GR420604

EST Overview
NameGR420604
Unique NameGR420604
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length370
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR420604 vs. TrEMBL
Match: C4JBA4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.142e-11
Identity = 58/114 (50.88%), Postives = 64/114 (56.14%), Query Frame = -1
Query:   38 FPSRYLFAIGLSPIFSLGRNLLHSPPDWG---KQPDS-TAPRGAPTGSEHSHPLRRPTGLPGD-LGPRSAVGLGRFSNNSNAGDR*VSRFAHGGLIAVTKGC*FLILSSAY*YA 364
            FPSRYLFAIGLSP+FSLGR+L   PPD G   KQPDS TAPRGA TGS     L  P G+P      RS         NS       S +A  G +AVT+G      SSAY YA
Sbjct:  104 FPSRYLFAIGLSPVFSLGRSL---PPDLGCIPKQPDSLTAPRGA-TGSGPDGALTLP-GVPFQRTWARSVAEDASPDYNSGGEAARFSSWAAPGSLAVTRGILVSFFSSAYLYA 212          
BLAST of GR420604 vs. TrEMBL
Match: C6JS48_SORBI (Putative uncharacterized protein Sb0057s002150 (Fragment) OS=Sorghum bicolor GN=Sb0057s002150 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.093e-10
Identity = 57/114 (50.00%), Postives = 66/114 (57.89%), Query Frame = -1
Query:   38 PSRYLFAIGLSPIFSLGRNLLHSPPDWG---KQPDS-TAPRGAPTGSEHSHPLRRPTGLPGDLGPRSAVGLGRFSNNSNAGDR*V--SRFAHGGLIAVTKGC*FLILSSAY*YA 361
            PSRYLFAIGLSP+FSLGR+L   PPD G   KQPDS TAPRGA  GS     L  P G+P   G  +       S + N+GD     S +A  G +AVT+G      SSAY YA
Sbjct:    1 PSRYLFAIGLSPVFSLGRSL---PPDLGCIPKQPDSLTAPRGA-AGSGPDGALTLP-GVPFQ-GTWARSVAEDASPDYNSGDEATRFSSWAGPGSLAVTRGILVSFFSSAYLYA 108          
BLAST of GR420604 vs. TrEMBL
Match: A5BKB8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001840 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.541e-9
Identity = 44/91 (48.35%), Postives = 44/91 (48.35%), Query Frame = 3
Query:   96 SPP*ANRETYRSPAFELLEKRPSPTADRGPKSPGSPVGRRRG*ECSDPVGAPRGAV-ESGCLPQSGGECSKFRPRLNIGERPIANKYREGK 365
            SP      T R P         S  ADR          R R   C DPV APRGAV ESGC         KFRPRLN GERPIANK REGK
Sbjct:  246 SPQGPPTRTARDPRSRPQSGEASSAADRAQVPXKGAPERVRAPSCPDPV-APRGAVGESGCXGMQXQSGGKFRPRLNTGERPIANKCREGK 335          
The following BLAST results are available for this feature:
BLAST of GR420604 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
C4JBA4_MAIZE2.142e-1150.88Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C6JS48_SORBI3.093e-1050.00Putative uncharacterized protein Sb0057s002150 (Fr... [more]
A5BKB8_VITVI1.541e-948.35Putative uncharacterized protein OS=Vitis vinifera... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420604 ID=GR420604; Name=GR420604; organism=Cicer arietinum; type=EST; length=370bp
AGGTCAGGCGGTGAATTTAAGCAGACCTCGGGCTACCCGCATATCAATAA
GCGGAGGAAAGGATTAGAAACTAACAACCCTTAGTAACGGCGATAAGCCC
ACCATGAGCGAACCGGGAGACTTATCGGTCGCCGGCGTTCGAATTGTTGG
AGAAGCGTCCTAGTCCAACGGCGGACCGGGGGCCCAAGTCCCCTGGAAGC
CCCGTTGGGCGCCGGAGAGGGTGAGAGTGCTCGGACCCTGTCGGCGCACC
ACGAGGCGCTGTCGAGTCGGGTTGTTTGCCCCAATCGGGCGGGGAATGCA
GTAAATTCCGTCCAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAG
TACCGCGAGGGAAAAAAAAG
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