HO664272

EST Overview


Name	HO664272
Unique Name	HO664272
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	724

Libraries


Library Name	Type
LIBEST_026619 TDZ treated Chickpea SSH library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.673e-30
Identity = 59/65 (90.77%), Postives = 64/65 (98.46%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            IPT FDPFAEANAEDSGAGTK+YVH+R+QQRNGRKSLTTVQGLKK++SYNKILKDLKKEFCCNGT
Sbjct:    8 IPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.479e-29
Identity = 59/65 (90.77%), Postives = 64/65 (98.46%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            +PT FDPFA+ANAEDSGAGTKEYVHIR+QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGT
Sbjct:    8 VPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.932e-29
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            +PT FDPFA+ANAEDSGAGTKEYVHIR+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGT
Sbjct:    8 VPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.932e-29
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            +PT FDPFA+ANAEDSGAGTKEYVHIR+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGT
Sbjct:    8 VPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.216e-28
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = -1

Query:   20 IFIPTTFDPFAEANAEDSGA--GTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 220
            I IPT FDPFAEANA DSGA  G+K+YVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT
Sbjct:    6 IQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 74

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.216e-28
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = -1

Query:   20 IFIPTTFDPFAEANAEDSGA--GTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 220
            I IPT FDPFAEANA DSGA  G+K+YVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT
Sbjct:    6 IQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 74

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.385e-27
Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = -1

Query:   20 IFIPTTFDPFAEANAEDSGA--GTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 220
            I IPT FDPF+EANA DSGA  G+K+YVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT
Sbjct:    6 IQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 74

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.362e-27
Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = -1

Query:   20 IFIPTTFDPFAEANAEDSGA--GTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 220
            I IPT FDPFAEANA DSGA  G+K+YVH+RIQQRNGRKSLTTVQGLKKEFSY+KILKDLKKEFCCNGT
Sbjct:    6 IQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGT 74

[Close]

BLAST of HO664272 vs. SwissProt
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.192e-24
Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = -1

Query:   20 IFIPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 220
            I IPT+FDPFAEA   D+   TKEYVHIRIQQRNGRKSLTTVQGLKKE SY+KILKDLKK  CCNGT
Sbjct:    6 IQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGT 72

[Close]

BLAST of HO664272 vs. SwissProt
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.193e-19
Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYG--NPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQAL 583
            +EN++  A+ EM G  C  R +R+G+ATPK      +P      ++   G +S+   V Q +    D+ N+T+FVGGL   +S+E+L+  F  FG++V VKIP GKGCGFVQ  +R++AE AI  L
Sbjct:  237 DENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFA----DTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQL 358

HSP 2 Score: 23.0978 bits (48), Expect = 1.193e-19
Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 3

Query:  588 GTMIGKQTVRLSWGRS 635
            G  +G   +RLSWGR+
Sbjct:  360 GYPLGNSRIRLSWGRN 375

[Close]

BLAST of HO664272 vs. TrEMBL
Match: B9RY32_RICCO (Nuclear acid binding protein, putative OS=Ricinus communis GN=RCOM_0814100 PE=4 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 7.512e-58
Identity = 101/125 (80.80%), Postives = 115/125 (92.00%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +ENER+RAM EMNGVYCSSR MRIGVATPKK+    QQY+SQA+VLAGGH+ NG++AQGSQS+GDSNNTTIFVGG+DSDISDEDLRQPF QFG+VVSVKIP GKGCGFVQ ADRK+AEDA+Q+LN
Sbjct:  249 DENERSRAMMEMNGVYCSSRPMRIGVATPKKSPAYQQQYSSQALVLAGGHAPNGSMAQGSQSDGDSNNTTIFVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGCGFVQFADRKSAEDALQSLN 373

HSP 2 Score: 40.4318 bits (93), Expect = 7.512e-58
Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 3

Query:  588 GTMIGKQTVRLSWGRSPGNR 647
            GT IGKQTVRLSWGRSP N+
Sbjct:  374 GTTIGKQTVRLSWGRSPANK 393

[Close]

