HO062404

EST Overview
NameHO062404
Unique NameHO062404
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length396
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of HO062404 vs. SwissProt
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.260e-15
Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = -2
Query:  174 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLI 389
            EVG V HNY DNG+SMS+ETRLLIE EVK LL++AYNNAKTILT                ETL+G QIK+L+
Sbjct:  584 EVGLVAHNYDDNGKSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELL 655          
BLAST of HO062404 vs. SwissProt
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.952e-15
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = -2
Query:  132 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLIEKGEYQPQQPSHKV 389
            ++G V++NY D+G+SMS+ETRLLIE+EVK+LL+ AYNNAKTILT                ETLTG+QIK ++ +     QQ  H V
Sbjct:  580 QLGFVSYNYEDDGKSMSTETRLLIEQEVKSLLENAYNNAKTILTKHSKEHHVLAQALLEHETLTGAQIKKILAQANSTQQQQEHAV 665          
BLAST of HO062404 vs. SwissProt
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.989e-12
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = -2
Query:  147 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLIEKGEYQPQQ 389
            ++G V++NY D+G+SMS+ETRLLIEKEVK  ++ AYNNAK IL                 ETLTG+QIK+++ +   + QQ
Sbjct:  587 QLGFVSYNYEDDGKSMSTETRLLIEKEVKCFVENAYNNAKNILIKHNKELHALANALLEHETLTGAQIKNILAQVNNKQQQ 667          
BLAST of HO062404 vs. TrEMBL
Match: Q6KC90_PEA (FtsH-like protease OS=Pisum sativum GN=ftsh4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.371e-24
Identity = 60/87 (68.97%), Postives = 65/87 (74.71%), Query Frame = -2
Query:  132 TEVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLIEKGEYQPQQPSHKV 392
            TEVGPVTHNYYDNGRSMSSETRLLIEKEVKNLL+RAYNNAKTILTT               ETLTGSQI +L+ K + Q QQP  +V
Sbjct:  582 TEVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLERAYNNAKTILTTHEKELHALANALLEQETLTGSQINELLAKVKSQKQQPQSRV 668          
BLAST of HO062404 vs. TrEMBL
Match: B9RRQ8_RICCO (Protein YME1, putative OS=Ricinus communis GN=RCOM_0797270 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.406e-17
Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = -2
Query:  147 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLIEKGEYQPQQ 389
            EVG VTHNY DNG+SMS+ETRLLIE+EVKN L++AYNNAKTILTT               ETLTGSQIK L+ +   Q QQ
Sbjct:  581 EVGVVTHNYDDNGKSMSTETRLLIEQEVKNFLEKAYNNAKTILTTHSKELHALANALLEHETLTGSQIKALLAQVNSQQQQ 661          
BLAST of HO062404 vs. TrEMBL
Match: Q84LQ3_SOLLC (Putative FtsH protease OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.294e-16
Identity = 51/86 (59.30%), Postives = 58/86 (67.44%), Query Frame = -2
Query:  135 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLI-EKGEYQPQQPSHK 389
            EVG VTHNY DNG+SMS+ETRLLIEKEV+ LL+RAYNNAKTILTT               ETLTG QIK L+ +    Q QQ  H+
Sbjct:  582 EVGLVTHNYDDNGKSMSTETRLLIEKEVRELLERAYNNAKTILTTHNKELHALANALLEKETLTGGQIKALLAQVKSQQTQQKQHQ 667          
BLAST of HO062404 vs. TrEMBL
Match: D7STQ6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035393001 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.766e-16
Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = -2
Query:  147 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLI-EKGEYQPQQ 389
            EVG VTHNY DNG+SMS+ETRLLIEKEVK+ L++AYNNAKTILTT               ETLTG+QIK L+ +    QP Q
Sbjct:  603 EVGVVTHNYDDNGKSMSTETRLLIEKEVKHFLEKAYNNAKTILTTHSKELHALANALLEHETLTGNQIKALLAQVNSQQPHQ 684          
BLAST of HO062404 vs. TrEMBL
Match: B9HDE2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1081399 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.424e-16
Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = -2
Query:  135 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLIEK--GEYQPQQPSHK 389
            EVG VTHNY DNG+SMS+ETRLLIEKEVK  L+RAYNNAK ILTT               ETL+GSQIK L+ +   + Q QQP  +
Sbjct:  589 EVGVVTHNYDDNGKSMSTETRLLIEKEVKYFLERAYNNAKKILTTNSKELHALANALLEQETLSGSQIKALLAQVNSQQQRQQPQQQ 675          
BLAST of HO062404 vs. TrEMBL
Match: D7LCQ9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481469 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.604e-14
Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = -2
Query:  174 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLI 389
            EVG V HNY DNG+SMS+ETRLLIE EVK LL++AYNNAKTILT                ETL+G QIK+L+
Sbjct:  584 EVGLVAHNYDDNGKSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELL 655          
BLAST of HO062404 vs. TrEMBL
Match: A2WRN7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02522 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.013e-14
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = -2
Query:  132 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLIEKGEYQPQQPSHKV 389
            ++G V++NY D+G+SMS+ETRLLIE+EVK+LL+ AYNNAKTILT                ETLTG+QIK ++ +     QQ  H V
Sbjct:  580 QLGFVSYNYEDDGKSMSTETRLLIEQEVKSLLENAYNNAKTILTKHSKEHHVLAQALLEHETLTGAQIKKILAQANSTQQQQEHAV 665          
BLAST of HO062404 vs. TrEMBL
Match: D0VEB2_TOBAC (FtsH protease (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.682e-13
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = -2
Query:  255 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTT 389
            EVG VTHNY DNG+SMS+ETRLLIEKEV+ LL+RAYNNAKTILT+
Sbjct:   33 EVGLVTHNYDDNGKSMSTETRLLIEKEVRELLERAYNNAKTILTS 77          
BLAST of HO062404 vs. TrEMBL
Match: C0P4W8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.134e-12
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = -2
Query:  132 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLIEKGEYQPQQPSHKV 389
            +VG V++NY D+G+SMSSETRL IE+EVKN L+ AY+NAKTILT                ETLTG+QIK+++ +  +  QQ  H +
Sbjct:  580 QVGLVSYNYEDDGKSMSSETRLAIEQEVKNFLENAYSNAKTILTKHNKELHALANALLEHETLTGAQIKNILAQ-VHNKQQHEHTI 664          
BLAST of HO062404 vs. TrEMBL
Match: C5XNS5_SORBI (Putative uncharacterized protein Sb03g025820 OS=Sorghum bicolor GN=Sb03g025820 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.481e-12
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = -2
Query:  132 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLIEKGEYQPQQPSHKV 389
            +VG V++NY D+G+S+SSETRL+IE+EVKN L+ AYNNAKTILT                ETLTG+QI +++ +  +  QQ  H +
Sbjct:  580 QVGLVSYNYEDDGKSLSSETRLVIEQEVKNFLENAYNNAKTILTKHNKELHALANALLEHETLTGAQITNILAQ-VHNKQQQEHTI 664          
BLAST of HO062404 vs. TAIR peptide
Match: AT2G26140.1 (| Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-11135126 REVERSE LENGTH=717)

