GR395731

EST Overview
NameGR395731
Unique NameGR395731
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length711
Libraries
Library NameType
LIBEST_024781 ICC4958 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR395731 vs. TrEMBL
Match: C6SXB0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.329e-38
Identity = 87/125 (69.60%), Postives = 98/125 (78.40%), Query Frame = 2
Query:    5 VNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFAIXXXXXXXXXXXXXXXXXSSPSTE 379
            VNPNTD+DDLPPDTFNK+SGNS+E+LKLRV+YI+PTSPE    DDA+KNS Q LNSSSA+Q LKEER+AA RQTRQLQQELD+LKR R+RR DPGFSFTFAI                 SSPSTE
Sbjct:   94 VNPNTDLDDLPPDTFNKESGNSVEELKLRVAYISPTSPE----DDASKNS-QSLNSSSALQNLKEERDAAARQTRQLQQELDMLKRRRNRRSDPGFSFTFAIFVGLLGALLGFLMKLLFSSPSTE 213          
BLAST of GR395731 vs. TrEMBL
Match: B9GYP5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_553932 PE=4 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.778e-28
Identity = 71/127 (55.91%), Postives = 86/127 (67.72%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDS-GNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFAIXXXXXXXXXXXXXXXXXSSPSTE 379
            IV P+ DVD+LPPDTF KDS G  I D KLRV YI P+S +G+SED+  K S+Q  +++SAVQ LK+ER+AAVRQT+ LQQELDLL+R R R+ DPGFS  FA                  SSPSTE
Sbjct:   96 IVPPHADVDELPPDTFIKDSDGKVIHDRKLRVVYIPPSSTQGNSEDEGLKGSTQSPDANSAVQSLKDERDAAVRQTQLLQQELDLLRRRRYRKSDPGFSLMFAFVVGLIGIMVGFLLNLSLSSPSTE 222          
BLAST of GR395731 vs. TrEMBL
Match: B9T0M0_RICCO (Vesicle-associated membrane protein, putative OS=Ricinus communis GN=RCOM_0192760 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.691e-23
Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKD-SGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFAIXXXXXXXXXXXXXXXXXSSPSTE 379
            IV  +TDVD+LPPDTF KD +G ++E+ KLRV Y+ P S +G+SED+A ++S      +  +Q LK+ER+AA++QT+QLQ ELD++KR R R+ DPGFS TFA                  SSPSTE
Sbjct:   96 IVPAHTDVDELPPDTFTKDGTGKTVEECKLRVLYVAP-SAQGNSEDEALRSSLTN-PEAYGLQHLKDERDAAIKQTQQLQHELDMMKRRRYRKSDPGFSLTFAFVVGLVGILLGFLLNLSLSSPSTE 220          
BLAST of GR395731 vs. TrEMBL
Match: Q9LVU1_ARATH (Putative VAMP (Vesicle-associated membrane protein)-associated protein OS=Arabidopsis thaliana GN=At5g47180 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.636e-20
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRR 277
            IV P+TDVD+LP DTF KDSG ++ + KL+VSYITP++ + SSE  A     Q   + S +Q LKEER+AAV+QT+QLQ EL+ ++R R++R
Sbjct:   96 IVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETVRRRRNQR 187          
BLAST of GR395731 vs. TrEMBL
Match: D7MPW2_ARALY (Vesicle-associated membrane family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494260 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.058e-19
Identity = 48/92 (52.17%), Postives = 68/92 (73.91%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRR 277
            IV P+TDVD+LP DTF KDSG ++ + KL+VSYI+P++ + SSE  A     Q   + S +Q LKEER+AAV+QT+QLQ EL+ ++R R++R
Sbjct:   96 IVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYISPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETVRRRRNQR 187          
BLAST of GR395731 vs. TrEMBL
Match: Q84XQ0_BRARP (Putative VAMP-associated protein (Fragment) OS=Brassica rapa subsp. pekinensis PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.805e-19
Identity = 51/102 (50.00%), Postives = 71/102 (69.61%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFA 307
            IV P+TDVDDLP DTF KDSG ++ + KL+VSYI+P++ + SSE  A         + S +Q LKEER+AAV+QT+QLQ EL+++KR R+ + + G S   A
Sbjct:   43 IVPPHTDVDDLPQDTFTKDSGKTLTECKLKVSYISPSTTQRSSESGATNGDRNGSETISTIQRLKEERDAAVKQTQQLQHELEMVKRRRN-QSNSGLSLKLA 143          
BLAST of GR395731 vs. TrEMBL
Match: Q2A9M0_BRAOL (Vesicle-associated membrane protein, putative OS=Brassica oleracea GN=26.t00062 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.805e-19
Identity = 51/102 (50.00%), Postives = 71/102 (69.61%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFA 307
            IV P+TDVDDLP DTF KDSG ++ + KL+VSYI+P++ + SSE  A         + S +Q LKEER+AAV+QT+QLQ EL+++KR R+ + + G S   A
Sbjct:  106 IVPPHTDVDDLPQDTFTKDSGKTLTECKLKVSYISPSTTQRSSESGAINGDGNGSETISTIQRLKEERDAAVKQTQQLQHELEMVKRRRN-QSNSGLSLKLA 206          
BLAST of GR395731 vs. TrEMBL
Match: C4J925_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.383e-17
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 2
Query:    5 VNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPT---------SPEGSSEDDAAKNSSQKLNSSS-----AVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFA 307
            V  +TD+D++PPDTFNK++   IE++KL+V Y  P+         S  GS    AA +    L ++S      +Q LKEER+  ++Q +Q+Q+ELD+L+R RSR+GD GFS TFA
Sbjct:   95 VAASTDMDEIPPDTFNKEADKVIEEMKLKVVYTLPSCGGSDDSSVSSLGSRSFKAASDDLMMLKNASLEEIQTIQRLKEERDNMLQQNQQMQRELDVLRRRRSRKGDAGFSLTFA 209          
BLAST of GR395731 vs. TrEMBL
Match: C0PIM8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.383e-17
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 2
Query:    5 VNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPT---------SPEGSSEDDAAKNSSQKLNSSS-----AVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFA 307
            V  +TD+D++PPDTFNK++   IE++KL+V Y  P+         S  GS    AA +    L ++S      +Q LKEER+  ++Q +Q+Q+ELD+L+R RSR+GD GFS TFA
Sbjct:  115 VAASTDMDEIPPDTFNKEADKVIEEMKLKVVYTLPSCGGSDDSSVSSLGSRSFKAASDDLMMLKNASLEEIQTIQRLKEERDNMLQQNQQMQRELDVLRRRRSRKGDAGFSLTFA 229          
BLAST of GR395731 vs. TrEMBL
Match: C0HE97_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.383e-17
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 2
Query:    5 VNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPT---------SPEGSSEDDAAKNSSQKLNSSS-----AVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFA 307
            V  +TD+D++PPDTFNK++   IE++KLRV Y  P+         S  GS    AA +    L ++S      +Q +KEER+  ++Q +Q+Q+ELD+L+R RSR+GD GFS TFA
Sbjct:   95 VAASTDMDEIPPDTFNKETDKVIEEMKLRVVYTLPSGGGSDDSSVSSLGSRSFKAASDDLMMLKNASIEEIQTIQRVKEERDNMLQQNQQMQRELDVLRRRRSRKGDAGFSLTFA 209          
BLAST of GR395731 vs. TAIR peptide
Match: AT5G47180.2 (| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220)

