GR408116
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR408116 vs. TrEMBL
Match: B9H5E4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_206604 PE=4 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.245e-45 Identity = 102/192 (53.12%), Postives = 139/192 (72.40%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNP-PSLFSAAEPE--IQAPYRDEN-FDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGS-AADLLDELCCNESLASEYMEMLRYDV 652 D ++SQVLHS +N LL G S+QTG S + LRNMLQQ TQ+PQ+MNTV+QIAQQV SQD+GNM +G+ GQGGG+D S M++QMMP+VS+ L +P P LF EPE +Q+ R+ N +N ++Q +L VA+RI++ P DVF+A+ NA +L+G+GS A D+L EL NE LAS+Y+EML+ D+ Sbjct: 718 DTASVVSQVLHSPVINNLLTGVSEQTGVGSPNVLRNMLQQLTQNPQIMNTVSQIAQQVDSQDLGNMFSGLGSGQGGGIDLSGMVRQMMPVVSQVLVRGSPTPQLFPTPEPEPQMQSNERESNGAENPNIQINLHEVAQRIEQFDAPQDVFQAIVGNAARLNGNGSNAEDILHELNNNEDLASDYVEMLQRDI 909
BLAST of GR408116 vs. TrEMBL
Match: B9R8J0_RICCO (Scythe/bat3, putative OS=Ricinus communis GN=RCOM_1600180 PE=4 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.831e-44 Identity = 98/194 (50.52%), Postives = 133/194 (68.56%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNPPSLFSAAEPEIQAPYR----DENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGS-GSAADLLDELCCNESLASEYMEMLRYDVSE 658 D +MSQV+ S ALNGLL G S+QTG S + LRNMLQQ TQ PQ+M+TV+QIAQQV QD+GNM +G+ GQG G+D SRM+QQMMP+VS+ LG EPE Q +EN D ++Q DLQ VA+RI + + P D+FRA+AENA +L+G+ S+ +++ EL NE L ++Y+EML+ D+ + Sbjct: 737 DTASIMSQVIRSPALNGLLAGVSEQTGVGSPNVLRNMLQQLTQDPQLMSTVSQIAQQVEGQDLGNMFSGLGSGQGSGIDLSRMMQQMMPVVSQVLGRGPTAQPSPHVEPESQYSESRLDGNENPDGRNVQIDLQEVAQRIGQCNAPGDMFRAIAENAARLTGNESSSQEIVHELSNNEDLVNDYIEMLQLDLHQ 930
BLAST of GR408116 vs. TrEMBL
Match: B9GQ45_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_550805 PE=4 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.864e-43 Identity = 99/195 (50.77%), Postives = 136/195 (69.74%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNP-PSLFSA--AEPEIQAPYRD----ENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGS-AADLLDELCCNESLASEYMEMLRYDV 652 D MSQVL S +N L G S+QTG S + RNMLQQ TQ+PQ+MNTV+QIAQQV QD+GNM +G+ GQGGG D S M+QQMMP+VS+ LG +P P LF +EP++++ R+ EN ++ ++Q +L VA+RI++ + P DVF+A+ NAV+L+G+GS A D+ EL NE LAS Y+EML+ D+ Sbjct: 743 DSASAMSQVLRSPVMNNLFAGVSEQTGVGSPNVFRNMLQQLTQNPQIMNTVSQIAQQVDGQDLGNMFSGLGSGQGGGFDLSGMVQQMMPVVSQVLGHGSPTPQLFPTPESEPQMRSNERESIGAENPNDNNIQINLHEVAQRIEQFAAPQDVFQAIVGNAVRLNGNGSNAEDIQHELNNNEDLASNYVEMLQRDI 937
BLAST of GR408116 vs. TrEMBL
Match: Q9FH07_ARATH (Genomic DNA, chromosome 5, TAC clone:K5J14 OS=Arabidopsis thaliana GN=At5g42220 PE=4 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.206e-40 Identity = 93/187 (49.73%), Postives = 125/187 (66.84%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNPPSLFSAAEPEIQAPYRDENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGSAADLLDELCCNESLASEYMEMLRYDV 652 DV MSQVL S L+GLL G S+Q G DS + LRNMLQQFTQ+PQ+MNTV QIAQQV Q++ NM++G +G+GGG DFSRM+QQMMP+VSRA P + +P+ + P Q ++Q +A+ I+ PP DVFRA+ ENA + S +L++ELCC+E+L+ EY E+LR D+ Sbjct: 721 DVSSAMSQVLESPVLDGLLAGVSRQAGVDSPNMLRNMLQQFTQNPQIMNTVQQIAQQVDGQEIENMMSGGAQGEGGGFDFSRMVQQMMPLVSRAFSQGGPLPHPATIQPDDRQP----------SQVNVQSMAQMIEHSDPPEDVFRAMVENA-----AISQDELVNELCCDEALSQEYAELLRRDI 892
