GR406349

EST Overview


Name	GR406349
Unique Name	GR406349
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	345

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR406349 vs. SwissProt
Match: K0090_XENLA (Uncharacterized protein KIAA0090 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.840e-9
Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            I ++  I  +RGI T P+ LEST LV AYG+DL+ T++ PSK +D L +D+ Y               +T  L++ K L   WR
Sbjct:  904 INYNQTISRMRGIYTAPSGLESTCLVVAYGLDLYQTRVYPSKQFDVLKDDYDYILISSVLIGLVFATMITKRLAQVKLLNRAWR 987

[Close]

BLAST of GR406349 vs. SwissProt
Match: K0090_PONAB (Uncharacterized protein KIAA0090 homolog OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.098e-9
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            I ++  +  +RGI T P+ LEST LV AYG+D++ T++ PSK +D L +D+ Y               +T  L++ K L   WR
Sbjct:  913 INYNQTVSRMRGIYTAPSGLESTCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR 996

[Close]

BLAST of GR406349 vs. SwissProt
Match: K0090_MOUSE (Uncharacterized protein KIAA0090 OS=Mus musculus GN=Kiaa0090 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.098e-9
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            I ++  +  +RGI T P+ LEST LV AYG+D++ T++ PSK +D L +D+ Y               +T  L++ K L   WR
Sbjct:  914 INYNQTVSRMRGIYTAPSGLESTCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR 997

[Close]

BLAST of GR406349 vs. SwissProt
Match: K0090_HUMAN (Uncharacterized protein KIAA0090 OS=Homo sapiens GN=KIAA0090 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.098e-9
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            I ++  +  +RGI T P+ LEST LV AYG+D++ T++ PSK +D L +D+ Y               +T  L++ K L   WR
Sbjct:  910 INYNQTVSRMRGIYTAPSGLESTCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR 993

[Close]

BLAST of GR406349 vs. SwissProt
Match: K0090_CHICK (Uncharacterized protein KIAA0090 homolog OS=Gallus gallus GN=RCJMB04_8i12 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 6.990e-9
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            I ++  +  +RGI T P+ LEST LV AYG+D++ T++ PSK +D L +D+ Y               +T  L++ K L   WR
Sbjct:  900 INYNQTVSQIRGIYTSPSGLESTCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR 983

[Close]

BLAST of GR406349 vs. TrEMBL
Match: D7SUC3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035648001 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.784e-27
Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +TH+LK+EGLRGIVT PAKLEST+LVFAYGVDLFFT+IAPS+TYD LT+DFSY              FVTW+LSERK+LQEKWR
Sbjct:  904 VTHNLKVEGLRGIVTAPAKLESTTLVFAYGVDLFFTRIAPSRTYDLLTDDFSYALLLITIVALVAAIFVTWILSERKELQEKWR 987

[Close]

BLAST of GR406349 vs. TrEMBL
Match: B9RS37_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_0802660 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.381e-26
Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +TH+L++EGLRGI+TVPAKLEST+LVFAYGVDLFFT+IAPS+TYDSLTEDFSY              F TW+LSE+K+L++KWR
Sbjct:  900 VTHALQVEGLRGIITVPAKLESTTLVFAYGVDLFFTRIAPSRTYDSLTEDFSYALLLLTIVALVVAIFATWILSEKKELRDKWR 983

[Close]

BLAST of GR406349 vs. TrEMBL
Match: B9H906_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_802390 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.356e-26
Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THS K+EGLRGIVTVPAKLES +LVF YGVDLFFT++APS+TYDSLTEDFSY              FVTWVLSE+KDL +KWR
Sbjct:  902 VTHSHKVEGLRGIVTVPAKLESNTLVFTYGVDLFFTRLAPSRTYDSLTEDFSYALLLITIVALVVAIFVTWVLSEKKDLSDKWR 985

[Close]