BLAST of HO664272 vs. TrEMBL
Match: B9N4W3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_744254 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.184e-57
Identity = 99/125 (79.20%), Postives = 114/125 (91.20%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +ENE+TRAM EMNG +CSSR MRIGVATPKK     QQY+SQA+VLAGGH+SNGA+AQGSQS+GDSNNTTIFVGG+DSD++DEDLRQPF QFG+VVSVKIPVGKGC FVQ A+RKNAEDA+Q+LN
Sbjct:  208 DENEKTRAMMEMNGAFCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLN 332

HSP 2 Score: 39.2762 bits (90), Expect = 8.184e-57
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 3

Query:  588 GTMIGKQTVRLSWGRSPGNR 647
            GT IGKQTVRLSWGR+P N+
Sbjct:  333 GTTIGKQTVRLSWGRTPANK 352

[Close]

BLAST of HO664272 vs. TrEMBL
Match: B9HRX8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_767539 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.081e-56
Identity = 97/125 (77.60%), Postives = 113/125 (90.40%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +ENE+TRA+TEMNG YCSSR MRIGVATPKK     QQY+SQA+VLAGGH+SNG +AQGSQS+GDSNNTTIFVGG+DSD++DEDLRQPF QFG+VVSVK+P GKGC FVQ A+RKNAEDA+Q+LN
Sbjct:  223 DENEKTRAITEMNGAYCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLN 347

HSP 2 Score: 39.2762 bits (90), Expect = 3.081e-56
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 3

Query:  588 GTMIGKQTVRLSWGRSPGNR 647
            GT IGKQTVRLSWGR+P N+
Sbjct:  348 GTTIGKQTVRLSWGRTPANK 367

[Close]

BLAST of HO664272 vs. TrEMBL
Match: Q9LJL7_ARATH (DNA/RNA binding protein-like OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.727e-53
Identity = 90/125 (72.00%), Postives = 110/125 (88.00%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +ENER+RA+TEMNG YCS+R MR+G+ATPK+   N QQ++SQAV+LAGGH SNG++  GSQS+G+S N TIFVGG+D D+ DEDLRQPF QFG+VVSVKIPVGKGCGFVQ ADRK+AEDAI++LN
Sbjct:  253 DENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLN 377

HSP 2 Score: 36.5798 bits (83), Expect = 6.727e-53
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3

Query:  588 GTMIGKQTVRLSWGRSPGNR 647
            GT+IGK TVRLSWGRSP  +
Sbjct:  378 GTVIGKNTVRLSWGRSPNKQ 397

[Close]

BLAST of HO664272 vs. TrEMBL
Match: D7TPM1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031780001 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 7.124e-51
Identity = 108/169 (63.91%), Postives = 125/169 (73.96%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNRNNDWEADSAPFLGSQSRK*ALMNDS----NGNHYVPSGYEHGY 706
            +ENER+RAM EMNG+YCSSR MRIGVATPKK  G  QQY+SQA+VLAGG++SNGAVAQGSQ+ GDS NTTIFVGGLDS+++DEDLRQ F QFG+VVSVKIPVGKGCGFVQ A+R +AEDA+Q LN     +       G         NDS    NG +Y   GY  GY
Sbjct:  153 DENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQGYGGGY 321

[Close]

BLAST of HO664272 vs. TrEMBL
Match: A5BF74_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029928 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 7.124e-51
Identity = 108/169 (63.91%), Postives = 125/169 (73.96%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNRNNDWEADSAPFLGSQSRK*ALMNDS----NGNHYVPSGYEHGY 706
            +ENER+RAM EMNG+YCSSR MRIGVATPKK  G  QQY+SQA+VLAGG++SNGAVAQGSQ+ GDS NTTIFVGGLDS+++DEDLRQ F QFG+VVSVKIPVGKGCGFVQ A+R +AEDA+Q LN     +       G         NDS    NG +Y   GY  GY
Sbjct:  245 DENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQGYGGGY 413

[Close]

BLAST of HO664272 vs. TrEMBL
Match: O48955_TOBAC (Putative RNA binding protein (Fragment) OS=Nicotiana tabacum GN=QRRBP-1 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.350e-50
Identity = 91/125 (72.80%), Postives = 111/125 (88.80%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +E+ER+RAMTEMNGVYCSSRAMRIGVATPKK     QQY+SQAV+L+GG++SNGA   GSQS+GD++NTTIFVGGLDSD++DE+LRQ F QFG+VVSVKIP GKGCGFVQ +DR +A++AIQ L+
Sbjct:  282 DESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQ-QQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLS 405

