HO065359

EST Overview
NameHO065359
Unique NameHO065359
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length405
Libraries
Library NameType
LIBEST_026412 Chickpea drought stressed cDNA SSH library AS1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of HO065359 vs. SwissProt
Match: RT31_ARATH (30S ribosomal protein S31, mitochondrial OS=Arabidopsis thaliana GN=At2g21290 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.311e-10
Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = -3
Query:   65 MASSVSVMQRCTVAARSFIRAASTETPCASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 331
            M   + + QR + A     R +S    CA+  V+   LC                   SR K+ +MIERIKDK+E+PRSTPWPLPFKLI
Sbjct:   10 MTRRIMMTQRTSAALNCSARYSSLSPACAAPAVSEMDLCGRGDKKTKKGKRFKGSYGNSRGKKQKMIERIKDKLELPRSTPWPLPFKLI 98          
BLAST of HO065359 vs. SwissProt
Match: RT31_ORYSJ (30S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica GN=Os09g0528100 PE=3 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 4.217e-9
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = -3
Query:   65 RPKRDQMIERIKDKVEVPRSTPWPLPFKLI 154
            RPKR++ IERIKD+VEVPRSTPWPLPFKLI
Sbjct:   53 RPKREKKIERIKDRVEVPRSTPWPLPFKLI 82          
BLAST of HO065359 vs. TrEMBL
Match: A5AQK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029514 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.343e-11
Identity = 39/88 (44.32%), Postives = 49/88 (55.68%), Query Frame = -3
Query:   65 VSVMQRCTVAARSFIRAA---STETPCASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 319
            +++MQ C  AAR  +      ST    +SA +  PILC                   +RPK+++ IERIKDKVEVPRS PWPLPFKLI
Sbjct:    1 MAMMQWCGAAARRMMTTMTERSTVASSSSAAMGVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIERIKDKVEVPRSXPWPLPFKLI 88          
BLAST of HO065359 vs. TrEMBL
Match: B9H0Y3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_556543 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.846e-10
Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = -3
Query:   65 SVMQRCTVAARSFIRAASTETPCASAGVA-TPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 316
            +V +R  V  RS + + S+ET  +S+  A  P LC                   +RPK+++ IERIKDKVEVPRSTPWPLPFKLI
Sbjct:   10 AVARRGMVGHRSALFSTSSETSVSSSAAAMAPNLCGRGDKKTKRGKRFKGTYGNARPKKEKKIERIKDKVEVPRSTPWPLPFKLI 94          
BLAST of HO065359 vs. TrEMBL
Match: B9HRF4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557169 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.410e-10
Identity = 41/88 (46.59%), Postives = 49/88 (55.68%), Query Frame = -3
Query:   65 SVMQRCTVAARSFI---RAASTETPCASAGVA-TPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 316
            +VMQ C   AR  +   R+A   T   S+G    PILC                   +RPK+++ IERIKDKVEVPRSTPWPLPFKLI
Sbjct:    3 TVMQWCGAVARRAMAGQRSAVFSTSSISSGAEMAPILCGRGDKKTKRGKRFKGTYGNARPKKEKKIERIKDKVEVPRSTPWPLPFKLI 90          
BLAST of HO065359 vs. TrEMBL
Match: B9RHE2_RICCO (30S ribosomal protein S31, mitochondrial, putative OS=Ricinus communis GN=RCOM_1450700 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.148e-10
Identity = 38/85 (44.71%), Postives = 47/85 (55.29%), Query Frame = -3
Query:   65 SVMQRCTVAARSFIRA-ASTETPCASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 316
            ++MQ C   AR  +   +S     A A    P++C                   SRPK+++MIERIKDKVEVPRSTPWPLPFKLI
Sbjct:    3 TMMQWCGAVARRVVATQSSARIGGAVAAEEAPVVCGRGDKRTKKGKRFKGSYGNSRPKKEKMIERIKDKVEVPRSTPWPLPFKLI 87          
BLAST of HO065359 vs. TrEMBL
Match: B6UIF3_MAIZE (30S ribosomal protein S31 OS=Zea mays PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.754e-9
Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = -3
Query:   65 AARSFIRAASTETP----CASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 292
            AA +F+R  +   P     A+A  A  + C                   +RPKR++ IERIKD+VEVPRSTPWPLPFKLI
Sbjct:    9 AAATFMRRLAPARPPVPILAAASTAEAVTCGRGDKKTKRGKRFKGSYGNARPKREKKIERIKDRVEVPRSTPWPLPFKLI 88          
BLAST of HO065359 vs. TrEMBL
Match: C5X658_SORBI (Putative uncharacterized protein Sb02g030670 OS=Sorghum bicolor GN=Sb02g030670 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.947e-8
Identity = 35/82 (42.68%), Postives = 42/82 (51.22%), Query Frame = -3
Query:   65 AARSFIRAASTETP------CASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 292
