GR406554
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR406554 vs. TrEMBL
Match: B9H9L1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_802113 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.966e-8 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311 MN+L PD HHVI+MS+ A STGG VNLDKFF+DVE +KD+LKELE ++ + Sbjct: 1 MNDLFSGSFSRFHSEEASPD-HHVIQMSE--AQSTGGGVNLDKFFEDVESIKDELKELERLNENM 62
BLAST of GR406554 vs. TrEMBL
Match: Q84PF2_GOSHE (Putative syntaxin (Fragment) OS=Gossypium herbaceum PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.471e-8 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311 MNNL PD HHVIEM T ++ST G VNLDKFF+DVE +KD+LKELE +++ L Sbjct: 1 MNNLFSGSFSRFRSEEASPD-HHVIEM--TQSSSTSGGVNLDKFFEDVESIKDELKELERLNHDL 62
BLAST of GR406554 vs. TrEMBL
Match: Q84PF0_GOSBA (Putative syntaxin (Fragment) OS=Gossypium barbadense PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.471e-8 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311 MNNL PD HHVIEM T ++ST G VNLDKFF+DVE +KD+LKELE +++ L Sbjct: 1 MNNLFSGSFSRFRSEEASPD-HHVIEM--TQSSSTSGGVNLDKFFEDVESIKDELKELERLNHDL 62
BLAST of GR406554 vs. TrEMBL
Match: Q84PE9_GOSBA (Putative syntaxin (Fragment) OS=Gossypium barbadense PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.471e-8 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311 MNNL PD HHVIEM T ++ST G VNLDKFF+DVE +KD+LKELE +++ L Sbjct: 1 MNNLFSGSFSRFRSEEASPD-HHVIEM--TQSSSTSGGVNLDKFFEDVESIKDELKELERLNDDL 62
BLAST of GR406554 vs. TrEMBL
Match: Q84PE8_9ROSI (Putative syntaxin (Fragment) OS=Gossypioides kirkii PE=4 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.219e-7 Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 3 Query: 117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311 MNNL PD HHVIEM T ++ T G VNLDKFF+DVE +KD+LKELE +++ L Sbjct: 1 MNNLFSGSFSRFRSEEASPD-HHVIEM--TQSSPTSGGVNLDKFFEDVESIKDELKELERLNDDL 62
BLAST of GR406554 vs. TrEMBL
Match: B9SDJ9_RICCO (Syntaxin, putative OS=Ricinus communis GN=RCOM_0420140 PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.171e-7 Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 3 Query: 117 MNNLXXXXXXXXXXXXXXPDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRLE 314 MN+L PD HHVI+M++T STGG VNLDKFF+DVE VKD+LKELE ++ L+ Sbjct: 1 MNDLFSGSFSRFRNEQGSPD-HHVIQMTETP--STGG-VNLDKFFEDVESVKDELKELERLNESLQ 62
BLAST of GR406554 vs. TrEMBL
Match: C6TD47_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.366e-7 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 3 Query: 171 PDRHHVIEMSDTGANSTGGRVNLDKFFDDVEGVKDDLKELEGISNRL 311 PD HHVIEM+ T + + G VNL+KFF +VE VK++LKELE + L Sbjct: 18 PDHHHVIEMAATASPTAEGSVNLEKFFQEVEQVKEELKELERLHENL 64 The following BLAST results are available for this feature:
BLAST of GR406554 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR406554 ID=GR406554; Name=GR406554; organism=Cicer arietinum; type=EST; length=318bpback to top |