BLAST of GR406349 vs. TrEMBL
Match: Q9LYD6_ARATH (Putative uncharacterized protein F15N18_150 OS=Arabidopsis thaliana GN=F15N18_150 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.580e-25
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THS K+EGLRGIVT P+KLEST+ VFAYGVDLF+T++APSKTYDSLT+DFSY              ++TWVLSE+K+L EKWR
Sbjct:  872 VTHSHKVEGLRGIVTAPSKLESTTHVFAYGVDLFYTRLAPSKTYDSLTDDFSYALLLITIVALVAAIYITWVLSEKKELSEKWR 955

[Close]

BLAST of GR406349 vs. TrEMBL
Match: D7M3R9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487993 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.580e-25
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THS K+EGLRGIVT P+KLEST+ VFAYGVDLF+T++APSKTYDSLT+DFSY              ++TWVLSE+K+L EKWR
Sbjct:  899 VTHSHKVEGLRGIVTAPSKLESTTHVFAYGVDLFYTRLAPSKTYDSLTDDFSYALLLITIVALVAAIYITWVLSEKKELSEKWR 982

[Close]

BLAST of GR406349 vs. TrEMBL
Match: Q75GB3_ORYSJ (Os05g0230600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0042F15.2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.095e-23
Identity = 49/84 (58.33%), Postives = 66/84 (78.57%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THSL++E LRGIV++P+KLEST+LVF YGVDLF+TQ+APS+TYDSLT++FSY               VTW+ SE+K+L++KWR
Sbjct:  906 LTHSLQVEALRGIVSIPSKLESTTLVFTYGVDLFYTQLAPSRTYDSLTDEFSYALLLITIAALVAAIVVTWIWSEKKELRDKWR 989

[Close]

BLAST of GR406349 vs. TrEMBL
Match: B9FNC6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_17698 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.095e-23
Identity = 49/84 (58.33%), Postives = 66/84 (78.57%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THSL++E LRGIV++P+KLEST+LVF YGVDLF+TQ+APS+TYDSLT++FSY               VTW+ SE+K+L++KWR
Sbjct:  867 LTHSLQVEALRGIVSIPSKLESTTLVFTYGVDLFYTQLAPSRTYDSLTDEFSYALLLITIAALVAAIVVTWIWSEKKELRDKWR 950

[Close]

BLAST of GR406349 vs. TrEMBL
Match: B8AZP1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19058 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.095e-23
Identity = 49/84 (58.33%), Postives = 66/84 (78.57%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THSL++E LRGIV++P+KLEST+LVF YGVDLF+TQ+APS+TYDSLT++FSY               VTW+ SE+K+L++KWR
Sbjct:  953 LTHSLQVEALRGIVSIPSKLESTTLVFTYGVDLFYTQLAPSRTYDSLTDEFSYALLLITIAALVAAIVVTWIWSEKKELRDKWR 1036

[Close]

BLAST of GR406349 vs. TrEMBL
Match: A9SFI2_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_184382 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.581e-22
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THS ++EGLRG++T+PA+LESTSLVFAYG+DLF+T  APSK YDSLTEDFSY               VT+VLSER++L EKW+
Sbjct:  915 LTHSYQVEGLRGLLTIPARLESTSLVFAYGLDLFYTHTAPSKIYDSLTEDFSYALLLVTIVVLFLSIIVTYVLSERRELAEKWK 998

[Close]

BLAST of GR406349 vs. TrEMBL
Match: C5YV63_SORBI (Putative uncharacterized protein Sb09g007880 OS=Sorghum bicolor GN=Sb09g007880 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.521e-22
Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THS ++E LRGIV++PAKLEST+LVF YGVDLF+TQ+APS+TYDSLT++FSY                TW+ SE+K+L++KWR
Sbjct:  906 VTHSHQVEALRGIVSIPAKLESTTLVFTYGVDLFYTQLAPSRTYDSLTDEFSYALLLITIAVLVGAIIATWIWSEKKELRDKWR 989

[Close]

BLAST of GR406349 vs. TAIR peptide
Match: AT5G11560.1 (| Symbols: | catalytics | chr5:3709734-3713994 REVERSE LENGTH=982)

