HO067521

EST Overview


Name	HO067521
Unique Name	HO067521
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	582

Libraries


Library Name	Type
LIBEST_026414 Chickpea drought stressed cDNA SSH library BULK1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067521 vs. SwissProt
Match: EWS_MOUSE (RNA-binding protein EWS OS=Mus musculus GN=Ewsr1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.159e-22
Identity = 59/151 (39.07%), Postives = 76/151 (50.33%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPV-------VEPGVADNVVGPEETEGDANGVSGRG--------------RGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRC 399
            TG+P I +Y DKET +PKGDATV+YEDP  A AAVEWF+ KDF G+ + V +A  K   +     +       + P +     GP    G    + GRG              RG     G  + + GDW CPN  C N NFA+R  CN+C
Sbjct:  392 TGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGMPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQC 542

[Close]

BLAST of HO067521 vs. SwissProt
Match: EWS_HUMAN (RNA-binding protein EWS OS=Homo sapiens GN=EWSR1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.159e-22
Identity = 59/151 (39.07%), Postives = 76/151 (50.33%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPV-------VEPGVADNVVGPEETEGDANGVSGRG--------------RGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRC 399
            TG+P I +Y DKET +PKGDATV+YEDP  A AAVEWF+ KDF G+ + V +A  K   +     +       + P +     GP    G    + GRG              RG     G  + + GDW CPN  C N NFA+R  CN+C
Sbjct:  393 TGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQC 543

[Close]

BLAST of HO067521 vs. SwissProt
Match: RBP56_HUMAN (TATA-binding protein-associated factor 2N OS=Homo sapiens GN=TAF15 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.514e-22
Identity = 56/137 (40.88%), Postives = 75/137 (54.74%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGR-------GLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRC 399
            TG+P I LY DK+T +PKG+ATV+++DP +A AA++WF+ K+FHGN I V  A  +                     PE   G  +G   RGR       G     G P+   GDW+CPN SC N+NFA R +CN+C
Sbjct:  266 TGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRR---------------------PEFMRGGGSGGGRRGRGGYRGRGGFQGRGGDPK--SGDWVCPNPSCGNMNFARRNSCNQC 379

[Close]

BLAST of HO067521 vs. SwissProt
Match: CAZ_DROME (RNA-binding protein cabeza OS=Drosophila melanogaster GN=caz PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.417e-20
Identity = 57/152 (37.50%), Postives = 78/152 (51.32%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLID--------------------ASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGT 405
            T +PKIWLY++KET   KG+ATVTY+D +AA +A+EWF+ +DF+GN I V +A+ +N  ++        G      G     G   G  G G G  D                      G  + ++GDW C   SC+N NFA+R  CNRC T
Sbjct:  152 TMKPKIWLYKNKETGASKGEATVTYDDTNAAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKG-GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGGRYDRGGGGGGGGGGGNVQPRDGDWKC--NSCNNTNFAWRNECNRCKT 300

[Close]

BLAST of HO067521 vs. SwissProt
Match: FUS_MOUSE (RNA-binding protein FUS OS=Mus musculus GN=Fus PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.672e-19
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEG--DANGVSGRGRGLIDA---SGKPRQQEGDWLCPNTSCSNVNFAFRGACNRC 399
            TG+P I LY D+ET + KG+ATV+++DP +A AA++WF+ K+F GN I V  A  +      +N     G      G     G     G  G GRG   +    G  +Q+ GDW CPN +C N+NF++R  CN+C
Sbjct:  310 TGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRR----ADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQC 440

[Close]

BLAST of HO067521 vs. SwissProt
Match: FUS_HUMAN (RNA-binding protein FUS OS=Homo sapiens GN=FUS PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.672e-19
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEG--DANGVSGRGRGLIDA---SGKPRQQEGDWLCPNTSCSNVNFAFRGACNRC 399
            TG+P I LY D+ET + KG+ATV+++DP +A AA++WF+ K+F GN I V  A  +      +N     G      G     G     G  G GRG   +    G  +Q+ GDW CPN +C N+NF++R  CN+C
Sbjct:  317 TGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRR----ADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQC 447

[Close]