HSP 1 Score: 102.449 bits (254), Expect = 2.466e-22
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRR 277
            IV P+TDVD+LP DTF KDSG ++ + KL+VSYITP++ + SSE  A     Q   + S +Q LKEER+AAV+QT+QLQ EL+ ++R R++R
Sbjct:   96 IVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETVRRRRNQR 187          
BLAST of GR395731 vs. TAIR peptide
Match: AT5G47180.1 (| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220)

HSP 1 Score: 102.449 bits (254), Expect = 2.466e-22
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRR 277
            IV P+TDVD+LP DTF KDSG ++ + KL+VSYITP++ + SSE  A     Q   + S +Q LKEER+AAV+QT+QLQ EL+ ++R R++R
Sbjct:   96 IVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETVRRRRNQR 187          
BLAST of GR395731 vs. TAIR peptide
Match: AT3G60600.1 (| Symbols: VAP27-1, VAP, (AT)VAP, VAP27 | vesicle associated protein | chr3:22400537-22402408 FORWARD LENGTH=256)

HSP 1 Score: 56.9954 bits (136), Expect = 1.188e-8
Identity = 33/132 (25.00%), Postives = 61/132 (46.21%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSP-----EGSSE------------------------DDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFAI 310
            I +P     ++ P+ F+K++G+ +E+ KLRV+Y+ P  P     EGS E                        D+ A +      + + +  L EE+++A++   +LQ+ELD L+R   +    G  F + +
Sbjct:  109 IASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVL 240          
BLAST of GR395731 vs. TAIR peptide
Match: AT2G45140.1 (| Symbols: PVA12 | plant VAP homolog 12 | chr2:18611029-18612971 FORWARD LENGTH=239)

