPR availableSEGsegsegcoord: 1..14
score: NAcoord: 104..166
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR397044 ID=GR397044; Name=GR397044; organism=Cicer arietinum; type=EST; length=652bp
GAAAAAAAAGATGATAGGCGGGGAGATAAAAAGAAAGATGATAAGCGGGG
AGATAAAAAGAAAGATGATAAACGAGGAGATAAAAGAAAAGGAAACGAGA
AGGAGAAGAAAGGGCATGGGAAGGACAAAGACAGGGATAAAAAGAAAAAA
AAGGAGGATAAAGCAAAGGAGAAAATTGAGCATAGAAATGGAGAGCAGAA
TAAATTAAAAGAAAGCAACAAAGCTGGCCTAATAGGCTTAAATTCTTCTG
CACAAGTATCCAAGCACAGCCATGAAAATTCTATCATCGGGGAAAATCTT
AATAAACAGAAGGAAATTGATTCAAATGGAGTTCTACATGGTGAGTACCA
TAATAAAAATCTCAATAAACGGAAGGAAATTGATTCAAATGGATTTCTAC
ATGGTGAGTGCCATACTAAACAGAAGGAAATCGATTCAAATGGATTTCTA
CATGCCAATGAAAGTAGGCCCAGTAAGTTGCCAAGGCCCTCTTCCTCTCA
TCCTTTCACTGAAAATGGAAGGATCTTGGAACCTTGCCAAATTTCCCTTC
AAAATGCTTCAGATGGGCCAGTAGCCGCCACTAATGTTAAGGTAGAAAAC
ATGGAACGCAAGACAAATGGCATCATTGAAGCTCCAACACCTGCTGTTTC
TC
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