BLAST of HO067521 vs. SwissProt
Match: FUS_BOVIN (RNA-binding protein FUS OS=Bos taurus GN=FUS PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.672e-19
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEG--DANGVSGRGRGLIDA---SGKPRQQEGDWLCPNTSCSNVNFAFRGACNRC 399
            TG+P I LY D+ET + KG+ATV+++DP +A AA++WF+ K+F GN I V  A  +      +N     G      G     G     G  G GRG   +    G  +Q+ GDW CPN +C N+NF++R  CN+C
Sbjct:  304 TGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRR----ADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQC 434

[Close]

BLAST of HO067521 vs. SwissProt
Match: ZRAB2_CHICK (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.855e-12
Identity = 33/89 (37.08%), Postives = 41/89 (46.07%), Query Frame = 1

Query:  316 RQQEGDWLCPNTSCSNVNFAFRGACNRCGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            R  +GDW+CP+  C NVNFA R +CNRCG                                  + GLF  NDW C  CGN+NWA+R +C
Sbjct:    7 RVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTL----------AEKSRGLFSANDWQCKTCGNVNWARRSEC 85

[Close]

BLAST of HO067521 vs. SwissProt
Match: ZRAB2_RAT (Zinc finger Ran-binding domain-containing protein 2 OS=Rattus norvegicus GN=Zranb2 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 9.206e-12
Identity = 32/89 (35.96%), Postives = 40/89 (44.94%), Query Frame = 1

Query:  316 RQQEGDWLCPNTSCSNVNFAFRGACNRCGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            R  +GDW+CP+  C NVNFA R +CNRCG                                  + GLF  NDW C  C N+NWA+R +C
Sbjct:    7 RVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTL----------AEKSRGLFSANDWQCKTCSNVNWARRSEC 85

[Close]

BLAST of HO067521 vs. SwissProt
Match: ZRAB2_PONAB (Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.206e-12
Identity = 32/89 (35.96%), Postives = 40/89 (44.94%), Query Frame = 1

Query:  316 RQQEGDWLCPNTSCSNVNFAFRGACNRCGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            R  +GDW+CP+  C NVNFA R +CNRCG                                  + GLF  NDW C  C N+NWA+R +C
Sbjct:    7 RVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTL----------AEKSRGLFSANDWQCKTCSNVNWARRSEC 85

[Close]

BLAST of HO067521 vs. TrEMBL
Match: C6TM21_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 6.571e-76
Identity = 138/191 (72.25%), Postives = 141/191 (73.82%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TGRPKIWLYRDKET+EPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGV+IAESKNKDDQ YN  VEPGV DNV G EET  D NG SGRGRG  D SGK  QQ+GDWLC NTSCSNVNFAFRGACNRCGT                             P G   GLFGPNDWPCPMCGNINWAKR KC
Sbjct:   45 TGRPKIWLYRDKETNEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVFIAESKNKDDQAYNAAVEPGVTDNVGGLEETTKDVNGGSGRGRGQNDTSGKAWQQDGDWLCLNTSCSNVNFAFRGACNRCGTARPAGASGISGAGGRGKGRAAQESGGIGRPAG--GGLFGPNDWPCPMCGNINWAKRTKC 233

[Close]

BLAST of HO067521 vs. TrEMBL
Match: B9S3N2_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_1385570 PE=4 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.327e-68
Identity = 123/191 (64.40%), Postives = 132/191 (69.11%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TGRPKIWLYRDK T+EPKGDATVTYEDPHAA AA+EWFNNKDFHGN IGV++AESKNKD+  YN  V+P    +  G EET GD N   GRGRG  DASGK  QQEGDWLCPNTSCSNVNFAFRG CNRCG+                                 + GLFGPNDWPCPMCGNINWAKR KC
Sbjct:   46 TGRPKIWLYRDKLTNEPKGDATVTYEDPHAAQAAIEWFNNKDFHGNLIGVFMAESKNKDEHAYNSEVDPNAVGDFGGLEETAGDMNDDGGRGRGKGDASGKAWQQEGDWLCPNTSCSNVNFAFRGVCNRCGSARPSGASGGSAGAGRGRGRGGQNSGGLGRAATGSTGLFGPNDWPCPMCGNINWAKRTKC 236

[Close]