BLAST of GR408116 vs. TrEMBL
Match: Q8L745_ARATH (AT5g42220/K5J14_2 OS=Arabidopsis thaliana GN=At5g42220 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.206e-40 Identity = 93/187 (49.73%), Postives = 125/187 (66.84%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNPPSLFSAAEPEIQAPYRDENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGSAADLLDELCCNESLASEYMEMLRYDV 652 DV MSQVL S L+GLL G S+Q G DS + LRNMLQQFTQ+PQ+MNTV QIAQQV Q++ NM++G +G+GGG DFSRM+QQMMP+VSRA P + +P+ + P Q ++Q +A+ I+ PP DVFRA+ ENA + S +L++ELCC+E+L+ EY E+LR D+ Sbjct: 698 DVSSAMSQVLESPVLDGLLAGVSRQAGVDSPNMLRNMLQQFTQNPQIMNTVQQIAQQVDGQEIENMMSGGAQGEGGGFDFSRMVQQMMPLVSRAFSQGGPLPHPATIQPDDRQP----------SQVNVQSMAQMIEHSDPPEDVFRAMVENA-----AISQDELVNELCCDEALSQEYAELLRRDI 869
BLAST of GR408116 vs. TrEMBL
Match: D7SRR6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_54.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029432001 PE=4 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.508e-40 Identity = 99/191 (51.83%), Postives = 131/191 (68.59%), Query Frame = 2 Query: 104 LMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRAL-GGVNPPSLFS--AAEPEIQ----APYRDENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGSAAD-LLDELCCNESLASEYMEMLRYDV 652 ++ QV + G +G ++Q+GA S D L NMLQQ +Q+P MMNTVNQIAQQV Q++ +M +G+ RGQGGG+D SRM+QQMMPIVSRAL G N LF +EP+ Q P R + D + Q DL+ VAE I+R PP D+FR+VAENAVQL +G+ + LLD LC +E LA+E+ME+L+ DV Sbjct: 745 VLGQVREGMSSGG--QGLAEQSGAGSPDVLSNMLQQLSQNPLMMNTVNQIAQQVDGQELESMFSGLGRGQGGGIDLSRMVQQMMPIVSRALSSGPNRGELFHGVGSEPQPQHSERRPSRGDKPDVQNSQTDLREVAESIERQIPPQDIFRSVAENAVQLYANGTGPEGLLDVLCSDEHLATEFMEVLQRDV 933
BLAST of GR408116 vs. TrEMBL
Match: D7MTI3_ARALY (Ubiquitin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494809 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.741e-39 Identity = 93/189 (49.21%), Postives = 123/189 (65.08%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNPPSLFSAAEPEIQAPYRDENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGSAADLLDELCCNESLASEYMEMLRYDVSE 658 DV +SQVL S AL+GLL G S+Q G DS + LRNMLQQ TQSPQ+MNTV QIAQQV Q++ NM++G +G+GGG DFSRM+QQMMP+VSRA P + +P+ D + Q ++Q +A+ I+ PP DVFRA+ ENA + S DL++ELC +E L EY E+LR D+ + Sbjct: 698 DVSSAVSQVLESPALDGLLAGVSRQAGVDSPNMLRNMLQQLTQSPQIMNTVQQIAQQVDGQEIENMMSGGSQGEGGGFDFSRMVQQMMPLVSRAFSQGGPSPHPTTLQPD----------DRQTSQVNVQSMAQMIEHSDPPEDVFRAMVENA-----AISQDDLVNELCRDEVLCHEYAELLRRDIED 871
BLAST of GR408116 vs. TrEMBL
Match: D5AEH7_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.608e-27 Identity = 78/208 (37.50%), Postives = 117/208 (56.25%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVG--SQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVN-------PPSLFSAAEPEIQAP------YRDENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQL-------SGSGSAADLLDELCCNESLASEYMEMLRYD 649 DVG +MSQ+L + +N + G ++QTG L N+++Q T+SP + NT+ ++ +Q+G +D+ NML+GM G G DFSR+LQQMMPIVS+ LG + P S A AP D+NF Q DL+P ++++ PP +VFR++ EN + L S +++L++L ESLASEY+ ML D Sbjct: 277 DVGEIMSQLLRTPTMNNFISGMTEQTGTAPPGALSNVMEQVTRSPALRNTMQRMTEQLGEHGEDIDNMLSGM-GGSQDGFDFSRVLQQMMPIVSQVLGSASGGASSGPAPEAQSRASNAGHAPSTEGSRVADQNF-----QIDLEPTIQKLENHDPPQEVFRSMVENTMALYAADADTSNGADTSEMLNQLPNTESLASEYIAMLNRD 478