HSP 2 Score: 37.7354 bits (86), Expect = 1.350e-50
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3

Query:  585 TGTMIGKQTVRLSWGRSPGNR 647
            +G +IGKQ VRLSWGRSP N+
Sbjct:  405 SGAIIGKQAVRLSWGRSPANK 425

[Close]

BLAST of HO664272 vs. TrEMBL
Match: Q9LEB3_NICPL (RNA Binding Protein 47 OS=Nicotiana plumbaginifolia GN=rbp47 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.994e-50
Identity = 90/125 (72.00%), Postives = 112/125 (89.60%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +E+ER+RAMTEMNGVYCSSRAMRIGVATPKK   + +QY+SQAV+L+GG++SNGA   GSQS+GDS+NTTIFVGGLDS+++DE+LRQ F QFG+VVSVKIP GKGCGFVQ +DR +A++AIQ L+
Sbjct:  228 DESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAH-EQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLS 351

HSP 2 Score: 37.7354 bits (86), Expect = 2.994e-50
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3

Query:  585 TGTMIGKQTVRLSWGRSPGNR 647
            +G +IGKQ VRLSWGRSP N+
Sbjct:  351 SGAIIGKQAVRLSWGRSPANK 371

[Close]

BLAST of HO664272 vs. TrEMBL
Match: Q2V9A1_SOLTU (DNA binding protein ACBF-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.471e-49
Identity = 87/125 (69.60%), Postives = 110/125 (88.00%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +E+ER+RAMTEMNG+YCSSR MR+GVATPKK     QQ++SQAV+L+GG++SNG+   GSQS+GDS+NTTIFVGGLDSD++DE+LRQ F QFG+VVSVKIP GKGCGFVQ +DR +A++AIQ L+
Sbjct:  177 DESERSRAMTEMNGIYCSSRPMRVGVATPKKPSAQ-QQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLS 300

HSP 2 Score: 37.7354 bits (86), Expect = 1.471e-49
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3

Query:  585 TGTMIGKQTVRLSWGRSPGNR 647
            +G +IGKQ VRLSWGRSP N+
Sbjct:  300 SGAIIGKQAVRLSWGRSPANK 320

[Close]

BLAST of HO664272 vs. TrEMBL
Match: Q8LFI9_ARATH (Nuclear acid binding protein, putative OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.709e-49
Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN----------------RNNDWEADSA-PFLGSQSRK*ALMNDSN-GNHYVPSGYEHG 703
            +ENER+RA+TEMNG YCS+R MR+G+ATPK+   N QQ++SQAV+LAGGH SNG++  GSQS+G+S N TIFVGG+D D+ DEDLRQPF QFG+VVSVKIPVGKGCGFVQ ADRK+AEDAI++LN                 N  W  DS   + G  SR     N     NH+  + Y HG
Sbjct:  210 DENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGHGYNNGGGYANHHDSNNY-HG 390

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT3G19130.1 (| Symbols: ATRBP47B, RBP47B | RNA-binding protein 47B | chr3:6611398-6613823 REVERSE LENGTH=435)

HSP 1 Score: 197.593 bits (501), Expect = 5.835e-51
Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN----------------RNNDWEADSA-PFLGSQSRK*ALMNDSN-GNHYVPSGYEHG 703
            +ENER+RA+TEMNG YCS+R MR+G+ATPK+   N QQ++SQAV+LAGGH SNG++  GSQS+G+S N TIFVGG+D D+ DEDLRQPF QFG+VVSVKIPVGKGCGFVQ ADRK+AEDAI++LN                 N  W  DS   + G  SR     N     NH+  + Y HG
Sbjct:  253 DENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGHGYNNGGGYANHHDSNNY-HG 433

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT1G47500.1 (| Symbols: ATRBP47C', RBP47C' | RNA-binding protein 47C' | chr1:17432682-17434805 FORWARD LENGTH=434)