BLAST of HO067521 vs. TrEMBL
Match: D7TAD5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010206001 PE=4 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.123e-67
Identity = 127/198 (64.14%), Postives = 139/198 (70.20%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTY------NPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TGRPKIWLYRDK T+EPKGDATVTYEDPHAA+AAVEWFNNKDFHG+ IGV+IAESKNKDD +Y      N V +PG A ++ G EE   D NG +GRGRG  DA+GK  QQ+GDWLCPNTSCSNVNFAFRG CNRCG+                               VGA  GLFGPNDWPCPMCGNINWAKR KC
Sbjct:   45 TGRPKIWLYRDKVTNEPKGDATVTYEDPHAALAAVEWFNNKDFHGSIIGVFIAESKNKDDHSYNSGNQVNDVGDPGAASDLRGLEEDPLDMNGSAGRGRGRGDAAGKAWQQDGDWLCPNTSCSNVNFAFRGVCNRCGSARPSGVSGSGAGAGGRGRGRGGPDSAGHGRSVGAPTGLFGPNDWPCPMCGNINWAKRTKC 242

[Close]

BLAST of HO067521 vs. TrEMBL
Match: B9HY23_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_881806 PE=4 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.510e-67
Identity = 125/192 (65.10%), Postives = 136/192 (70.83%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TGRPKIWLYRDK T+EPKGDATVTYEDPHAA+AAVEWFNNKDFHGNTIGV+IA+SK+KDDQ +NPV +P  +  +   EE   D N   GRGRG  DASGK  QQEGDWLCPNTSCSNVNFAFRG CN CG+                               VGA  GLFGPNDWPCPMCGNINWAKR+KC
Sbjct:   45 TGRPKIWLYRDKMTNEPKGDATVTYEDPHAALAAVEWFNNKDFHGNTIGVFIAQSKSKDDQAFNPVDDPNDSGVL---EENAKDLNEGGGRGRGRGDASGKAWQQEGDWLCPNTSCSNVNFAFRGVCNLCGSARPSGPSGGAAGGGGRGRGRGANDSGAHGRSVGAPTGLFGPNDWPCPMCGNINWAKRMKC 233

[Close]

BLAST of HO067521 vs. TrEMBL
Match: B9HI59_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_564190 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.770e-64
Identity = 122/192 (63.54%), Postives = 132/192 (68.75%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TGRPKIWLYRDK T+EPKGDATVTYEDPHAA+AAVEWFNNKDFHGN IGV+IA+SK+KDD  YN V +P   ++  G EE   D N   GRGRG  DASGK  QQ+GDWLCPNTSCSNVNFAFRG CNRC +                               VGA  GLFGPNDW CPMCGNINWAKR KC
Sbjct:   45 TGRPKIWLYRDKMTNEPKGDATVTYEDPHAALAAVEWFNNKDFHGNIIGVFIAQSKSKDDTVYNSVDDP---NDFGGFEENAKDLNEGGGRGRGQDDASGKAWQQDGDWLCPNTSCSNVNFAFRGVCNRCASARPSGPSGGGAGAGGHGRGRGANDIGVPGRSVGAPTGLFGPNDWTCPMCGNINWAKRSKC 233

[Close]

BLAST of HO067521 vs. TrEMBL
Match: Q9AST1_ARATH (At1g50300/F14I3_23 OS=Arabidopsis thaliana GN=TAF15 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.424e-62
Identity = 121/193 (62.69%), Postives = 132/193 (68.39%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGT--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TG PK+WLYRDKETDEPKGDATVTYEDPHAA+AAVEWFNNKDFHGNTIGV++AESKNK+       VE    D   G EET    NG +GRGRG  D+S KP QQ+GDW+CPNTSC+NVNFAFRG CNRCGT                               P GA  GLFGPNDW CPMCGN+NWAKRLKC
Sbjct:   40 TGTPKVWLYRDKETDEPKGDATVTYEDPHAALAAVEWFNNKDFHGNTIGVFMAESKNKN---AGDAVEFVEFDG--GAEET----NGGAGRGRGQADSSAKPWQQDGDWMCPNTSCTNVNFAFRGVCNRCGTARPAGASGGSMGAGRGRGRGGGADGGAPGKQPSGAPTGLFGPNDWACPMCGNVNWAKRLKC 223

