HO664197

EST Overview


Name	HO664197
Unique Name	HO664197
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	174

Libraries


Library Name	Type
LIBEST_026619 TDZ treated Chickpea SSH library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO664197 vs. TrEMBL
Match: B9GL62_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_709180 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.092e-15
Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISN+SI+TLLAGVKRLLESVNE LT KDVYL   P
Sbjct:  226 TIMYTSGTTGDPKGVMISNDSIVTLLAGVKRLLESVNEALTSKDVYLSYLP 276

[Close]

BLAST of HO664197 vs. TrEMBL
Match: D7TVF4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019527001 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.420e-15
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISNESI+TL+AGVKRLL+SVNE L EKDV++   P
Sbjct:  226 TIMYTSGTTGDPKGVMISNESIVTLIAGVKRLLQSVNEELNEKDVFISYLP 276

[Close]

BLAST of HO664197 vs. TrEMBL
Match: A5B834_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035299 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.420e-15
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISNESI+TL+AGVKRLL+SVNE L EKDV++   P
Sbjct:  217 TIMYTSGTTGDPKGVMISNESIVTLIAGVKRLLQSVNEELNEKDVFISYLP 267

[Close]

BLAST of HO664197 vs. TrEMBL
Match: B9GXH9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817412 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.079e-15
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGVLISN+SI+TL+AGVKRLLESV E+LT +DVYL   P
Sbjct:  226 TIMYTSGTTGDPKGVLISNDSIVTLIAGVKRLLESVKESLTSEDVYLSYLP 276

[Close]

BLAST of HO664197 vs. TrEMBL
Match: B9RCS3_RICCO (Acyl CoA synthetase, putative OS=Ricinus communis GN=RCOM_1691890 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.208e-14
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISN+SI+T++AGV+RLLESVNE LT +DVYL   P
Sbjct:  185 TIMYTSGTTGDPKGVMISNDSIVTIIAGVRRLLESVNEQLTSEDVYLSYLP 235

[Close]

BLAST of HO664197 vs. TrEMBL
Match: B3TZ27_RICCO (Long-chain acyl-CoA synthetase 4 OS=Ricinus communis GN=LACS4 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.208e-14
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISN+SI+T++AGV+RLLESVNE LT +DVYL   P
Sbjct:  229 TIMYTSGTTGDPKGVMISNDSIVTIIAGVRRLLESVNEQLTSEDVYLSYLP 279

[Close]

BLAST of HO664197 vs. TrEMBL
Match: A9PJY3_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.208e-14
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTG PKGV+ISN+SI+TLLAGVKRLLESVNE LT KDVYL   P
Sbjct:  226 TIMYTSGTTGYPKGVMISNDSIVTLLAGVKRLLESVNEALTSKDVYLSYLP 276

[Close]

BLAST of HO664197 vs. TrEMBL
Match: A1X859_RICCO (ACS1 (Fragment) OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.208e-14
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISN+SI+T++AGV+RLLESVNE LT +DVYL   P
Sbjct:  220 TIMYTSGTTGDPKGVMISNDSIVTIIAGVRRLLESVNEQLTSEDVYLSYLP 270

[Close]

BLAST of HO664197 vs. TrEMBL
Match: Q2I824_GOSHI (ACS-like protein OS=Gossypium hirsutum GN=ACS1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.513e-14
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV ISN+SI+TL+AGVKRLL SVNE LT KDVY+   P
Sbjct:  226 TIMYTSGTTGDPKGVFISNDSIVTLIAGVKRLLGSVNEQLTMKDVYISYLP 276

[Close]

BLAST of HO664197 vs. TrEMBL
Match: Q9T0A0_ARATH (AT4g23850/T32A16_20 OS=Arabidopsis thaliana GN=AT4g23850 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.022e-13
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISNESI+TL+AGV RLL+S NE LT KDVYL   P
Sbjct:  227 TIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANEALTVKDVYLSYLP 277

[Close]

BLAST of HO664197 vs. TAIR peptide
Match: AT4G23850.1 (| Symbols: LACS4 | AMP-dependent synthetase and ligase family protein | chr4:12403720-12408263 REVERSE LENGTH=666)

HSP 1 Score: 79.7221 bits (195), Expect = 4.038e-16
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISNESI+TL+AGV RLL+S NE LT KDVYL   P
Sbjct:  227 TIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANEALTVKDVYLSYLP 277

[Close]

BLAST of HO664197 vs. TAIR peptide
Match: AT1G64400.1 (| Symbols: LACS3 | AMP-dependent synthetase and ligase family protein | chr1:23915802-23919681 REVERSE LENGTH=665)

HSP 1 Score: 76.6406 bits (187), Expect = 3.418e-15
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGVL++NESII LL GVK+LL++++E LT KDVYL   P
Sbjct:  227 TIMYTSGTTGDPKGVLLTNESIIHLLEGVKKLLKTIDEELTSKDVYLSYLP 277

[Close]