BLAST of GR408116 vs. TrEMBL
Match: Q84VB9_ORYSJ (Putative uncharacterized protein (Fragment) OS=Oryza sativa subsp. japonica PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.339e-23 Identity = 71/195 (36.41%), Postives = 107/195 (54.87%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNP-PSLFSAAEPEIQAPYRDENFDNLS----LQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSG-SAADLLDELCCNESLASEYMEMLRYDVSE 658 D G ++S VL++ A LL ++QTG S+ LRNM+++ QSP +M+T++ + Q V G RGQ GG+D SRM+QQMMP+VS+ LGG P+ ++ + +Q D D+ S Q DL E I++ P D+F AV E A Q G S D+L+EL + L +Y+++L V + Sbjct: 147 DFGSMISSVLNNPAFGNLLSNVAEQTGMGSAGDLRNMVEECAQSPAIMDTMSNLVQNV---------DGSGRGQ-GGIDLSRMMQQMMPVVSQVLGGAGARPAGTNSGQSRLQPRRSDMRVDDASDYGNSQIDLHQAREHIEQHDSPRDIFGAVLETAAQAYGEDESIEDMLEELVSDPELTDDYLKLLLQQVRQ 331
BLAST of GR408116 vs. TrEMBL
Match: Q84UT7_ORYSA (Calreticulin interacted protein OS=Oryza sativa GN=CRTintP PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.339e-23 Identity = 71/195 (36.41%), Postives = 107/195 (54.87%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNP-PSLFSAAEPEIQAPYRDENFDNLS----LQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSG-SAADLLDELCCNESLASEYMEMLRYDVSE 658 D G ++S VL++ A LL ++QTG S+ LRNM+++ QSP +M+T++ + Q V G RGQ GG+D SRM+QQMMP+VS+ LGG P+ ++ + +Q D D+ S Q DL E I++ P D+F AV E A Q G S D+L+EL + L +Y+++L V + Sbjct: 770 DFGSMISSVLNNPAFGNLLSNVAEQTGMGSAGDLRNMVEECAQSPAIMDTMSNLVQNV---------DGSGRGQ-GGIDLSRMMQQMMPVVSQVLGGAGARPAGTNSGQSRLQPRRSDMRVDDASDYGNSQIDLHQAREHIEQHDSPRDIFGAVLETAAQAYGEDESIEDMLEELVSDPELTDDYLKLLLQQVRQ 954
BLAST of GR408116 vs. TAIR peptide
Match: AT5G42220.1 (| Symbols: | Ubiquitin-like superfamily protein | chr5:16872962-16877455 FORWARD LENGTH=879) HSP 1 Score: 170.244 bits (430), Expect = 8.548e-43 Identity = 93/187 (49.73%), Postives = 125/187 (66.84%), Query Frame = 2 Query: 92 DVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNPPSLFSAAEPEIQAPYRDENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGSAADLLDELCCNESLASEYMEMLRYDV 652 DV MSQVL S L+GLL G S+Q G DS + LRNMLQQFTQ+PQ+MNTV QIAQQV Q++ NM++G +G+GGG DFSRM+QQMMP+VSRA P + +P+ + P Q ++Q +A+ I+ PP DVFRA+ ENA + S +L++ELCC+E+L+ EY E+LR D+ Sbjct: 698 DVSSAMSQVLESPVLDGLLAGVSRQAGVDSPNMLRNMLQQFTQNPQIMNTVQQIAQQVDGQEIENMMSGGAQGEGGGFDFSRMVQQMMPLVSRAFSQGGPLPHPATIQPDDRQP----------SQVNVQSMAQMIEHSDPPEDVFRAMVENA-----AISQDELVNELCCDEALSQEYAELLRRDI 869 The following BLAST results are available for this feature:
BLAST of GR408116 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR408116 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR408116 ID=GR408116; Name=GR408116; organism=Cicer arietinum; type=EST; length=659bpback to top |