[Close]

BLAST of HO067521 vs. TrEMBL
Match: D7KFY0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_891960 PE=4 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.622e-60
Identity = 116/197 (58.88%), Postives = 129/197 (65.48%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDA---NGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TG PK+WLYRDKETDEPKGDATVTYEDPHAA+AAVEWFNNKDFHGNTIGV++AES++K             A + V   E +G A   N  +GRGRG  D S KP QQ+GDW+CPNTSC+NVNFAFRG CNRCGT                                P GA  GLFGPNDW CPMCGN+NWAKRLKC
Sbjct:   45 TGTPKVWLYRDKETDEPKGDATVTYEDPHAALAAVEWFNNKDFHGNTIGVFMAESRHKS------------AGDAVEFVEFDGGAQETNEGAGRGRGQADPSAKPWQQDGDWMCPNTSCTNVNFAFRGVCNRCGTARPAGASGGSMGAGGRGRGRGGGADGGAPGKQPSGAPTGLFGPNDWACPMCGNVNWAKRLKC 229

[Close]

BLAST of HO067521 vs. TrEMBL
Match: Q69TN3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OSJNBa0062A09.7 PE=4 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.798e-57
Identity = 114/194 (58.76%), Postives = 125/194 (64.43%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGT---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TGRPKIW+YRDK T+EPKGDATVTYEDPHAA AAVEWFNNKDFHG+TI V+IAESKNKD  TY+       +  + G +E +  A    GRGRG  D  GK  QQ+GDWLCPNTSC NVNFAFRG CNRCG                                  VG   GLFGPNDW CPMCGNINWAKR+KC
Sbjct:   44 TGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESKNKD--TYDNSASLNNSAGLGGQDELDNGA----GRGRGHGDGPGKAWQQDGDWLCPNTSCGNVNFAFRGVCNRCGAARPAGVSGSGAGGGGRGRGRGSDDAKGGSRAAAVGGPPGLFGPNDWSCPMCGNINWAKRMKC 231

[Close]

BLAST of HO067521 vs. TrEMBL
Match: B8BEA5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30792 PE=4 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.798e-57
Identity = 114/194 (58.76%), Postives = 125/194 (64.43%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGT---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TGRPKIW+YRDK T+EPKGDATVTYEDPHAA AAVEWFNNKDFHG+TI V+IAESKNKD  TY+       +  + G +E +  A    GRGRG  D  GK  QQ+GDWLCPNTSC NVNFAFRG CNRCG                                  VG   GLFGPNDW CPMCGNINWAKR+KC
Sbjct:  101 TGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESKNKD--TYDNSASLNNSAGLGGQDELDNGA----GRGRGHGDGPGKAWQQDGDWLCPNTSCGNVNFAFRGVCNRCGAARPAGVSGSGAGGGGRGRGRGSDDAKGGSRAAAVGGPPGLFGPNDWSCPMCGNINWAKRMKC 288

[Close]

BLAST of HO067521 vs. TrEMBL
Match: Q6YS82_ORYSJ (Os07g0296200 protein OS=Oryza sativa subsp. japonica GN=B1272H04.13-1 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.831e-57
Identity = 113/197 (57.36%), Postives = 124/197 (62.94%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRC------GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TGRPKIW+YRDK T+EPKGDATVTYEDPHAA AAVEWFNNKDFHG+TI V+IAESKNKD    +       +  + G +E +   NG  GRGRG  D  GK  QQ+GDWLCPNTSC NVNFAFRG CN C      G                               VG   GLFGPNDWPCPMCGNINWAKR+KC
Sbjct:   44 TGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESKNKDMNDSSATASLNNSAELGGQDELD---NG-EGRGRGRGDGPGKAWQQDGDWLCPNTSCGNVNFAFRGVCNLCGAARPAGVSGSSAGGGGRGRGRGSDDARGGSRAAAAAAVGGPPGLFGPNDWPCPMCGNINWAKRMKC 236

[Close]

BLAST of HO067521 vs. TAIR peptide
Match: AT1G50300.1 (| Symbols: TAF15 | TBP-associated factor 15 | chr1:18628818-18631662 REVERSE LENGTH=372)

