GR912123

EST Overview
NameGR912123
Unique NameGR912123
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length427
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
KEGG analysis for Cicer arietinum unigene v12011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR912123 vs. TrEMBL
Match: Q2PEU1_TRIPR (Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.310e-52
Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = -1
Query:   20 QEKCQTTLXXXXXXXXXXXXXSNPPVPVKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 427
            QEKC +TL              +P VPVKFS+DTERLQ INSIRKAPVGAQMKRVI +L+ETRQALTL+QINE  +VDMKANKDVFD+MRKNPKVR+DGERFSYKSKH+LRDKKELLFLIRKFPEGIAVIDLKDSY
Sbjct:   14 QEKCASTLSSIAASKAASSAVPSPLVPVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGERFSYKSKHSLRDKKELLFLIRKFPEGIAVIDLKDSY 149          
BLAST of GR912123 vs. TrEMBL
Match: C6TE63_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.206e-47
Identity = 90/112 (80.36%), Postives = 106/112 (94.64%), Query Frame = -1
Query:   20 PVPVKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 355
            P P+KFS+DTERLQ +NSIRKAPVGAQMKRVI +L+ETR+ALT++QINEA YVDM+ANKDVF+SMRKNPKV++DGERFSYKSKH +RDK +LLFL+RKFPEGIAV+DLKDSY
Sbjct:   27 PAPIKFSNDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTIEQINEACYVDMRANKDVFESMRKNPKVKYDGERFSYKSKHDVRDKNQLLFLVRKFPEGIAVVDLKDSY 138          
BLAST of GR912123 vs. TrEMBL
Match: C6TCR2_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.106e-42
Identity = 95/145 (65.52%), Postives = 108/145 (74.48%), Query Frame = -1
Query:   20 QEKCQTTLXXXXXXXXXXXXXS---------NPPVPVKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 427
            QEKCQTTL             S         N    VKFS+DTERLQ INSIRKAPVGAQMKRVI +L ETRQA T +QIN A YVDMKANKDVF+++RKNPKV +DG+RFSYKSK+ L+DK ELL LIRK+PEG+AVIDLKD+Y
Sbjct:   14 QEKCQTTLSSIAASKAAATQKSAAHGSANGRNAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINGACYVDMKANKDVFENLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAY 158          
BLAST of GR912123 vs. TrEMBL
Match: D7TW30_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019802001 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.629e-41
Identity = 93/147 (63.27%), Postives = 106/147 (72.11%), Query Frame = -1
Query:   20 QEKCQTTLXXXXXXXXXXXXXS----------NPPVP-VKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 427
            QEKCQ+TL                         PP P VKFS+DTERLQ INSIRKAPVGAQ+KRVI +L ETRQA T +QINEA YVD  ANK VFDS+R NPKV +DG+RF+YKSKH L+D+ +LL L+RKFPEGIAVIDLKDSY
Sbjct:   14 QEKCQSTLTSIAAKAGSSKPTVPQKFTPAAPTKPPTPAVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSYDGKRFAYKSKHDLKDRSQLLVLVRKFPEGIAVIDLKDSY 160          
BLAST of GR912123 vs. TrEMBL
Match: B7FIV7_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.434e-41
Identity = 91/149 (61.07%), Postives = 108/149 (72.48%), Query Frame = -1
Query:   20 QEKCQTTLXXXXXXXXXXXXXSNPPVP-------------VKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 427
            QEKCQ+TL             + P V              VKFSSDTERLQ IN+IRKAPVGAQMKRVI +L ETRQA T +QINEA YVDM+ANKDVF S+RKNPKV +DG+RFSYK+K+ L++K ELL LIR++PEG+AV DLKD+Y
Sbjct:   14 QEKCQSTLSSIASSKVGSRKPNTPVVATNASANGRNSRTGVKFSSDTERLQQINNIRKAPVGAQMKRVIDLLLETRQAFTPEQINEACYVDMRANKDVFGSLRKNPKVEYDGQRFSYKAKYGLKEKSELLQLIRRYPEGLAVFDLKDAY 162          
BLAST of GR912123 vs. TrEMBL
Match: B9RC71_RICCO (Transcription initiation factor IIE subunit beta, putative OS=Ricinus communis GN=RCOM_1686000 PE=4 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.305e-40
