GR406554

EST Overview
NameGR406554
Unique NameGR406554
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length318
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR406554 vs. TrEMBL
Match: B9H9L1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_802113 PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.966e-8
Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 3
Query:  117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311
            MN+L              PD HHVI+MS+  A STGG VNLDKFF+DVE +KD+LKELE ++  +
Sbjct:    1 MNDLFSGSFSRFHSEEASPD-HHVIQMSE--AQSTGGGVNLDKFFEDVESIKDELKELERLNENM 62          
BLAST of GR406554 vs. TrEMBL
Match: Q84PF2_GOSHE (Putative syntaxin (Fragment) OS=Gossypium herbaceum PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.471e-8
Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 3
Query:  117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311
            MNNL              PD HHVIEM  T ++ST G VNLDKFF+DVE +KD+LKELE +++ L
Sbjct:    1 MNNLFSGSFSRFRSEEASPD-HHVIEM--TQSSSTSGGVNLDKFFEDVESIKDELKELERLNHDL 62          
BLAST of GR406554 vs. TrEMBL
Match: Q84PF0_GOSBA (Putative syntaxin (Fragment) OS=Gossypium barbadense PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.471e-8
Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 3
Query:  117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311
            MNNL              PD HHVIEM  T ++ST G VNLDKFF+DVE +KD+LKELE +++ L
Sbjct:    1 MNNLFSGSFSRFRSEEASPD-HHVIEM--TQSSSTSGGVNLDKFFEDVESIKDELKELERLNHDL 62          
BLAST of GR406554 vs. TrEMBL
Match: Q84PE9_GOSBA (Putative syntaxin (Fragment) OS=Gossypium barbadense PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.471e-8
Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 3
Query:  117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311
            MNNL              PD HHVIEM  T ++ST G VNLDKFF+DVE +KD+LKELE +++ L
Sbjct:    1 MNNLFSGSFSRFRSEEASPD-HHVIEM--TQSSSTSGGVNLDKFFEDVESIKDELKELERLNDDL 62          
BLAST of GR406554 vs. TrEMBL
Match: Q84PE8_9ROSI (Putative syntaxin (Fragment) OS=Gossypioides kirkii PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.219e-7
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 3
Query:  117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311
            MNNL              PD HHVIEM  T ++ T G VNLDKFF+DVE +KD+LKELE +++ L
Sbjct:    1 MNNLFSGSFSRFRSEEASPD-HHVIEM--TQSSPTSGGVNLDKFFEDVESIKDELKELERLNDDL 62          
BLAST of GR406554 vs. TrEMBL
Match: B9SDJ9_RICCO (Syntaxin, putative OS=Ricinus communis GN=RCOM_0420140 PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.171e-7
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 3
Query:  117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRLE 314
            MN+L              PD HHVI+M++T   STGG VNLDKFF+DVE VKD+LKELE ++  L+
Sbjct:    1 MNDLFSGSFSRFRNEQGSPD-HHVIQMTETP--STGG-VNLDKFFEDVESVKDELKELERLNESLQ 62          
BLAST of GR406554 vs. TrEMBL
Match: C6TD47_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.366e-7
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 3
Query:  171 PDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311
            PD HHVIEM+ T + +  G VNL+KFF +VE VK++LKELE +   L
Sbjct:   18 PDHHHVIEMAATASPTAEGSVNLEKFFQEVEQVKEELKELERLHENL 64          
The following BLAST results are available for this feature:
BLAST of GR406554 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9H9L1_POPTR4.966e-850.77Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q84PF2_GOSHE8.471e-852.31Putative syntaxin (Fragment) OS=Gossypium herbaceu... [more]
Q84PF0_GOSBA8.471e-852.31Putative syntaxin (Fragment) OS=Gossypium barbaden... [more]
Q84PE9_GOSBA8.471e-852.31Putative syntaxin (Fragment) OS=Gossypium barbaden... [more]
Q84PE8_9ROSI3.219e-750.77Putative syntaxin (Fragment) OS=Gossypioides kirki... [more]
B9SDJ9_RICCO7.171e-751.52Syntaxin, putative OS=Ricinus communis GN=RCOM_042... [more]
C6TD47_SOYBN9.366e-755.32Putative uncharacterized protein OS=Glycine max PE... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 14..73
score: 7.7
NoneNo IPR availablePANTHERPTHR19957:SF26SYNTAXIN, ARABIDOPSIS THALIANAcoord: 14..73
score: 7.7
NoneNo IPR availableSEGsegsegcoord: 12..25
score
NoneNo IPR availableSEGsegsegcoord: 2..26
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR406554 ID=GR406554; Name=GR406554; organism=Cicer arietinum; type=EST; length=318bp
GATTCTCACTAATACTACTTAATTCCAACCAATTACTCTCTCTTTTATCT
TCTTCCCTTTCTTAATCATATTTTTGGATCATTATTGAATTTTGAATTGA
ATCTAAAAAACAAAAAATGAACAACTTATTCTCCGGCTCATTCTCTCGCT
TCCGAAGCGAAGAAACCTCACCGGATCGCCACCACGTCATCGAGATGTCC
GACACCGGAGCTAACTCAACCGGAGGAAGAGTCAACCTCGACAAATTCTT
CGACGACGTAGAGGGCGTAAAAGACGATCTAAAAGAACTCGAAGGAATTT
CTAACCGACTCGAAAAAA
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