HSP 1 Score: 55.4546 bits (132), Expect = 3.457e-8
Identity = 39/135 (28.89%), Postives = 60/135 (44.44%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSP-----EGSSED---------------------------DAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFAI 310
            + +P     D+  + F+K++G+ +E+ KLRV Y+ P  P     EGS E                            DA  NSS+   + + V  L EE+ +AV+   +LQQELD L+R   R    G  F + +
Sbjct:   92 VASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSE---ARALVTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVL 223          
BLAST of GR395731 vs. TAIR peptide
Match: AT4G00170.1 (| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr4:70732-72085 REVERSE LENGTH=239)

HSP 1 Score: 53.1434 bits (126), Expect = 1.716e-7
Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 2
Query:    2 IVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYI--TPTS--PEGSSEDDAAKNSSQKLNSSSA-----------------------VQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFS 295
            +V+  T   ++  + FNK++G  IED KLRV YI   P S  PEGS E ++   S   + S SA                       +  L EE+ +A +Q+++L+ EL++L++  S++   G S
Sbjct:   94 VVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLTEEKTSATQQSQKLRLELEMLRKETSKKQSGGHS 218          
The following BLAST results are available for this feature:
BLAST of GR395731 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SXB0_SOYBN1.329e-3869.60Putative uncharacterized protein OS=Glycine max PE... [more]
B9GYP5_POPTR2.778e-2855.91Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T0M0_RICCO2.691e-2348.82Vesicle-associated membrane protein, putative OS=R... [more]
Q9LVU1_ARATH3.636e-2053.26Putative VAMP (Vesicle-associated membrane protein... [more]
D7MPW2_ARALY1.058e-1952.17Vesicle-associated membrane family protein OS=Arab... [more]
Q84XQ0_BRARP1.805e-1950.00Putative VAMP-associated protein (Fragment) OS=Bra... [more]
Q2A9M0_BRAOL1.805e-1950.00Vesicle-associated membrane protein, putative OS=B... [more]
C4J925_MAIZE8.383e-1743.48Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C0PIM8_MAIZE8.383e-1743.48Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C0HE97_MAIZE8.383e-1743.48Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GR395731 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G47180.22.466e-2253.26| Symbols: | Plant VAMP (vesicle-associated membr... [more]
AT5G47180.12.466e-2253.26| Symbols: | Plant VAMP (vesicle-associated membr... [more]
AT3G60600.11.188e-825.00| Symbols: VAP27-1, VAP, (AT)VAP, VAP27 | vesicle ... [more]
AT2G45140.13.457e-828.89| Symbols: PVA12 | plant VAP homolog 12 | chr2:186... [more]
AT4G00170.11.716e-730.40| Symbols: | Plant VAMP (vesicle-associated membr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 104..120
score
NoneNo IPR availableSEGsegsegcoord: 79..105
score
NoneNo IPR availableSEGsegsegcoord: 19..37
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR395731 ID=GR395731; Name=GR395731; organism=Cicer arietinum; type=EST; length=711bp
TATAGTGAATCCAAATACTGATGTTGATGATCTTCCACCAGATACTTTTA
ATAAGGATAGTGGTAATTCAATAGAGGATTTGAAACTACGAGTCTCATAT
ATCACTCCCACCTCACCCGAAGGAAGCTCTGAAGATGATGCAGCAAAGAA
TTCCTCACAAAAACTCAATTCCTCTTCCGCTGTACAGCTCCTGAAGGAAG
AAAGAGAAGCCGCTGTCAGACAAACACGACAGCTTCAACAAGAACTGGAC
TTGCTGAAAAGGCATAGAAGCCGGAGAGGCGATCCTGGCTTTTCGTTCAC
CTTCGCCATTTTTGTTGGTCTACTTGGAACTTTGCTTGGCTTTCTAGTGA
AATTTTTATTCTCCTCGCCATCTACAGAATAATTAACACTGTTTTGAAAC
CTTTGCATGCGTGCATACTTCCCGCGTTGATCACTGTAAAAGTGTAAAGA
TCTATATTTCTTTTAAAAGTGTAAACCTTTGTTTAAATACTCCTAATACA
ACTATTAAGTCCTCCTGCTTTGATTCCCACCCCTTTTCTCTCACCCATAC
TCCCCGCCGCTCAGTTTGTCTAACCATATACGTGACCCTTCCTCATAATT
TGCATCCAACCCTTTTGAGACCATTCTTACTCTTTCACCCACTATATACT
CTGCTTCCCTTATTTATCCTCCTATCAACCCTTTCTGTAATATCCCTTAT
CAATTCCCCAC
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