FL512337

EST Overview


Name	FL512337
Unique Name	FL512337
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	330

Libraries


Library Name	Type
LIBEST_023567 Subtracted cDNA library of drought-stressed chickpea cultivar	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FL512337 vs. SwissProt
Match: YQL5_SCHPO (Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe GN=SPCC1827.05c PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.296e-26
Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 2

Query:   62 RKIPEQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQ 319
            +K+ E K L+    VLY+GR+PHGFYEK+M  YF QFG + RLR++RN+KTG S+H+ F+EFES +VA +VA+TMHNYLL+  LLQ
Sbjct:   92 KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFIEFESLDVANVVAETMHNYLLYGKLLQ 177

[Close]

BLAST of FL512337 vs. SwissProt
Match: NOP15_YEAST (Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae GN=NOP15 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.069e-24
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 2

Query:   62 RKIPEQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            +K  ++K LE  S ++Y+ R+PHGF+EKE+  YF QFG +K +R+ARNKKTG SRH+GFLEF + E A I  ++M+NYLL  HLLQV V
Sbjct:   78 KKSKDKKTLEEYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRV 166

[Close]

BLAST of FL512337 vs. SwissProt
Match: MK67I_BOVIN (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus GN=MKI67IP PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.175e-19
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 2

Query:   62 RKIPEQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQ 319
            R   +Q+  + T  V+Y+G +P   YE ++ AYF QFGT+ R R++R+KKTG S+ +GF+EFES +VAKI A+TM+NYL  E LL+
Sbjct:   32 RATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAETMNNYLFGERLLK 117

[Close]

BLAST of FL512337 vs. SwissProt
Match: MK67I_DANRE (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio GN=mki67ip PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.004e-19
Identity = 47/112 (41.96%), Postives = 73/112 (65.18%), Query Frame = 2

Query:    8 AIKPSQGADFLPLEGGPGRKIPEQKPLENTSS-----VLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            A+ P + A+F        +K+ + K    T       VLY+G +P G +E ++++YF QFG + RLR++R+KKTG S+ +GF+EFE  EVAKIVA+TM+NYL+ E +++  V
Sbjct:   16 ALNPKEDAEFQ-------KKVQQVKKRPQTGQTLSPGVLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETMNNYLMGERIIKCHV 120

[Close]

BLAST of FL512337 vs. SwissProt
Match: MK67I_XENTR (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis GN=mki67ipl PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.465e-19
Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 2

Query:  104 VLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQ 319
            V+YIG IP   YE ++  YF QFGT+ RLR++R+KKTG S+ + ++EFE  EVAKIVADTM+NYL  E LL+
Sbjct:   42 VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTMNNYLFCERLLK 113

[Close]

BLAST of FL512337 vs. SwissProt
Match: MK67I_XENLA (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis GN=mki67ipl PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.216e-18
Identity = 41/75 (54.67%), Postives = 56/75 (74.67%), Query Frame = 2

Query:   95 TSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQ 319
            T  V+YIG IP    E +++ YF QFGT+ RLR++R+KKTG S+ + ++E+E  EVAKIVADTM+NYL  E LL+
Sbjct:   39 TPGVIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTMNNYLFCERLLK 113

[Close]

BLAST of FL512337 vs. SwissProt
Match: MK67I_HUMAN (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Homo sapiens GN=MKI67IP PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.129e-17
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2

Query:    8 AIKPSQGADFLPLEGGPGRKIPEQKPLEN-TSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQ 319
            ++ P +  +F        ++I ++K  E  T  V+Y+  +P+   E ++ +YF QFGT+ R R++R+K+TG S+ + F+EFES +VAKIVA+TM+NYL  E LL+
Sbjct:   13 SLNPQEDVEFQKEVAQVRKRITQRKKQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLE 117

[Close]

BLAST of FL512337 vs. SwissProt
Match: MK67I_RAT (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Rattus norvegicus GN=Mki67ip PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.621e-16
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 2

Query:   62 RKIPEQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLL 316
            R+  ++K  +  S V+Y+G +P    E  +  Y  QFG I+R R++R+K+TG SR F F+EFES +VAKIVA+TM NYL  E LL
Sbjct:   31 RRAKKKKEEKLNSGVVYLGHLPSTLSESHIYDYCAQFGDIRRFRLSRSKRTGNSRGFAFVEFESEDVAKIVAETMDNYLFGERLL 115