HSP 1 Score: 116.701 bits (291), Expect = 2.935e-27
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1

Query:    1 ITHSLKIEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSKTYDSLTEDFSYXXXXXXXXXXXXXXFVTWVLSERKDLQEKWR 252
            +THS K+EGLRGIVT P+KLEST+ VFAYGVDLF+T++APSKTYDSLT+DFSY              ++TWVLSE+K+L EKWR
Sbjct:  899 VTHSHKVEGLRGIVTAPSKLESTTHVFAYGVDLFYTRLAPSKTYDSLTDDFSYALLLITIVALVAAIYITWVLSEKKELSEKWR 982

The following BLAST results are available for this feature:

BLAST of GR406349 vs. SwissProt
BLAST of GR406349 vs. TrEMBL
BLAST of GR406349 vs. TAIR peptide

BLAST of GR406349 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
K0090_XENLA	1.840e-9	38.10	Uncharacterized protein KIAA0090 homolog OS=Xenopu...	[more]
K0090_PONAB	4.098e-9	35.71	Uncharacterized protein KIAA0090 homolog OS=Pongo ...	[more]
K0090_MOUSE	4.098e-9	35.71	Uncharacterized protein KIAA0090 OS=Mus musculus G...	[more]
K0090_HUMAN	4.098e-9	35.71	Uncharacterized protein KIAA0090 OS=Homo sapiens G...	[more]
K0090_CHICK	6.990e-9	35.71	Uncharacterized protein KIAA0090 homolog OS=Gallus...	[more]

BLAST of GR406349 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7SUC3_VITVI	2.784e-27	70.24	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RS37_RICCO	1.381e-26	66.67	Catalytic, putative OS=Ricinus communis GN=RCOM_08...	[more]
B9H906_POPTR	2.356e-26	69.05	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9LYD6_ARATH	7.580e-25	64.29	Putative uncharacterized protein F15N18_150 OS=Ara...	[more]
D7M3R9_ARALY	7.580e-25	64.29	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q75GB3_ORYSJ	7.095e-23	58.33	Os05g0230600 protein OS=Oryza sativa subsp. japoni...	[more]
B9FNC6_ORYSJ	7.095e-23	58.33	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AZP1_ORYSI	7.095e-23	58.33	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A9SFI2_PHYPA	1.581e-22	60.71	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
C5YV63_SORBI	3.521e-22	57.14	Putative uncharacterized protein Sb09g007880 OS=So...	[more]

BLAST of GR406349 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G11560.1	2.935e-27	64.29	\| Symbols: \| catalytics \| chr5:3709734-3713994 RE...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011678	Domain of unknown function DUF1620	PFAM	PF07774	DUF1620	coord: 1..83 score: 1.6
None	No IPR available	PANTHER	PTHR21573	UNCHARACTERIZED	coord: 1..84 score: 2.2
None	No IPR available	SEG	seg	seg	coord: 54..67 score
None	No IPR available	SEG	seg	seg	coord: 5..17 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406349 ID=GR406349; Name=GR406349; organism=Cicer arietinum; type=EST; length=345bp
ATTACACATTCCCTAAAAATAGAAGGTCTCCGAGGGATTGTAACAGTACC
TGCCAAATTGGAGTCTACATCCCTCGTCTTTGCATATGGAGTAGATCTAT
TTTTTACTCAGATTGCTCCTTCTAAAACTTACGATTCACTGACTGAAGAT
TTCAGCTATGCTCTACTTCTTCTAACAATTGTTGCACTTGTAGCAGCATT
GTTTGTTACTTGGGTATTATCGGAGAGGAAAGATCTACAAGAGAAATGGA
GATGATCTGTCATCCATTTGTGCTCCATAATTTCTTTAATTTTGAAGGAT
TAAGTAGGTCTTAGTTTTGTTTTTATTTATTAGTTCATTTCGACG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR011678	EMC1_C

Search form