HSP 1 Score: 80.8777 bits (198), Expect = 2.381e-16
Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = -2
Query:  174 EVGPVTHNYYDNGRSMSSETRLLIEKEVKNLLQRAYNNAKTILTTXXXXXXXXXXXXXXXETLTGSQIKDLI 389
            EVG V HNY DNG+SMS+ETRLLIE EVK LL++AYNNAKTILT                ETL+G QIK+L+
Sbjct:  584 EVGLVAHNYDDNGKSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELL 655          
The following BLAST results are available for this feature:
BLAST of HO062404 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
FTSH4_ARATH2.260e-1559.72Cell division protease ftsH homolog 4, mitochondri... [more]
FTSH4_ORYSJ2.952e-1550.00Cell division protease ftsH homolog 4, mitochondri... [more]
FTSH5_ORYSJ3.989e-1246.91Cell division protease ftsH homolog 5, mitochondri... [more]
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BLAST of HO062404 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q6KC90_PEA8.371e-2468.97FtsH-like protease OS=Pisum sativum GN=ftsh4 PE=2 ... [more]
B9RRQ8_RICCO3.406e-1761.73Protein YME1, putative OS=Ricinus communis GN=RCOM... [more]
Q84LQ3_SOLLC1.294e-1659.30Putative FtsH protease OS=Solanum lycopersicum PE=... [more]
D7STQ6_VITVI3.766e-1659.76Whole genome shotgun sequence of line PN40024, sca... [more]
B9HDE2_POPTR6.424e-1657.47Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LCQ9_ARALY4.604e-1459.72Putative uncharacterized protein OS=Arabidopsis ly... [more]
A2WRN7_ORYSI6.013e-1450.00Putative uncharacterized protein OS=Oryza sativa s... [more]
D0VEB2_TOBAC8.682e-1382.22FtsH protease (Fragment) OS=Nicotiana tabacum PE=2... [more]
C0P4W8_MAIZE1.134e-1248.84Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C5XNS5_SORBI1.481e-1247.67Putative uncharacterized protein Sb03g025820 OS=So... [more]
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BLAST of HO062404 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G26140.12.381e-1659.72| Symbols: ftsh4 | FTSH protease 4 | chr2:11131939... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 7..21
score
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 16..64
score: 3.1
NoneNo IPR availablePANTHERPTHR23076:SF10CELL DIVISION PROTEIN FTSH HOMOLOGcoord: 16..64
score: 3.1
NoneNo IPR availableSEGsegsegcoord: 48..63
score: NAcoord: 89..104
score
NoneNo IPR availableSUPERFAMILY140990FtsH protease domain-likecoord: 3..86
score: 1.5
IPR000642Peptidase M41PFAMPF01434Peptidase_M41coord: 10..73
score: 9

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062404 ID=HO062404; Name=HO062404; organism=Cicer arietinum; type=EST; length=396bp
ACTGTCTGAACATATTGATCCTGTAGTGATGATATAGTAGCATGTATTTC
TAGTCTTCTTAGCAGATGCTACAATGGCTGCGGACTTGCTGCTGCAGTTG
CTGTACTGGACTGTGAACTCTCCTGAGCTTCAACTTTATGTGACGGTTGC
TGCGGTTGGTATTCGCCCTTCTCAATTAAATCCTTTATCTGACTTCCTGT
AAGTGTCTCGTGCTCTAGAAGTGCGTTCGCAAGCGCATGAAGCTCCTTTT
CATGGGTTGTTAGAATAGTTTTTGCATTGTTGTAAGCTCTCTGAAGCAAG
TTCTTCACTTCTTTCTCAATAAGCAACCTAGTCTCTGAGCTCATACTTCT
TCCATTATCATAGTAATTGTGAGTGACAGGTCCAACTTCAGTACCT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR000642Peptidase_M41