BLAST of HO664197 vs. TAIR peptide
Match: AT4G11030.1 (| Symbols: | AMP-dependent synthetase and ligase family protein | chr4:6738120-6742229 FORWARD LENGTH=666)

HSP 1 Score: 72.0182 bits (175), Expect = 8.420e-14
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGTTGDPKGV+ISNESI+T+  GV   L +VN +L+EKDVY+   P
Sbjct:  227 TIMYTSGTTGDPKGVMISNESIVTITTGVMHFLGNVNASLSEKDVYISYLP 277

[Close]

BLAST of HO664197 vs. TAIR peptide
Match: AT2G47240.2 (| Symbols: LACS1 | AMP-dependent synthetase and ligase family protein | chr2:19393835-19397616 FORWARD LENGTH=660)

HSP 1 Score: 53.9138 bits (128), Expect = 2.373e-8
Identity = 22/51 (43.14%), Postives = 36/51 (70.59%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGT+GDPKGV+++++++ T + G+   ++   + +T  DVYL   P
Sbjct:  224 TIMYTSGTSGDPKGVVLTHQAVATFVVGMDLYMDQFEDKMTHDDVYLSFLP 274

[Close]

BLAST of HO664197 vs. TAIR peptide
Match: AT2G47240.1 (| Symbols: CER8, LACS1 | AMP-dependent synthetase and ligase family protein | chr2:19393835-19397616 FORWARD LENGTH=660)

HSP 1 Score: 53.9138 bits (128), Expect = 2.373e-8
Identity = 22/51 (43.14%), Postives = 36/51 (70.59%), Query Frame = 2

Query:   20 TIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNENLTEKDVYLPGRP 172
            TIMYTSGT+GDPKGV+++++++ T + G+   ++   + +T  DVYL   P
Sbjct:  224 TIMYTSGTSGDPKGVVLTHQAVATFVVGMDLYMDQFEDKMTHDDVYLSFLP 274

The following BLAST results are available for this feature:

BLAST of HO664197 vs. TrEMBL
BLAST of HO664197 vs. TAIR peptide

BLAST of HO664197 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9GL62_POPTR	1.092e-15	84.31	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TVF4_VITVI	5.420e-15	78.43	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5B834_VITVI	5.420e-15	78.43	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9GXH9_POPTR	7.079e-15	80.39	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RCS3_RICCO	1.208e-14	76.47	Acyl CoA synthetase, putative OS=Ricinus communis ...	[more]
B3TZ27_RICCO	1.208e-14	76.47	Long-chain acyl-CoA synthetase 4 OS=Ricinus commun...	[more]
A9PJY3_9ROSI	1.208e-14	82.35	Putative uncharacterized protein OS=Populus tricho...	[more]
A1X859_RICCO	1.208e-14	76.47	ACS1 (Fragment) OS=Ricinus communis PE=2 SV=1	[more]
Q2I824_GOSHI	3.513e-14	78.43	ACS-like protein OS=Gossypium hirsutum GN=ACS1 PE=...	[more]
Q9T0A0_ARATH	1.022e-13	78.43	AT4g23850/T32A16_20 OS=Arabidopsis thaliana GN=AT4...	[more]

BLAST of HO664197 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G23850.1	4.038e-16	78.43	\| Symbols: LACS4 \| AMP-dependent synthetase and li...	[more]
AT1G64400.1	3.418e-15	72.55	\| Symbols: LACS3 \| AMP-dependent synthetase and li...	[more]
AT4G11030.1	8.420e-14	66.67	\| Symbols: \| AMP-dependent synthetase and ligase ...	[more]
AT2G47240.2	2.373e-8	43.14	\| Symbols: LACS1 \| AMP-dependent synthetase and li...	[more]
AT2G47240.1	2.373e-8	43.14	\| Symbols: CER8, LACS1 \| AMP-dependent synthetase ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 7..40 score: 6
IPR020845	AMP-binding, conserved site	PROSITE	PS00455	AMP_BINDING	coord: 8..19 score
None	No IPR available	GENE3D	3.40.50.980	no description	coord: 7..53 score: 1.3
None	No IPR available	PANTHER	PTHR11968	ATP-DEPENDENT AMP-BINDING ENZYME FAMILY MEMBER	coord: 7..53 score: 3.2
None	No IPR available	PANTHER	PTHR11968:SF8	LONG-CHAIN-FATTY-ACID COA LIGASE	coord: 7..53 score: 3.2
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 7..53 score: 3.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO664197 ID=HO664197; Name=HO664197; organism=Cicer arietinum; type=EST; length=174bp
GCGTGGTCGCGGCCGAGGTACAATAATGTATACTAGTGGAACTACTGGTG
ACCCCAAGGGAGTATTGATATCCAATGAGAGTATCATTACCCTCTTAGCT
GGGGTTAAGCGGCTGTTGGAGAGTGTCAATGAAAATTTGACAGAGAAGGA
TGTGTACCTGCCCGGGCGGCCGCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR000873	AMP-dep_Synth/Lig_com
IPR020845	AMP-binding_CS

Search form