[Close]

BLAST of FL512337 vs. SwissProt
Match: MK67I_MOUSE (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus musculus GN=Mki67ip PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.293e-15
Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 2

Query:    8 AIKPSQGADF-LPLEGGPGR-KIPEQKPLENTS-SVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLL 316
            A+ P + + F   L    GR K P+QK  E  +  V+Y+G +P    E  +  Y  QFG I R R++R+K+TG S+ + F+EFES +VAKIVA+TM NYL  E LL
Sbjct:   13 ALNPQEDSQFEKALTQIQGRTKKPQQKKKEKLNRGVVYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMDNYLFGERLL 118

[Close]

BLAST of FL512337 vs. SwissProt
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 2.299e-7
Identity = 26/68 (38.24%), Postives = 37/68 (54.41%), Query Frame = 2

Query:   86 LENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMH 289
            L   S  ++IG +     E  +  YFG++GT+  L+I ++  TG+SR FGFL FE P     V  T H
Sbjct:  154 LSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQH 221

[Close]

BLAST of FL512337 vs. TrEMBL
Match: C6TG27_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.532e-48
Identity = 92/107 (85.98%), Postives = 101/107 (94.39%), Query Frame = 2

Query:   14 KPSQGADFLPLEGGPGRKIP--EQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            KPS+GADFLPLEGGP RK+   +QKP ENT++VLY+GRIPHGFYEKEME YFGQFGTIKRLRIARNKK+GKSRHFGF+EFESPEVAKIVADTMHNYLLFEHLLQV+V
Sbjct:   20 KPSEGADFLPLEGGPARKLAASQQKPPENTATVLYVGRIPHGFYEKEMEGYFGQFGTIKRLRIARNKKSGKSRHFGFIEFESPEVAKIVADTMHNYLLFEHLLQVYV 126

[Close]

BLAST of FL512337 vs. TrEMBL
Match: B9HW06_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_660197 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.140e-42
Identity = 81/100 (81.00%), Postives = 91/100 (91.00%), Query Frame = 2

Query:   29 ADFLPLEGGPGRKIPEQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            ADFLPLEGGP RK+PE K L+  S VLYIGRIPHGFYE+EM+AYF QFGTIKRLRIARNKKTGKS+HFGF+EFE PEVA++VA+ MHNYLLFEHLLQV+V
Sbjct:   32 ADFLPLEGGPARKLPELKELKKKSGVLYIGRIPHGFYEEEMKAYFSQFGTIKRLRIARNKKTGKSKHFGFMEFEDPEVAEVVAECMHNYLLFEHLLQVYV 131

[Close]

BLAST of FL512337 vs. TrEMBL
Match: D7TUN1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021851001 PE=4 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.193e-41
Identity = 79/100 (79.00%), Postives = 91/100 (91.00%), Query Frame = 2

Query:   29 ADFLPLEGGPGRKIPEQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            ADFLPLEGGPG ++PEQ+P +NT +VLYIGRIPHGFYE EME +F QFG +KRLRIARNKKTGKS+HFGF+EFESPEVAKIVA+ MHN+LLFEH+LQV V
Sbjct:   30 ADFLPLEGGPGHELPEQEPPKNTGTVLYIGRIPHGFYENEMEGFFKQFGAVKRLRIARNKKTGKSKHFGFIEFESPEVAKIVAECMHNHLLFEHILQVHV 129

[Close]

BLAST of FL512337 vs. TrEMBL
Match: Q2VCH8_SOLTU (RNA binding protein-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.319e-40
Identity = 78/107 (72.90%), Postives = 93/107 (86.92%), Query Frame = 2

Query:    2 ATAIKPSQGADFLPLEGGPGRKIPEQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQV 322
            A++    +  +FLPLEGGP +K+P+ +  EN ++VLYIGRIPHGFYE EME +F QFGTIKRLRIARNKKTGKS+HFGF+EFESPEVAK+VA+TMHNYLLFEHLLQV
Sbjct:   23 ASSASKDEAREFLPLEGGPAQKLPKTELKENKATVLYIGRIPHGFYENEMEGFFKQFGTIKRLRIARNKKTGKSKHFGFIEFESPEVAKVVAETMHNYLLFEHLLQV 129

[Close]