HSP 1 Score: 241.891 bits (616), Expect = 1.867e-64
Identity = 121/193 (62.69%), Postives = 132/193 (68.39%), Query Frame = 1

Query:   10 TGRPKIWLYRDKETDEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYNPVVEPGVADNVVGPEETEGDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCGT--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGATAGLFGPNDWPCPMCGNINWAKRLKC 582
            TG PK+WLYRDKETDEPKGDATVTYEDPHAA+AAVEWFNNKDFHGNTIGV++AESKNK+       VE    D   G EET    NG +GRGRG  D+S KP QQ+GDW+CPNTSC+NVNFAFRG CNRCGT                               P GA  GLFGPNDW CPMCGN+NWAKRLKC
Sbjct:   40 TGTPKVWLYRDKETDEPKGDATVTYEDPHAALAAVEWFNNKDFHGNTIGVFMAESKNKN---AGDAVEFVEFDG--GAEET----NGGAGRGRGQADSSAKPWQQDGDWMCPNTSCTNVNFAFRGVCNRCGTARPAGASGGSMGAGRGRGRGGGADGGAPGKQPSGAPTGLFGPNDWACPMCGNVNWAKRLKC 223

[Close]

BLAST of HO067521 vs. TAIR peptide
Match: AT5G58470.2 (| Symbols: TAF15b | TBP-associated factor 15B | chr5:23638566-23640854 REVERSE LENGTH=422)

HSP 1 Score: 52.373 bits (124), Expect = 2.098e-7
Identity = 25/49 (51.02%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  256 GDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCG 402
            G   G  G  RG   + G  R  +GDW CPN SC NVNFA R  CN+CG
Sbjct:   64 GGGGGYQGGDRGGRGSGGGGR--DGDWRCPNPSCGNVNFARRVECNKCG 110

[Close]

BLAST of HO067521 vs. TAIR peptide
Match: AT5G58470.1 (| Symbols: TAF15b | TBP-associated factor 15B | chr5:23638566-23640854 REVERSE LENGTH=422)

HSP 1 Score: 52.373 bits (124), Expect = 2.098e-7
Identity = 25/49 (51.02%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  256 GDANGVSGRGRGLIDASGKPRQQEGDWLCPNTSCSNVNFAFRGACNRCG 402
            G   G  G  RG   + G  R  +GDW CPN SC NVNFA R  CN+CG
Sbjct:   64 GGGGGYQGGDRGGRGSGGGGR--DGDWRCPNPSCGNVNFARRVECNKCG 110

The following BLAST results are available for this feature:

BLAST of HO067521 vs. SwissProt
BLAST of HO067521 vs. TrEMBL
BLAST of HO067521 vs. TAIR peptide

BLAST of HO067521 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
EWS_MOUSE	1.159e-22	39.07	RNA-binding protein EWS OS=Mus musculus GN=Ewsr1 P...	[more]
EWS_HUMAN	1.159e-22	39.07	RNA-binding protein EWS OS=Homo sapiens GN=EWSR1 P...	[more]
RBP56_HUMAN	1.514e-22	40.88	TATA-binding protein-associated factor 2N OS=Homo ...	[more]
CAZ_DROME	1.417e-20	37.50	RNA-binding protein cabeza OS=Drosophila melanogas...	[more]
FUS_MOUSE	2.672e-19	39.26	RNA-binding protein FUS OS=Mus musculus GN=Fus PE=...	[more]
FUS_HUMAN	2.672e-19	39.26	RNA-binding protein FUS OS=Homo sapiens GN=FUS PE=...	[more]
FUS_BOVIN	2.672e-19	39.26	RNA-binding protein FUS OS=Bos taurus GN=FUS PE=2 ...	[more]
ZRAB2_CHICK	1.855e-12	37.08	Zinc finger Ran-binding domain-containing protein ...	[more]
ZRAB2_RAT	9.206e-12	35.96	Zinc finger Ran-binding domain-containing protein ...	[more]
ZRAB2_PONAB	9.206e-12	35.96	Zinc finger Ran-binding domain-containing protein ...	[more]

