HO065359
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO065359 vs. SwissProt
Match: RT31_ARATH (30S ribosomal protein S31, mitochondrial OS=Arabidopsis thaliana GN=At2g21290 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.311e-10 Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = -3 Query: 65 MASSVSVMQRCTVAARSFIRAASTETPCASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 331 M + + QR + A R +S CA+ V+ LC SR K+ +MIERIKDK+E+PRSTPWPLPFKLI Sbjct: 10 MTRRIMMTQRTSAALNCSARYSSLSPACAAPAVSEMDLCGRGDKKTKKGKRFKGSYGNSRGKKQKMIERIKDKLELPRSTPWPLPFKLI 98
BLAST of HO065359 vs. SwissProt
Match: RT31_ORYSJ (30S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica GN=Os09g0528100 PE=3 SV=2) HSP 1 Score: 60.077 bits (144), Expect = 4.217e-9 Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 65 RPKRDQMIERIKDKVEVPRSTPWPLPFKLI 154 RPKR++ IERIKD+VEVPRSTPWPLPFKLI Sbjct: 53 RPKREKKIERIKDRVEVPRSTPWPLPFKLI 82
BLAST of HO065359 vs. TrEMBL
Match: A5AQK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029514 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.343e-11 Identity = 39/88 (44.32%), Postives = 49/88 (55.68%), Query Frame = -3 Query: 65 VSVMQRCTVAARSFIRAA---STETPCASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 319 +++MQ C AAR + ST +SA + PILC +RPK+++ IERIKDKVEVPRS PWPLPFKLI Sbjct: 1 MAMMQWCGAAARRMMTTMTERSTVASSSSAAMGVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIERIKDKVEVPRSXPWPLPFKLI 88
BLAST of HO065359 vs. TrEMBL
Match: B9H0Y3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_556543 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.846e-10 Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = -3 Query: 65 SVMQRCTVAARSFIRAASTETPCASAGVA-TPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 316 +V +R V RS + + S+ET +S+ A P LC +RPK+++ IERIKDKVEVPRSTPWPLPFKLI Sbjct: 10 AVARRGMVGHRSALFSTSSETSVSSSAAAMAPNLCGRGDKKTKRGKRFKGTYGNARPKKEKKIERIKDKVEVPRSTPWPLPFKLI 94
BLAST of HO065359 vs. TrEMBL
Match: B9HRF4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557169 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.410e-10 Identity = 41/88 (46.59%), Postives = 49/88 (55.68%), Query Frame = -3 Query: 65 SVMQRCTVAARSFI---RAASTETPCASAGVA-TPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 316 +VMQ C AR + R+A T S+G PILC +RPK+++ IERIKDKVEVPRSTPWPLPFKLI Sbjct: 3 TVMQWCGAVARRAMAGQRSAVFSTSSISSGAEMAPILCGRGDKKTKRGKRFKGTYGNARPKKEKKIERIKDKVEVPRSTPWPLPFKLI 90
BLAST of HO065359 vs. TrEMBL
Match: B9RHE2_RICCO (30S ribosomal protein S31, mitochondrial, putative OS=Ricinus communis GN=RCOM_1450700 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.148e-10 Identity = 38/85 (44.71%), Postives = 47/85 (55.29%), Query Frame = -3 Query: 65 SVMQRCTVAARSFIRA-ASTETPCASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 316 ++MQ C AR + +S A A P++C SRPK+++MIERIKDKVEVPRSTPWPLPFKLI Sbjct: 3 TMMQWCGAVARRVVATQSSARIGGAVAAEEAPVVCGRGDKRTKKGKRFKGSYGNSRPKKEKMIERIKDKVEVPRSTPWPLPFKLI 87
BLAST of HO065359 vs. TrEMBL
Match: B6UIF3_MAIZE (30S ribosomal protein S31 OS=Zea mays PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 7.754e-9 Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = -3 Query: 65 AARSFIRAASTETP----CASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 292 AA +F+R + P A+A A + C +RPKR++ IERIKD+VEVPRSTPWPLPFKLI Sbjct: 9 AAATFMRRLAPARPPVPILAAASTAEAVTCGRGDKKTKRGKRFKGSYGNARPKREKKIERIKDRVEVPRSTPWPLPFKLI 88
BLAST of HO065359 vs. TrEMBL
Match: C5X658_SORBI (Putative uncharacterized protein Sb02g030670 OS=Sorghum bicolor GN=Sb02g030670 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.947e-8 Identity = 35/82 (42.68%), Postives = 42/82 (51.22%), Query Frame = -3 Query: 65 AARSFIRAASTETP------CASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 292 AA +F+R P AS A + C +RPKR++ IERIKD+VEVPRSTPWPLPFKLI Sbjct: 7 AAAAFVRRLVPARPPVPVLAAASTAEAEAVTCGRGDKKTKRGKRFKGSYGNARPKREKKIERIKDRVEVPRSTPWPLPFKLI 88
BLAST of HO065359 vs. TrEMBL
Match: Q0J066_ORYSJ (Os09g0528100 protein OS=Oryza sativa subsp. japonica GN=Os09g0528100 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.573e-8 Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 65 RPKRDQMIERIKDKVEVPRSTPWPLPFKLI 154 RPKR++ IERIKD+VEVPRSTPWPLPFKLI Sbjct: 53 RPKREKKIERIKDRVEVPRSTPWPLPFKLI 82
BLAST of HO065359 vs. TrEMBL
Match: A7M6H4_MALDO (Putative uncharacterized protein (Fragment) OS=Malus domestica PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.573e-8 Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 65 RPKRDQMIERIKDKVEVPRSTPWPLPFKLI 154 RPK+++ IERIKDKVEVPRSTPWPLPFKLI Sbjct: 20 RPKKEKRIERIKDKVEVPRSTPWPLPFKLI 49
BLAST of HO065359 vs. TrEMBL
Match: A2Z3B9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32120 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.573e-8 Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 65 RPKRDQMIERIKDKVEVPRSTPWPLPFKLI 154 RPKR++ IERIKD+VEVPRSTPWPLPFKLI Sbjct: 53 RPKREKKIERIKDRVEVPRSTPWPLPFKLI 82
BLAST of HO065359 vs. TrEMBL
Match: D5ABS2_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7 Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = -3 Query: 65 TPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 229 TP++C +RPK+D+MI R+K+K+EVP STPWPLPFKLI Sbjct: 63 TPVVCGRGDKKTKKGKRFKGSYGNARPKKDKMISRLKEKIEVPSSTPWPLPFKLI 117
BLAST of HO065359 vs. TAIR peptide
Match: AT2G21290.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9112888-9113184 FORWARD LENGTH=98) HSP 1 Score: 65.0846 bits (157), Expect = 1.449e-11 Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = -3 Query: 65 MASSVSVMQRCTVAARSFIRAASTETPCASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 331 M + + QR + A R +S CA+ V+ LC SR K+ +MIERIKDK+E+PRSTPWPLPFKLI Sbjct: 10 MTRRIMMTQRTSAALNCSARYSSLSPACAAPAVSEMDLCGRGDKKTKKGKRFKGSYGNSRGKKQKMIERIKDKLELPRSTPWPLPFKLI 98 The following BLAST results are available for this feature:
BLAST of HO065359 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 2
BLAST of HO065359 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO065359 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO065359 ID=HO065359; Name=HO065359; organism=Cicer arietinum; type=EST; length=405bpback to top |