            AA +F+R      P       AS   A  + C                   +RPKR++ IERIKD+VEVPRSTPWPLPFKLI
Sbjct:    7 AAAAFVRRLVPARPPVPVLAAASTAEAEAVTCGRGDKKTKRGKRFKGSYGNARPKREKKIERIKDRVEVPRSTPWPLPFKLI 88          
BLAST of HO065359 vs. TrEMBL
Match: Q0J066_ORYSJ (Os09g0528100 protein OS=Oryza sativa subsp. japonica GN=Os09g0528100 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.573e-8
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = -3
Query:   65 RPKRDQMIERIKDKVEVPRSTPWPLPFKLI 154
            RPKR++ IERIKD+VEVPRSTPWPLPFKLI
Sbjct:   53 RPKREKKIERIKDRVEVPRSTPWPLPFKLI 82          
BLAST of HO065359 vs. TrEMBL
Match: A7M6H4_MALDO (Putative uncharacterized protein (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.573e-8
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = -3
Query:   65 RPKRDQMIERIKDKVEVPRSTPWPLPFKLI 154
            RPK+++ IERIKDKVEVPRSTPWPLPFKLI
Sbjct:   20 RPKKEKRIERIKDKVEVPRSTPWPLPFKLI 49          
BLAST of HO065359 vs. TrEMBL
Match: A2Z3B9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32120 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.573e-8
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = -3
Query:   65 RPKRDQMIERIKDKVEVPRSTPWPLPFKLI 154
            RPKR++ IERIKD+VEVPRSTPWPLPFKLI
Sbjct:   53 RPKREKKIERIKDRVEVPRSTPWPLPFKLI 82          
BLAST of HO065359 vs. TrEMBL
Match: D5ABS2_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = -3
Query:   65 TPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 229
            TP++C                   +RPK+D+MI R+K+K+EVP STPWPLPFKLI
Sbjct:   63 TPVVCGRGDKKTKKGKRFKGSYGNARPKKDKMISRLKEKIEVPSSTPWPLPFKLI 117          
BLAST of HO065359 vs. TAIR peptide
Match: AT2G21290.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9112888-9113184 FORWARD LENGTH=98)

HSP 1 Score: 65.0846 bits (157), Expect = 1.449e-11
Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = -3
Query:   65 MASSVSVMQRCTVAARSFIRAASTETPCASAGVATPILCXXXXXXXXXXXXXXXXXXXSRPKRDQMIERIKDKVEVPRSTPWPLPFKLI 331
            M   + + QR + A     R +S    CA+  V+   LC                   SR K+ +MIERIKDK+E+PRSTPWPLPFKLI
Sbjct:   10 MTRRIMMTQRTSAALNCSARYSSLSPACAAPAVSEMDLCGRGDKKTKKGKRFKGSYGNSRGKKQKMIERIKDKLELPRSTPWPLPFKLI 98          
The following BLAST results are available for this feature:
BLAST of HO065359 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
RT31_ARATH1.311e-1040.4530S ribosomal protein S31, mitochondrial OS=Arabid... [more]
RT31_ORYSJ4.217e-986.6730S ribosomal protein S31, mitochondrial OS=Oryza ... [more]
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BLAST of HO065359 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5AQK5_VITVI6.343e-1144.32Putative uncharacterized protein OS=Vitis vinifera... [more]
B9H0Y3_POPTR1.846e-1045.88Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HRF4_POPTR2.410e-1046.59Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RHE2_RICCO3.148e-1044.7130S ribosomal protein S31, mitochondrial, putative... [more]
B6UIF3_MAIZE7.754e-943.7530S ribosomal protein S31 OS=Zea mays PE=4 SV=1[more]
C5X658_SORBI2.947e-842.68Putative uncharacterized protein Sb02g030670 OS=So... [more]
Q0J066_ORYSJ8.573e-886.67Os09g0528100 protein OS=Oryza sativa subsp. japoni... [more]
A7M6H4_MALDO8.573e-886.67Putative uncharacterized protein (Fragment) OS=Mal... [more]
A2Z3B9_ORYSI8.573e-886.67Putative uncharacterized protein OS=Oryza sativa s... [more]
D5ABS2_PICSI1.910e-747.27Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of HO065359 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G21290.11.449e-1140.45| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 32..44
score
NoneNo IPR availableSEGsegsegcoord: 50..69
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO065359 ID=HO065359; Name=HO065359; organism=Cicer arietinum; type=EST; length=405bp
TAGCGTGGTCGCGGCCGAGGTACTTTTGGCCGCATAAGAACGCAAATAGA
GTTAAATTGAATCAAATGAGCTTGAAAGGAAGAGGCCAAGGAGTAGACCT
GGGAACTTCTACTTTGTCTTTGATGCGTTCGATCATTTGATCTCTCTTCG
GACGAGATTTTCCGAAAGATCCTTTGAATCTCTTCCCTTTCTTTGTCTTT
TTATCACCACGACCGCACAATATCGGGGTTGCAACGCCGGCTGAAGCACA
CGGCGTCTCCGTCGACGCGGCTCTTATAAAAGACCTCGCAGCTACGGTGC
ACCGCTGCATCACACTCACACTACTCGCCATAAACACTTCTCTTCTCTCT
TCTCGTTTTTGCTACTCGAGCTTTCCCCGCGTACCTGCCCGGGCGGCCGC
TCGAA
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