BLAST of HO067521 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TM21_SOYBN	6.571e-76	72.25	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9S3N2_RICCO	1.327e-68	64.40	RNA binding protein, putative OS=Ricinus communis ...	[more]
D7TAD5_VITVI	1.123e-67	64.14	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HY23_POPTR	9.510e-67	65.10	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HI59_POPTR	5.770e-64	63.54	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9AST1_ARATH	2.424e-62	62.69	At1g50300/F14I3_23 OS=Arabidopsis thaliana GN=TAF1...	[more]
D7KFY0_ARALY	8.622e-60	58.88	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q69TN3_ORYSJ	1.798e-57	58.76	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8BEA5_ORYSI	1.798e-57	58.76	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q6YS82_ORYSJ	6.831e-57	57.36	Os07g0296200 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of HO067521 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G50300.1	1.867e-64	62.69	\| Symbols: TAF15 \| TBP-associated factor 15 \| chr1...	[more]
AT5G58470.2	2.098e-7	51.02	\| Symbols: TAF15b \| TBP-associated factor 15B \| ch...	[more]
AT5G58470.1	2.098e-7	51.02	\| Symbols: TAF15b \| TBP-associated factor 15B \| ch...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..51 score: 7.1
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 109..138 score: 8.9
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	no description	coord: 110..136 score: 3.9e-05coord: 176..194 score:
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 112..133 score
IPR001876	Zinc finger, RanBP2-type	PROFILE	PS50199	ZF_RANBP2_2	coord: 108..139 score: 9
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 8..64 score: 1.5
None	No IPR available	GENE3D	4.10.1060.10	no description	coord: 103..140 score: 1.1e-13coord: 171..194 score: 2.1
None	No IPR available	PANTHER	PTHR12999	FAMILY NOT NAMED	coord: 4..194 score: 1.5e
None	No IPR available	PANTHER	PTHR12999:SF1	gb def: At1g50300/F14I3_23 (TAF15)	coord: 4..194 score: 1.5e
None	No IPR available	SEG	seg	seg	coord: 136..164 score
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 8..78 score: 1.5
None	No IPR available	SUPERFAMILY	90209	Ran BP2/NZF zinc finger-like	coord: 98..142 score: 4.8e-11coord: 164..194 score: 3.9
None	No IPR available	SEG	seg	seg	coord: 10..29 score: NAcoord: 37..52 score
None	No IPR available	SEG	seg	seg	coord: 12..34 score: NAcoord: 63..76 score
None	No IPR available	SEG	seg	seg	coord: 36..51 score
None	No IPR available	SEG	seg	seg	coord: 31..59 score: NAcoord: 95..113 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067521 ID=HO067521; Name=HO067521; organism=Cicer arietinum; type=EST; length=582bp
CGGGCAGGTACAGGGAGACCTAAAATATGGTTATACCGAGACAAAGAGAC
TGATGAACCAAAGGGAGATGCTACTGTAACATATGAGGATCCGCATGCTG
CTGTGGCTGCTGTTGAATGGTTTAACAACAAGGATTTTCATGGCAATACA
ATTGGAGTTTATATAGCGGAGTCAAAAAACAAGGACGACCAAACATATAA
TCCAGTAGTTGAGCCGGGTGTTGCTGATAATGTTGTTGGACCGGAGGAAA
CTGAAGGTGATGCTAATGGTGTTAGTGGAAGAGGTAGAGGGCTGATTGAT
GCTTCTGGCAAACCACGGCAACAAGAGGGCGATTGGTTGTGTCCGAATAC
AAGTTGCTCCAATGTGAATTTCGCTTTTCGTGGTGCGTGTAATCGCTGTG
GAACTGCTCGCCCAGCTGGTGCTTCTGGTGTTGCAGGAGGAGGTGGCCGT
GGCAGGGGACGTTCTGGACAAGATTCAGGGGGTATTGGCCGTCCAGTTGG
TGCAACTGCAGGACTTTTTGGTCCCAATGACTGGCCGTGTCCAATGTGTG
GCAACATCAATTGGGCAAAGCGGTTAAAATGC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0000166	nucleotide binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR001876	Znf_RanBP2
IPR012677	Nucleotide-bd_a/b_plait_sf

Search form