HSP 1 Score: 156.762 bits (395), Expect = 2.943e-44
Identity = 80/125 (64.00%), Postives = 98/125 (78.40%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +ENERT+AMTEMNGV CSSRAMRIG ATP+KT G  QQ         GG+  +GA    ++SEGD+ NTTIFVGGLDS ++DEDL+QPF +FG++VSVKIPVGKGCGFVQ  +R NAE+A++ LN
Sbjct:  250 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---------GGYMPSGAF---TRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLN 362

HSP 2 Score: 40.0466 bits (92), Expect = 2.943e-44
Identity = 16/20 (80.00%), Postives = 19/20 (95.00%), Query Frame = 3

Query:  588 GTMIGKQTVRLSWGRSPGNR 647
            GT+IGKQTVRLSWGR+P N+
Sbjct:  363 GTVIGKQTVRLSWGRNPANK 382

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT1G47490.1 (| Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C | chr1:17424801-17427182 FORWARD LENGTH=432)

HSP 1 Score: 154.836 bits (390), Expect = 1.105e-43
Identity = 79/125 (63.20%), Postives = 96/125 (76.80%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +ENERT+AMTEMNGV CSSRAMRIG ATP+KT G  QQ         GG+  NG +   ++ EGD  NTTIFVGGLDS ++DEDL+QPF +FG++VSVKIPVGKGCGFVQ  +R NAE+A++ LN
Sbjct:  248 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---------GGYMPNGTL---TRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLN 360

HSP 2 Score: 40.0466 bits (92), Expect = 1.105e-43
Identity = 16/20 (80.00%), Postives = 19/20 (95.00%), Query Frame = 3

Query:  588 GTMIGKQTVRLSWGRSPGNR 647
            GT+IGKQTVRLSWGR+P N+
Sbjct:  361 GTVIGKQTVRLSWGRNPANK 380

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT1G49600.1 (| Symbols: ATRBP47A, RBP47A | RNA-binding protein 47A | chr1:18357236-18360150 REVERSE LENGTH=445)

HSP 1 Score: 173.326 bits (438), Expect = 1.178e-43
Identity = 93/181 (51.38%), Postives = 115/181 (63.54%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN----------------RNNDWEADSAPFLGSQSRK*ALMNDSNGNHYVPSGYEHGY 706
            +ENER+RAMTEMNG +CSSR MR+G+ATPK+     QQ  SQA+ LAGGH  NG     S S+G+SNN+TIFVGGLD+D+++EDL QPF  FG+VVSVKIPVGKGCGFVQ A+R++AE+AI  LN                 N  W +DS              N  NG +    GY +GY
Sbjct:  264 DENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNG-----SMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSG-------------NQWNGGYSRGQGYNNGY 426

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT1G54290.1 (| Symbols: | Translation initiation factor SUI1 family protein | chr1:20268710-20269390 REVERSE LENGTH=113)

HSP 1 Score: 129.798 bits (325), Expect = 1.494e-30
Identity = 59/65 (90.77%), Postives = 64/65 (98.46%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            +PT FDPFA+ANAEDSGAGTKEYVHIR+QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGT
Sbjct:    8 VPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT4G27130.1 (| Symbols: | Translation initiation factor SUI1 family protein | chr4:13604814-13605525 REVERSE LENGTH=113)

HSP 1 Score: 129.413 bits (324), Expect = 1.951e-30
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            +PT FDPFA+ANAEDSGAGTKEYVHIR+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGT
Sbjct:    8 VPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT5G54760.3 (| Symbols: | Translation initiation factor SUI1 family protein | chr5:22244732-22245517 FORWARD LENGTH=113)

HSP 1 Score: 127.872 bits (320), Expect = 5.678e-30
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            +PT FDPFA+AN EDSGAGTKEYVHIR+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGT
Sbjct:    8 VPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT5G54760.2 (| Symbols: | Translation initiation factor SUI1 family protein | chr5:22244732-22245517 FORWARD LENGTH=113)

HSP 1 Score: 127.872 bits (320), Expect = 5.678e-30
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            +PT FDPFA+AN EDSGAGTKEYVHIR+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGT
Sbjct:    8 VPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT5G54760.1 (| Symbols: | Translation initiation factor SUI1 family protein | chr5:22244732-22245517 FORWARD LENGTH=113)