BLAST of FL512337 vs. TrEMBL
Match: B9SY14_RICCO (Poly-A binding protein, putative OS=Ricinus communis GN=RCOM_0436100 PE=4 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.838e-40
Identity = 78/101 (77.23%), Postives = 93/101 (92.08%), Query Frame = 2

Query:   29 ADFLPLEGGPGRKIPEQKPLENTSS-VLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            ADFLPLEGG GRK+ EQK ++ +++ VLYIGRIPHGFYEKEM+AYF QFGTIK+LRIARNKKTGKS+H+GF+EFE PEVA++VAD MHNYLLFEHLLQV++
Sbjct:   30 ADFLPLEGGSGRKLAEQKEVKKSNATVLYIGRIPHGFYEKEMQAYFSQFGTIKKLRIARNKKTGKSKHYGFIEFEDPEVAEVVADCMHNYLLFEHLLQVYL 130

[Close]

BLAST of FL512337 vs. TrEMBL
Match: D7LXK7_ARALY (RNA recognition motif-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908347 PE=4 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.156e-36
Identity = 72/105 (68.57%), Postives = 88/105 (83.81%), Query Frame = 2

Query:   17 PSQGADFLPLEGGPGRKIP-EQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            P   ADFLPLEGGP RK P   +PLEN ++VLYIGRIPHGFYE E+EA+F QFGT+KR+R+ARNKKTGKS+HFGF++FE PEVA+I A  M++YLL EH+L+V V
Sbjct:   31 PKPSADFLPLEGGPARKAPVTSQPLENKATVLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGAMNDYLLMEHMLKVHV 135

[Close]

BLAST of FL512337 vs. TrEMBL
Match: Q8SAB6_ELAOL (RNA binding protein OS=Elaeis oleifera PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.971e-36
Identity = 70/104 (67.31%), Postives = 93/104 (89.42%), Query Frame = 2

Query:   14 KPSQGADFLPLEGGPGRKIPE-QKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQV 322
            + ++ +DFLPLEGGPGR+I E ++P++ T++VLYIG IPHGFYE++M+ +F QFG IKRLRI+RN+KTGKS+H+GFLEFE+PEVAK+VAD M+NYLLFEH LQ+
Sbjct:   25 RTNESSDFLPLEGGPGRRIAEPEEPVKETATVLYIGHIPHGFYEEQMQGFFQQFGKIKRLRISRNRKTGKSKHYGFLEFENPEVAKVVADEMNNYLLFEHNLQL 128

[Close]

BLAST of FL512337 vs. TrEMBL
Match: Q9LZ65_ARATH (AT5g04600/T32M21_200 OS=Arabidopsis thaliana GN=T32M21_200 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.736e-36
Identity = 71/105 (67.62%), Postives = 87/105 (82.86%), Query Frame = 2

Query:   17 PSQGADFLPLEGGPGRKIP-EQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            P   ADFLPLEGGP RK P    PL+N ++VLYIGRIPHGFYE E+EA+F QFGT+KR+R+ARNKKTGKS+HFGF++FE PEVA+I A  M++YLL EH+L+V V
Sbjct:   31 PKPSADFLPLEGGPARKAPVTTPPLQNKATVLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGAMNDYLLMEHMLKVHV 135

[Close]

BLAST of FL512337 vs. TrEMBL
Match: Q70KT2_ORYSJ (TA8 protein (Fragment) OS=Oryza sativa subsp. japonica GN=ta8 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.180e-35
Identity = 73/112 (65.18%), Postives = 93/112 (83.04%), Query Frame = 2

Query:    2 ATAIKPSQGADFLPLEGGPGRK-IPEQKPLE--NTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            + A +  +G DFLPLE  PG+K   E++P E  NTS+VLYIG IPHGFYE++M+ +F QFGT+KRLRIARN+KTGKS+H+GF+EFE+PEVAKIVAD M+NYLLFEH LQ+ +
Sbjct:   18 SAAPRSGEGKDFLPLEERPGKKRAREEQPEEPENTSTVLYIGHIPHGFYEEQMQGFFQQFGTVKRLRIARNRKTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAI 129

[Close]

BLAST of FL512337 vs. TrEMBL
Match: Q6Z568_ORYSJ (Os08g0412200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0007M04.13 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.180e-35
Identity = 73/112 (65.18%), Postives = 93/112 (83.04%), Query Frame = 2