Identity = 90/149 (60.40%), Postives = 106/149 (71.14%), Query Frame = -1
Query:   20 QEKCQTTLXXXXXXXXXXXXXSNPPV-------------PVKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 427
            QEKCQTTL               P +              VKFS+DTERLQ I+SIRKAPVGAQ+KRVI +L+ETRQA T +QINEA YVD+ +NK VFDS+R NPKV +DG  FSYKSKH L+DKK+LL+LIR+F EGIAVIDLKD+Y
Sbjct:   14 QEKCQTTLTSIAAKAGSHKPSITPKIVAPSPIIPRTPGPAVKFSNDTERLQHIHSIRKAPVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRHFSYKSKHDLKDKKQLLYLIREFKEGIAVIDLKDAY 162          
BLAST of GR912123 vs. TrEMBL
Match: D7SPJ4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019026001 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.907e-40
Identity = 93/143 (65.03%), Postives = 103/143 (72.03%), Query Frame = -1
Query:   32 QEKCQTTLXXXXXXXXXXXXXS----------NPPVP-VKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDL 427
            QEKCQ+TL                         PP P VKFS+DTERLQ INSIRKAPVGAQ+KRVI +L ETRQA T +QINEA YVDM ANK VFDS+R NPKV +DG+RFSYKSKH L+DK +LL LIRKFPEGIAVIDL
Sbjct:   14 QEKCQSTLTSIAAKAVSSKPSVPQNFTPAAPTKPPTPAVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDMTANKAVFDSLRNNPKVNYDGKRFSYKSKHDLKDKSQLLVLIRKFPEGIAVIDL 156          
BLAST of GR912123 vs. TrEMBL
Match: B9GKK9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640520 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.475e-40
Identity = 84/113 (74.34%), Postives = 95/113 (84.07%), Query Frame = -1
Query:   20 PPVPVKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 358
            P   VKFS+DTERLQ INSIRKAP GAQ+KRVI +L ETRQA T +QIN+  YVDM +NK VFDS+R NPKV +DG+RFSYKSKH L+DK +LL LIRKFPEGIAVIDLKDSY
Sbjct:   52 PAPAVKFSNDTERLQHINSIRKAPAGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNNPKVHYDGKRFSYKSKHDLKDKSQLLVLIRKFPEGIAVIDLKDSY 164          
BLAST of GR912123 vs. TrEMBL
Match: A2Z6Y8_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33458 PE=4 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.159e-39
Identity = 74/113 (65.49%), Postives = 95/113 (84.07%), Query Frame = -1
Query:   20 PPVPVKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 358
            PP P+KFS+DTERLQ INS+RK+P+GAQ+K VI +LY+TRQA T +QINE  YVD+  NK VFDS+R NPKV +DG RFSYKSKH L+ K +LL L+RK+PEG+AV+++KD+Y
Sbjct:   47 PPQPIKFSNDTERLQHINSVRKSPIGAQIKLVIELLYKTRQAFTAEQINETTYVDIHGNKSVFDSLRNNPKVHYDGRRFSYKSKHDLKGKDQLLVLVRKYPEGLAVVEVKDAY 159          
BLAST of GR912123 vs. TrEMBL
Match: B4FCN7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 9.351e-39
Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = -1
Query:   20 PPVPVKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 358
            P  P+KFS+DTERLQ INSIRK+PVGAQ+K VI +LY+TRQA T +QINEA YVD+  NK VFDS+R NPKV +DG RFSYKSKH L+ K +LL LIRKFPEG+AV+++KD+Y
Sbjct:   47 PSQPIKFSNDTERLQHINSIRKSPVGAQIKLVIELLYKTRQAFTAEQINEATYVDIHGNKAVFDSLRNNPKVSYDGRRFSYKSKHDLKGKDQLLVLIRKFPEGLAVVEVKDAY 159          
BLAST of GR912123 vs. TAIR peptide
Match: AT4G20330.1 (| Symbols: | Transcription initiation factor TFIIE, beta subunit | chr4:10982683-10984039 REVERSE LENGTH=286)

HSP 1 Score: 155.221 bits (391), Expect = 1.226e-38
Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = -1
Query:   20 PVKFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 349
            PVKFSSDTERLQ IN+IRKAPVGAQ+KRVI +LYE R ALT +QINE  +VDM ANK VFDS+RKNPK  +DG RFSYK+ H + DK +LL L+RK+ +GIAV+DLKD+Y