HSP 1 Score: 127.872 bits (320), Expect = 5.678e-30
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = -1

Query:   20 IPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 214
            +PT FDPFA+AN EDSGAGTKEYVHIR+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGT
Sbjct:    8 VPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGT 72

[Close]

BLAST of HO664272 vs. TAIR peptide
Match: AT1G11650.2 (| Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:3914895-3917941 FORWARD LENGTH=405)

HSP 1 Score: 113.235 bits (282), Expect = 3.202e-29
Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 2

Query:  212 NENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALN 586
            +E+E+ RAMTEMNGV CS+R MRIG A  KK              + G   S  + A G  ++ D NNTT+FVGGLD+ ++D+ L+  F Q+G++V VKIP GK CGFVQ +++  AE+A++ LN
Sbjct:  206 DESEQIRAMTEMNGVPCSTRPMRIGPAASKKG-------------VTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLN 317

HSP 2 Score: 33.113 bits (74), Expect = 3.202e-29
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 3

Query:  588 GTMIGKQTVRLSWGRSPGNR 647
            G  +G  TVRLSWGRSP N+
Sbjct:  318 GVQLGGTTVRLSWGRSPSNK 337

The following BLAST results are available for this feature:

BLAST of HO664272 vs. SwissProt
BLAST of HO664272 vs. TrEMBL
BLAST of HO664272 vs. TAIR peptide

BLAST of HO664272 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SUI1_SALBA	8.673e-30	90.77	Protein translation factor SUI1 homolog OS=Salix b...	[more]
SUI12_ARATH	1.479e-29	90.77	Protein translation factor SUI1 homolog 2 OS=Arabi...	[more]
SUI1_BRAOL	1.932e-29	90.77	Protein translation factor SUI1 homolog OS=Brassic...	[more]
SUI11_ARATH	1.932e-29	90.77	Protein translation factor SUI1 homolog 1 OS=Arabi...	[more]
SUI1_ORYSJ	6.216e-28	88.41	Protein translation factor SUI1 homolog OS=Oryza s...	[more]
SUI1_ORYSI	6.216e-28	88.41	Protein translation factor SUI1 homolog OS=Oryza s...	[more]
SUI1_SPOST	1.385e-27	86.96	Protein translation factor SUI1 homolog OS=Sporobo...	[more]
SUI1_MAIZE	2.362e-27	86.96	Protein translation factor SUI1 homolog OS=Zea may...	[more]
SUI1_PIMBR	3.192e-24	80.60	Protein translation factor SUI1 homolog OS=Pimpine...	[more]
YG41_SCHPO	1.193e-19	41.27	Uncharacterized RNA-binding protein C23E6.01c OS=S...	[more]

BLAST of HO664272 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RY32_RICCO	7.512e-58	80.80	Nuclear acid binding protein, putative OS=Ricinus ...	[more]
B9N4W3_POPTR	8.184e-57	79.20	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HRX8_POPTR	3.081e-56	77.60	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9LJL7_ARATH	6.727e-53	72.00	DNA/RNA binding protein-like OS=Arabidopsis thalia...	[more]
D7TPM1_VITVI	7.124e-51	63.91	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BF74_VITVI	7.124e-51	63.91	Putative uncharacterized protein OS=Vitis vinifera...	[more]
O48955_TOBAC	1.350e-50	72.80	Putative RNA binding protein (Fragment) OS=Nicotia...	[more]
Q9LEB3_NICPL	2.994e-50	72.00	RNA Binding Protein 47 OS=Nicotiana plumbaginifoli...	[more]
Q2V9A1_SOLTU	1.471e-49	69.60	DNA binding protein ACBF-like OS=Solanum tuberosum...	[more]
Q8LFI9_ARATH	8.709e-49	56.59	Nuclear acid binding protein, putative OS=Arabidop...	[more]

