HO067787

EST Overview


Name	HO067787
Unique Name	HO067787
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	490

Libraries


Library Name	Type
LIBEST_026415 Chickpea drought stressed cDNA SSH library BULK2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of HO067787 vs. TrEMBL
Match: B9RMK2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1081340 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.631e-9
Identity = 34/68 (50.00%), Postives = 39/68 (57.35%), Query Frame = 2

Query:  284 MALNFSHRSIFPGGVSEDNLVSPMRMGNGYRVEXXXXXXXXXXXXXXXXXXXNGWHDVENCFDYGMDR 487
            MALNFSHR++FPG + EDNLV+PMR+ NGY VE                        VENCFDYG DR
Sbjct:    1 MALNFSHRTLFPGHLPEDNLVTPMRLANGYLVE----------------------DKVENCFDYGRDR 46

The following BLAST results are available for this feature:

BLAST of HO067787 vs. TrEMBL

BLAST of HO067787 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
B9RMK2_RICCO	2.631e-9	50.00	Putative uncharacterized protein OS=Ricinus commun...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 3..12 score
None	No IPR available	SEG	seg	seg	coord: 46..64 score
None	No IPR available	SEG	seg	seg	coord: 10..31 score
None	No IPR available	SEG	seg	seg	coord: 7..14 score
None	No IPR available	SEG	seg	seg	coord: 16..36 score
None	No IPR available	SEG	seg	seg	coord: 1..17 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067787 ID=HO067787; Name=HO067787; organism=Cicer arietinum; type=EST; length=490bp
TTCCTTAATTATTATTATAAATTGGTTCTTCATCATCTCAAGAAACTCTG
TGAAGTTTTTGGTGCTTTGTTTTAGTTTGCAATCGGAAATCGAGGGTTTT
CTTGTTAGATCTCTTCCACTTTTCATTTTTTTTCCTGTGTTATTTTCCAC
GTTAGAACCAAAAAGAAAAAAAAATAAGAAAAATCGTTGTTTTGAATAGA
ATCACCCCTGAAAATAAGTAGGGTTTGTGGTTGATTTATTTAGTTAGGGT
TTGTATATATATTGGAAATTGGAAATACATGATATGGCGTTGAATTTCTC
TCATCGATCAATTTTTCCCGGTGGTGTGTCTGAGGATAATTTGGTTTCTC
CGATGAGAATGGGGAATGGATACCGAGTAGAGGGTAGTGGTAGTGGTGAT
GGATTTGGTAGTGGTAGTGGTAGTGGTGATGGATTTAGTAATGGATGGCA
TGATGTTGAGAATTGCTTTGATTATGGAATGGATAGATGT

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