Sbjct:   53 PVKFSSDTERLQNINNIRKAPVGAQIKRVIDLLYERRLALTPEQINEWCHVDMHANKAVFDSLRKNPKAHYDGRRFSYKATHDVNDKNQLLSLVRKYLDGIAVVDLKDAY 162          
BLAST of GR912123 vs. TAIR peptide
Match: AT4G21010.1 (| Symbols: | Transcription initiation factor TFIIE, beta subunit | chr4:11226317-11227363 REVERSE LENGTH=275)

HSP 1 Score: 129.413 bits (324), Expect = 7.204e-31
Identity = 72/145 (49.66%), Postives = 91/145 (62.76%), Query Frame = -1
Query:   20 QEKCQTTLXXXXXXXXXXXXXSNPPVPV---------KFSSDTERLQVINSIRKAPVGAQMKRVIAILYETRQALTLDQINEARYVDMKANKDVFDSMRKNPKVRFDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSY 427
            QEKCQ+TL               P             KFS +T++LQ I +IR + VGAQMK VI +L++TR A T +QINEA YVDM  NK VFDS+RKNPKV +DG RFSYK+ H ++DKK+LL  + K  + I V DLKD+Y
Sbjct:   14 QEKCQSTLSSISSSRTALSRSYVPAATTSQKPNVFRGKFSENTKQLQHITNIRNSAVGAQMKIVIDLLFKTRLAYTAEQINEACYVDMHNNKAVFDSLRKNPKVHYDGRRFSYKATHNIKDKKQLLSFVNKSDKVIDVSDLKDAY 158          
The following BLAST results are available for this feature:
BLAST of GR912123 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2PEU1_TRIPR3.310e-5277.94Putative uncharacterized protein OS=Trifolium prat... [more]
C6TE63_SOYBN3.206e-4780.36Putative uncharacterized protein OS=Glycine max PE... [more]
C6TCR2_SOYBN3.106e-4265.52Putative uncharacterized protein (Fragment) OS=Gly... [more]
D7TW30_VITVI2.629e-4163.27Whole genome shotgun sequence of line PN40024, sca... [more]
B7FIV7_MEDTR3.434e-4161.07Putative uncharacterized protein (Fragment) OS=Med... [more]
B9RC71_RICCO1.305e-4060.40Transcription initiation factor IIE subunit beta, ... [more]
D7SPJ4_VITVI2.907e-4065.03Whole genome shotgun sequence of line PN40024, sca... [more]
B9GKK9_POPTR6.475e-4074.34Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A2Z6Y8_ORYSI7.159e-3965.49Putative uncharacterized protein OS=Oryza sativa s... [more]
B4FCN7_MAIZE9.351e-3969.03Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GR912123 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G20330.11.226e-3870.00| Symbols: | Transcription initiation factor TFII... [more]
AT4G21010.17.204e-3149.66| Symbols: | Transcription initiation factor TFII... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003166Transcription factor TFIIE beta subunit, DNA-binding domainPROFILEPS51351TFIIE_BETA_Ccoord: 36..111
score: 10
NoneNo IPR availablePANTHERPTHR12716TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNITcoord: 14..136
score: 3.3
NoneNo IPR availablePANTHERPTHR12716:SF8GENERAL TRANSCRIPTION FACTOR II Ecoord: 14..136
score: 3.3
NoneNo IPR availableSEGsegsegcoord: 9..22
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR912123 ID=GR912123; Name=GR912123; organism=Cicer arietinum; type=EST; length=427bp
TGAGCGGCCGCCCGGGCAGGTACGAATCCTTTAGGTCAATAACAGCAATG
CCCTCTGGAAATTTGCGTATCAGGAAAAGCAGCTCTTTTTTGTCCCTAAG
GGCATGTTTCGACTTGTAAGAGAATCTTTCTCCATCAAATCTTACTTTTG
GATTTTTCCTCATACTGTCAAAAACATCTTTGTTAGCTTTCATGTCCACA
TAGCGTGCTTCATTTATTTGATCCAACGTTAAAGCCTGCCGAGTCTCATA
AAGGATAGCAATAACACGCTTCATTTGAGCTCCAACAGGTGCTTTGCGTA
TACTGTTAATGACTTGAAGTCTCTCCGTATCAGATGAGAATTTGACAGGA
ACAGGGGGGTTTGACGCAGATACAGATGAAGCCTTGCTCGCTGCTATGCT
CGATAGTGTTGTTTGACATTTCTCTTG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003702obsolete RNA polymerase II transcription factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005673transcription factor TFIIE complex
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation at RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR003166TFIIE_bsu_DNA-bd