Query:    2 ATAIKPSQGADFLPLEGGPGRK-IPEQKPLE--NTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            + A +  +G DFLPLE  PG+K   E++P E  NTS+VLYIG IPHGFYE++M+ +F QFGT+KRLRIARN+KTGKS+H+GF+EFE+PEVAKIVAD M+NYLLFEH LQ+ +
Sbjct:   18 SAAPRSGEGKDFLPLEERPGKKRAREEQPEEPENTSTVLYIGHIPHGFYEEQMQGFFQQFGTVKRLRIARNRKTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAI 129

[Close]

BLAST of FL512337 vs. TAIR peptide
Match: AT5G04600.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:1323700-1325486 FORWARD LENGTH=222)

HSP 1 Score: 153.68 bits (387), Expect = 2.207e-38
Identity = 71/105 (67.62%), Postives = 87/105 (82.86%), Query Frame = 2

Query:   17 PSQGADFLPLEGGPGRKIP-EQKPLENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQVFV 328
            P   ADFLPLEGGP RK P    PL+N ++VLYIGRIPHGFYE E+EA+F QFGT+KR+R+ARNKKTGKS+HFGF++FE PEVA+I A  M++YLL EH+L+V V
Sbjct:   31 PKPSADFLPLEGGPARKAPVTTPPLQNKATVLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGAMNDYLLMEHMLKVHV 135

[Close]

BLAST of FL512337 vs. TAIR peptide
Match: AT4G26650.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:13445552-13447592 FORWARD LENGTH=455)

HSP 1 Score: 53.1434 bits (126), Expect = 4.059e-8
Identity = 27/75 (36.00%), Postives = 45/75 (60.00%), Query Frame = 2

Query:   71 PEQKPLENTSSV--LYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMH 289
            PE++ +E+ S +  L+IG I     E+ ++ YFG++G +    I R++ TG++R FGF+ F  P VA+ V    H
Sbjct:    3 PEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDKH 77

[Close]

BLAST of FL512337 vs. TAIR peptide
Match: AT3G07810.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495102 FORWARD LENGTH=495)

HSP 1 Score: 51.2174 bits (121), Expect = 1.542e-7
Identity = 24/69 (34.78%), Postives = 40/69 (57.97%), Query Frame = 2

Query:   86 LENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHN 292
            +++ +  L+IG I     E+ ++ YF  FG +    I +++ TG++R FGF+ F  P VA+IV    HN
Sbjct:    1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEKHN 69

[Close]

BLAST of FL512337 vs. TAIR peptide
Match: AT3G07810.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494)

HSP 1 Score: 51.2174 bits (121), Expect = 1.542e-7
Identity = 24/69 (34.78%), Postives = 40/69 (57.97%), Query Frame = 2

Query:   86 LENTSSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHN 292
            +++ +  L+IG I     E+ ++ YF  FG +    I +++ TG++R FGF+ F  P VA+IV    HN
Sbjct:    1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEKHN 69

[Close]

BLAST of FL512337 vs. TAIR peptide
Match: AT3G47120.1 (| Symbols: | RNA recognition motif (RRM)-containing protein | chr3:17351334-17352769 REVERSE LENGTH=352)

HSP 1 Score: 50.0618 bits (118), Expect = 3.436e-7
Identity = 24/75 (32.00%), Postives = 41/75 (54.67%), Query Frame = 2

Query:   98 SSVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMHNYLLFEHLLQV 322
            S+ +Y+G IP    E ++ A F Q+G I  + + R+K TGKS+ F FL +E      +  D ++  L+    ++V
Sbjct:   35 SAYVYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKV 109

[Close]

BLAST of FL512337 vs. TAIR peptide
Match: AT4G26650.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:13445265-13447592 FORWARD LENGTH=452)

HSP 1 Score: 48.9062 bits (115), Expect = 7.655e-7
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 2

Query:   74 EQKPLENTSSV--LYIGRIPHGFYEKEMEAYFGQFGTIKRLRIARNKKTGKSRHFGFLEFESPEVAKIVADTMH 289
            EQK +E+ S +  L+IG I     E+ ++ YFG++G +    I R++ TG++R FGF+ F  P VA+ V    H
Sbjct:    2 EQK-MESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDKH 74

The following BLAST results are available for this feature:

BLAST of FL512337 vs. SwissProt
BLAST of FL512337 vs. TrEMBL
BLAST of FL512337 vs. TAIR peptide