BLAST of HO664272 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G19130.1	5.835e-51	56.59	\| Symbols: ATRBP47B, RBP47B \| RNA-binding protein ...	[more]
AT1G47500.1	2.943e-44	64.00	\| Symbols: ATRBP47C', RBP47C' \| RNA-binding protei...	[more]
AT1G47490.1	1.105e-43	63.20	\| Symbols: ATRBP47C, RBP47C \| RNA-binding protein ...	[more]
AT1G49600.1	1.178e-43	51.38	\| Symbols: ATRBP47A, RBP47A \| RNA-binding protein ...	[more]
AT1G54290.1	1.494e-30	90.77	\| Symbols: \| Translation initiation factor SUI1 f...	[more]
AT4G27130.1	1.951e-30	90.77	\| Symbols: \| Translation initiation factor SUI1 f...	[more]
AT5G54760.3	5.678e-30	89.23	\| Symbols: \| Translation initiation factor SUI1 f...	[more]
AT5G54760.2	5.678e-30	89.23	\| Symbols: \| Translation initiation factor SUI1 f...	[more]
AT5G54760.1	5.678e-30	89.23	\| Symbols: \| Translation initiation factor SUI1 f...	[more]
AT1G11650.2	3.202e-29	46.40	\| Symbols: ATRBP45B, RBP45B \| RNA-binding (RRM/RBD...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 141..196 score: 1.5
IPR000504	RNA recognition motif domain	SMART	SM00360	no description	coord: 140..203 score: 3.1
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 139..214 score: 14
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 137..196 score: 7
None	No IPR available	PANTHER	PTHR10432	RNA-BINDING PROTEIN	coord: 71..195 score: 2.6
None	No IPR available	PANTHER	PTHR10432:SF67	NUCLEAR ACID BINDING PROTEIN	coord: 71..195 score: 2.6
None	No IPR available	SEG	seg	seg	coord: 10..24 score
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 128..195 score: 3.5
None	No IPR available	SEG	seg	seg	coord: 26..34 score
None	No IPR available	SEG	seg	seg	coord: 9..23 score
None	No IPR available	GENE3D	3.30.780.10	no description	coord: 40..104 score: 3
None	No IPR available	PANTHER	PTHR10388	TRANSLATION FACTOR SUI1	coord: 59..104 score: 3.6
IPR001950	Translation initiation factor SUI1	PFAM	PF01253	SUI1	coord: 58..105 score: 3.5
IPR001950	Translation initiation factor SUI1	PROFILE	PS50296	SUI1	coord: 63..104 score: 14
IPR001950	Translation initiation factor SUI1	SUPERFAMILY	55159	eIF1-like	coord: 22..105 score: 1.3

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO664272 ID=HO664272; Name=HO664272; organism=Cicer arietinum; type=EST; length=724bp
TCGAGCGGCCGCCCGGGCAGGTACCATTACAACAAAACTCCTTCTTAAGG
TCTTTAAGAATCTTGTTGTAACTGAATTCTTTCTTCAATCCCTGCACAGT
TGTCAAGCTTTTTCTACCATTTCGCTGCTGTATACGAATATGCACATACT
CTTTTGTCCCAGCACCGGAATCCTCAGCATTTGCCTCAGCAAAAGGATCG
AAGGTAGTAGGAATGAAAATGAGAGGACAAGGGCAATGACTGAAATGAAT
GGTGTTTATTGTTCTAGCAGGGCGATGCGAATAGGTGTTGCAACACCCAA
AAAAACTTATGGAAATCCCCAACAATATGCCTCACAAGCTGTGGTGTTGG
CTGGTGGACACTCATCTAATGGTGCTGTGGCCCAAGGTTCCCAATCTGAA
GGGGATTCTAACAACACAACTATATTTGTTGGAGGGCTTGATTCTGACAT
CAGTGATGAGGATCTCAGACAACCATTTTTGCAATTTGGTGATGTTGTCT
CTGTGAAGATTCCAGTCGGTAAAGGATGTGGTTTTGTTCAACTTGCTGAC
AGAAAGAATGCTGAGGACGCAATTCAAGCATTGAACAGGAACAATGATTG
GGAAGCAGACAGTGCGCCTTTCTTGGGGTCGCAGTCCAGGAAATAGGCAT
TGATGAATGATTCTAATGGGAATCATTACGTGCCGTCAGGGTATGAGCAT
GGATATGAGTCATGATTGCTGCTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003743	translation initiation factor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR001950	SUI1

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