BLAST of FL512337 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
YQL5_SCHPO	1.296e-26	59.30	Uncharacterized RNA-binding protein C1827.05c OS=S...	[more]
NOP15_YEAST	2.069e-24	56.18	Ribosome biogenesis protein 15 OS=Saccharomyces ce...	[more]
MK67I_BOVIN	1.175e-19	50.00	MKI67 FHA domain-interacting nucleolar phosphoprot...	[more]
MK67I_DANRE	2.004e-19	41.96	MKI67 FHA domain-interacting nucleolar phosphoprot...	[more]
MK67I_XENTR	4.465e-19	58.33	MKI67 FHA domain-interacting nucleolar phosphoprot...	[more]
MK67I_XENLA	2.216e-18	54.67	MKI67 FHA domain-interacting nucleolar phosphoprot...	[more]
MK67I_HUMAN	7.129e-17	40.00	MKI67 FHA domain-interacting nucleolar phosphoprot...	[more]
MK67I_RAT	4.621e-16	48.24	MKI67 FHA domain-interacting nucleolar phosphoprot...	[more]
MK67I_MOUSE	2.293e-15	44.34	MKI67 FHA domain-interacting nucleolar phosphoprot...	[more]
HRP1_YEAST	2.299e-7	38.24	Nuclear polyadenylated RNA-binding protein 4 OS=Sa...	[more]

BLAST of FL512337 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TG27_SOYBN	6.532e-48	85.98	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9HW06_POPTR	3.140e-42	81.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TUN1_VITVI	1.193e-41	79.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q2VCH8_SOLTU	1.319e-40	72.90	RNA binding protein-like protein OS=Solanum tubero...	[more]
B9SY14_RICCO	3.838e-40	77.23	Poly-A binding protein, putative OS=Ricinus commun...	[more]
D7LXK7_ARALY	1.156e-36	68.57	RNA recognition motif-containing protein OS=Arabid...	[more]
Q8SAB6_ELAOL	1.971e-36	67.31	RNA binding protein OS=Elaeis oleifera PE=2 SV=1	[more]
Q9LZ65_ARATH	5.736e-36	67.62	AT5g04600/T32M21_200 OS=Arabidopsis thaliana GN=T3...	[more]
Q70KT2_ORYSJ	2.180e-35	65.18	TA8 protein (Fragment) OS=Oryza sativa subsp. japo...	[more]
Q6Z568_ORYSJ	2.180e-35	65.18	Os08g0412200 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of FL512337 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT5G04600.1	2.207e-38	67.62	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT4G26650.1	4.059e-8	36.00	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT3G07810.2	1.542e-7	34.78	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT3G07810.1	1.542e-7	34.78	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT3G47120.1	3.436e-7	32.00	\| Symbols: \| RNA recognition motif (RRM)-containi...	[more]
AT4G26650.2	7.655e-7	37.84	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 36..102 score: 4.1
IPR000504	RNA recognition motif domain	SMART	SM00360	no description	coord: 35..108 score: 4.3
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 34..109 score: 14
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 26..107 score: 9.3
None	No IPR available	PANTHER	PTHR10432	RNA-BINDING PROTEIN	coord: 30..107 score: 8.1
None	No IPR available	PANTHER	PTHR10432:SF41	NUCLEOLAR PHOSPHOPROTEIN	coord: 30..107 score: 8.1
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 17..109 score: 4.4
None	No IPR available	SEG	seg	seg	coord: 23..38 score
None	No IPR available	SEG	seg	seg	coord: 6..22 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FL512337 ID=FL512337; Name=FL512337; organism=Cicer arietinum; type=EST; length=330bp
GGCCACTGCTATTAAACCATCTCAGGGTGCTGATTTTTTGCCGTTGGAAG
GTGGTCCTGGTCGCAAAATTCCGGAACAGAAACCTCTTGAGAATACTTCT
TCGGTTTTGTATATTGGTAGGATTCCACACGGGTTCTATGAGAAGGAGAT
GGAAGCTTATTTTGGACAATTTGGAACTATTAAGAGATTGAGAATTGCCA
GAAATAAAAAGACTGGAAAATCAAGACATTTCGGGTTCCTAGAATTTGAA
TCTCCTGAGGTAGCAAAAATTGTAGCCGATACTATGCACAATTATTTGCT
TTTTGAACACCTTCTTCAAGTTTTTGTTGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Search form